RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 RTL5Q5HYW3 569 aaPredicted RBP16.98■□□□□ 0.31
PBRM1-219ENST00000462207 CLEC4GQ6UXB4 293 aa16.98■□□□□ 0.31
PBRM1-219ENST00000462207 CCDC191Q8NCU4 936 aa16.98■□□□□ 0.31
PBRM1-219ENST00000462207 GRM8O00222 908 aa16.98■□□□□ 0.31
PBRM1-219ENST00000462207 TRIM28Q13263 835 aaKnown RBP16.98■□□□□ 0.31
PBRM1-219ENST00000462207 C9orf78Q9NZ63 289 aaPredicted RBP16.98■□□□□ 0.31
PBRM1-219ENST00000462207 COL24A1Q17RW2 1714 aa16.97■□□□□ 0.31
PBRM1-219ENST00000462207 UBE3BQ7Z3V4 1068 aa16.97■□□□□ 0.31
PBRM1-219ENST00000462207 FLAD1Q8NFF5 587 aa16.97■□□□□ 0.31
PBRM1-219ENST00000462207 RGL2O15211 777 aa16.96■□□□□ 0.31
PBRM1-219ENST00000462207 UBTFL1P0CB47 393 aaPredicted RBP16.96■□□□□ 0.31
PBRM1-219ENST00000462207 SUSD4Q5VX71 490 aa16.96■□□□□ 0.31
PBRM1-219ENST00000462207 IBTKQ9P2D0 1353 aaPredicted RBP16.96■□□□□ 0.31
PBRM1-219ENST00000462207 NFIXQ14938 502 aa16.96■□□□□ 0.3
PBRM1-219ENST00000462207 MSL1Q68DK7 614 aa16.96■□□□□ 0.3
PBRM1-219ENST00000462207 SYNE4Q8N205 404 aa16.96■□□□□ 0.3
PBRM1-219ENST00000462207 UTYO14607 1347 aa16.95■□□□□ 0.3
PBRM1-219ENST00000462207 GNAI3P08754 354 aa16.95■□□□□ 0.3
PBRM1-219ENST00000462207 CASP7P55210 303 aa16.95■□□□□ 0.3
PBRM1-219ENST00000462207 SUCLG2Q96I99 432 aa16.95■□□□□ 0.3
PBRM1-219ENST00000462207 PCDHB15Q9Y5E8 787 aa16.95■□□□□ 0.3
PBRM1-219ENST00000462207 LRRFIP2Q9Y608 721 aaKnown RBP16.95■□□□□ 0.3
PBRM1-219ENST00000462207 FAM89AQ96GI7 184 aa16.94■□□□□ 0.3
PBRM1-219ENST00000462207 H7C1W4 665 aa16.94■□□□□ 0.3
PBRM1-219ENST00000462207 NTSR2O95665 410 aa16.94■□□□□ 0.3
PBRM1-219ENST00000462207 PARP10Q53GL7 1025 aa16.94■□□□□ 0.3
PBRM1-219ENST00000462207 KAZALD1Q96I82 304 aa16.94■□□□□ 0.3
PBRM1-219ENST00000462207 TRMT112Q9UI30 125 aaKnown RBP16.94■□□□□ 0.3
PBRM1-219ENST00000462207 GNAI2P04899 355 aa16.93■□□□□ 0.3
PBRM1-219ENST00000462207 PCCAP05165 728 aaPredicted RBP16.93■□□□□ 0.3
PBRM1-219ENST00000462207 R3HDM1Q15032 1099 aaKnown RBP16.93■□□□□ 0.3
PBRM1-219ENST00000462207 NUTM1Q86Y26 1132 aa16.93■□□□□ 0.3
PBRM1-219ENST00000462207 ZBTB38Q8NAP3 1195 aaPredicted RBP16.93■□□□□ 0.3
PBRM1-219ENST00000462207 SETDB2Q96T68 719 aa16.93■□□□□ 0.3
PBRM1-219ENST00000462207 DDR1Q08345 913 aa16.92■□□□□ 0.3
PBRM1-219ENST00000462207 EPHA10Q5JZY3 1008 aa16.92■□□□□ 0.3
PBRM1-219ENST00000462207 UTP14AQ9BVJ6 771 aaKnown RBP16.92■□□□□ 0.3
PBRM1-219ENST00000462207 CHMP4BQ9H444 224 aaKnown RBP16.92■□□□□ 0.3
PBRM1-219ENST00000462207 CARMIL3Q8ND23 1372 aa16.92■□□□□ 0.3
PBRM1-219ENST00000462207 CASZ1Q86V15 1759 aa16.92■□□□□ 0.3
PBRM1-219ENST00000462207 ERICH6BQ5W0A0 696 aa16.92■□□□□ 0.3
PBRM1-219ENST00000462207 ABCC12Q96J65 1359 aa16.91■□□□□ 0.3
PBRM1-219ENST00000462207 PSDA5PKW4 1024 aaPredicted RBP16.91■□□□□ 0.3
PBRM1-219ENST00000462207 TM4SF1P30408 202 aa16.91■□□□□ 0.3
PBRM1-219ENST00000462207 CCDC24Q8N4L8 307 aa16.91■□□□□ 0.3
PBRM1-219ENST00000462207 CEP85Q6P2H3 762 aa16.9■□□□□ 0.3
PBRM1-219ENST00000462207 PPP1R42Q7Z4L9 355 aa16.9■□□□□ 0.3
PBRM1-219ENST00000462207 BICC1Q9H694 974 aaKnown RBP16.9■□□□□ 0.3
PBRM1-219ENST00000462207 SH3TC1Q8TE82 1336 aa16.9■□□□□ 0.3
PBRM1-219ENST00000462207 DDX60Q8IY21 1712 aaKnown RBP16.9■□□□□ 0.3
PBRM1-219ENST00000462207 AAMPQ13685 434 aa16.9■□□□□ 0.3
PBRM1-219ENST00000462207 ERFEQ4G0M1 354 aa16.9■□□□□ 0.3
PBRM1-219ENST00000462207 B4GALNT3Q6L9W6 998 aa16.9■□□□□ 0.3
PBRM1-219ENST00000462207 NBPF5PQ86XG9 351 aaPredicted RBP16.9■□□□□ 0.3
PBRM1-219ENST00000462207 SIRT2Q8IXJ6 389 aa16.9■□□□□ 0.3
PBRM1-219ENST00000462207 PPP4R2Q9NY27 417 aa16.9■□□□□ 0.3
PBRM1-219ENST00000462207 POLRMTO00411 1230 aaKnown RBP16.89■□□□□ 0.29
PBRM1-219ENST00000462207 HCLS1P14317 486 aaPredicted RBP16.89■□□□□ 0.29
PBRM1-219ENST00000462207 LAMB2P55268 1798 aa16.89■□□□□ 0.29
PBRM1-219ENST00000462207 NLGN1Q8N2Q7 840 aa16.89■□□□□ 0.29
PBRM1-219ENST00000462207 ANKRD44Q8N8A2 993 aa16.89■□□□□ 0.29
PBRM1-219ENST00000462207 CDHR2Q9BYE9 1310 aa16.89■□□□□ 0.29
PBRM1-219ENST00000462207 IRS4O14654 1257 aaPredicted RBP16.88■□□□□ 0.29
PBRM1-219ENST00000462207 MMP10P09238 476 aa16.88■□□□□ 0.29
PBRM1-219ENST00000462207 FOXO4P98177 505 aa16.88■□□□□ 0.29
PBRM1-219ENST00000462207 TNRC6CQ9HCJ0 1690 aaKnown RBP16.88■□□□□ 0.29
PBRM1-219ENST00000462207 PNMA6EA0A0J9YXQ4 647 aa16.87■□□□□ 0.29
PBRM1-219ENST00000462207 ZBTB7AO95365 584 aa16.87■□□□□ 0.29
PBRM1-219ENST00000462207 SERPINB2P05120 415 aa16.87■□□□□ 0.29
PBRM1-219ENST00000462207 IGHDP01880 384 aa16.86■□□□□ 0.29
PBRM1-219ENST00000462207 GTF2E1P29083 439 aaPredicted RBP16.86■□□□□ 0.29
PBRM1-219ENST00000462207 PRR5LQ6MZQ0 368 aa16.86■□□□□ 0.29
PBRM1-219ENST00000462207 CNBD1Q8NA66 436 aa16.86■□□□□ 0.29
PBRM1-219ENST00000462207 CCDC136Q96JN2 1154 aa16.86■□□□□ 0.29
PBRM1-219ENST00000462207 NYXQ9GZU5 481 aa16.86■□□□□ 0.29
PBRM1-219ENST00000462207 NRXN2Q9P2S2 1712 aa16.86■□□□□ 0.29
PBRM1-219ENST00000462207 C3orf67Q6ZVT6 689 aa16.86■□□□□ 0.29
PBRM1-219ENST00000462207 CCDC85AQ96PX6 553 aaPredicted RBP16.86■□□□□ 0.29
PBRM1-219ENST00000462207 NPHP1O15259 732 aa16.85■□□□□ 0.29
PBRM1-219ENST00000462207 RABL6Q3YEC7 729 aaPredicted RBP16.85■□□□□ 0.29
PBRM1-219ENST00000462207 LMBR1LQ6UX01 489 aa16.85■□□□□ 0.29
PBRM1-219ENST00000462207 TPTE2Q6XPS3 522 aa16.85■□□□□ 0.29
PBRM1-219ENST00000462207 PLA2G12BQ9BX93 195 aa16.85■□□□□ 0.29
PBRM1-219ENST00000462207 CTSWP56202 376 aa16.84■□□□□ 0.29
PBRM1-219ENST00000462207 ATP8B2P98198 1209 aa16.84■□□□□ 0.29
PBRM1-219ENST00000462207 RPAP2Q8IXW5 612 aaPredicted RBP16.84■□□□□ 0.29
PBRM1-219ENST00000462207 SRGAP3O43295 1099 aa16.84■□□□□ 0.29
PBRM1-219ENST00000462207 PDE8AO60658 829 aa16.84■□□□□ 0.29
PBRM1-219ENST00000462207 MTX1Q13505 466 aa16.84■□□□□ 0.29
PBRM1-219ENST00000462207 SLC16A10Q8TF71 515 aa16.84■□□□□ 0.29
PBRM1-219ENST00000462207 HDAC5Q9UQL6 1122 aa16.84■□□□□ 0.29
PBRM1-219ENST00000462207 CHMP3Q9Y3E7 222 aa16.84■□□□□ 0.29
PBRM1-219ENST00000462207 PARP3Q9Y6F1 533 aa16.84■□□□□ 0.29
PBRM1-219ENST00000462207 MYH3P11055 1940 aa16.83■□□□□ 0.29
PBRM1-219ENST00000462207 FAM161AQ3B820 660 aa16.83■□□□□ 0.28
PBRM1-219ENST00000462207 ATF5Q9Y2D1 282 aaPredicted RBP16.83■□□□□ 0.28
PBRM1-219ENST00000462207 HDAC1Q13547 482 aaPredicted RBP16.82■□□□□ 0.28
PBRM1-219ENST00000462207 COL4A1P02462 1669 aa16.82■□□□□ 0.28
PBRM1-219ENST00000462207 POLA2Q14181 598 aa16.82■□□□□ 0.28
PBRM1-219ENST00000462207 SLC10A5Q5PT55 438 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms