RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 UTP14AQ9BVJ6 771 aaKnown RBP17.16■□□□□ 0.34
C9orf3-210ENST00000462125 TAOK3Q9H2K8 898 aa17.16■□□□□ 0.34
C9orf3-210ENST00000462125 HYPKQ9NX55 129 aa17.16■□□□□ 0.34
C9orf3-210ENST00000462125 GLTPD2A6NH11 291 aa17.15■□□□□ 0.34
C9orf3-210ENST00000462125 ANKRD13DQ6ZTN6 518 aa17.15■□□□□ 0.34
C9orf3-210ENST00000462125 WWC1Q8IX03 1113 aa17.15■□□□□ 0.34
C9orf3-210ENST00000462125 PLBD2Q8NHP8 589 aa17.15■□□□□ 0.34
C9orf3-210ENST00000462125 RNF123Q5XPI4 1314 aa17.15■□□□□ 0.34
C9orf3-210ENST00000462125 CCDC93Q567U6 631 aa17.14■□□□□ 0.33
C9orf3-210ENST00000462125 NLRP10Q86W26 655 aa17.14■□□□□ 0.33
C9orf3-210ENST00000462125 C8orf58Q8NAV2 365 aa17.14■□□□□ 0.33
C9orf3-210ENST00000462125 RTKN2Q8IZC4 609 aa17.13■□□□□ 0.33
C9orf3-210ENST00000462125 NLRP3Q96P20 1036 aa17.13■□□□□ 0.33
C9orf3-210ENST00000462125 CRAMP1Q96RY5 1269 aa17.13■□□□□ 0.33
C9orf3-210ENST00000462125 CHMP4AQ9BY43 222 aa17.13■□□□□ 0.33
C9orf3-210ENST00000462125 RRAGCQ9HB90 399 aa17.13■□□□□ 0.33
C9orf3-210ENST00000462125 FER1L6Q2WGJ9 1857 aa17.13■□□□□ 0.33
C9orf3-210ENST00000462125 ELL2O00472 640 aaPredicted RBP17.12■□□□□ 0.33
C9orf3-210ENST00000462125 CC2D2BQ6DHV5 1058 aa17.12■□□□□ 0.33
C9orf3-210ENST00000462125 ISCA1Q9BUE6 129 aa17.12■□□□□ 0.33
C9orf3-210ENST00000462125 ARFGEF2Q9Y6D5 1785 aa17.11■□□□□ 0.33
C9orf3-210ENST00000462125 FKBP4Q02790 459 aaKnown RBP eCLIP17.11■□□□□ 0.33
C9orf3-210ENST00000462125 TRIM28Q13263 835 aaKnown RBP17.11■□□□□ 0.33
C9orf3-210ENST00000462125 DPY19L2Q6NUT2 758 aa17.11■□□□□ 0.33
C9orf3-210ENST00000462125 C3orf67Q6ZVT6 689 aa17.11■□□□□ 0.33
C9orf3-210ENST00000462125 RPGRQ92834 1020 aaKnown RBP17.11■□□□□ 0.33
C9orf3-210ENST00000462125 RBM17Q96I25 401 aaKnown RBP17.11■□□□□ 0.33
C9orf3-210ENST00000462125 IL16Q14005 1332 aa17.11■□□□□ 0.33
C9orf3-210ENST00000462125 HSPA6P17066 643 aa17.1■□□□□ 0.33
C9orf3-210ENST00000462125 GRIPAP1Q4V328 841 aa17.1■□□□□ 0.33
C9orf3-210ENST00000462125 OLFM4Q6UX06 510 aa17.1■□□□□ 0.33
C9orf3-210ENST00000462125 RBM46Q8TBY0 533 aaKnown RBP17.1■□□□□ 0.33
C9orf3-210ENST00000462125 VEGFAP15692 232 aaPredicted RBP17.09■□□□□ 0.33
C9orf3-210ENST00000462125 CCDC30Q5VVM6 783 aa17.09■□□□□ 0.33
C9orf3-210ENST00000462125 SYNE4Q8N205 404 aa17.09■□□□□ 0.33
C9orf3-210ENST00000462125 TSPYL6Q8N831 410 aa17.09■□□□□ 0.33
C9orf3-210ENST00000462125 PHAXQ9H814 394 aaKnown RBP17.09■□□□□ 0.33
C9orf3-210ENST00000462125 TRMT112Q9UI30 125 aaKnown RBP17.09■□□□□ 0.33
C9orf3-210ENST00000462125 SH3TC1Q8TE82 1336 aa17.09■□□□□ 0.33
C9orf3-210ENST00000462125 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
C9orf3-210ENST00000462125 CCDC88AQ3V6T2 1871 aa17.08■□□□□ 0.33
C9orf3-210ENST00000462125 SNED1Q8TER0 1413 aa17.08■□□□□ 0.32
C9orf3-210ENST00000462125 POTECB2RU33 542 aa17.08■□□□□ 0.32
C9orf3-210ENST00000462125 WDR63Q8IWG1 891 aa17.08■□□□□ 0.32
C9orf3-210ENST00000462125 TSR2Q969E8 191 aaKnown RBP17.08■□□□□ 0.32
C9orf3-210ENST00000462125 PSMD1Q99460 953 aa17.08■□□□□ 0.32
C9orf3-210ENST00000462125 CAPN15O75808 1086 aa17.07■□□□□ 0.32
C9orf3-210ENST00000462125 C16orf71Q8IYS4 520 aaPredicted RBP17.07■□□□□ 0.32
C9orf3-210ENST00000462125 ATP5J2-PTCD1G3V325 749 aa17.06■□□□□ 0.32
C9orf3-210ENST00000462125 BBOX1O75936 387 aa17.06■□□□□ 0.32
C9orf3-210ENST00000462125 HCLS1P14317 486 aaPredicted RBP17.06■□□□□ 0.32
C9orf3-210ENST00000462125 FSTL1Q12841 308 aa17.06■□□□□ 0.32
C9orf3-210ENST00000462125 RIC3Q7Z5B4 369 aa17.06■□□□□ 0.32
C9orf3-210ENST00000462125 ZNF277Q9NRM2 450 aaPredicted RBP17.06■□□□□ 0.32
C9orf3-210ENST00000462125 DICER1Q9UPY3 1922 aaKnown RBP17.06■□□□□ 0.32
C9orf3-210ENST00000462125 GOLGA2Q08379 1002 aa17.05■□□□□ 0.32
C9orf3-210ENST00000462125 ATP6V0A2Q9Y487 856 aa17.05■□□□□ 0.32
C9orf3-210ENST00000462125 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
C9orf3-210ENST00000462125 PPEF1O14829 653 aaPredicted RBP17.04■□□□□ 0.32
C9orf3-210ENST00000462125 DDNO94850 711 aaPredicted RBP17.04■□□□□ 0.32
C9orf3-210ENST00000462125 IARSP41252 1262 aaKnown RBP17.04■□□□□ 0.32
C9orf3-210ENST00000462125 SF3B3Q15393 1217 aaKnown RBP17.04■□□□□ 0.32
C9orf3-210ENST00000462125 FAM89AQ96GI7 184 aa17.04■□□□□ 0.32
C9orf3-210ENST00000462125 ANKRD36CQ5JPF3 1778 aa17.04■□□□□ 0.32
C9orf3-210ENST00000462125 ABCC4O15439 1325 aa17.03■□□□□ 0.32
C9orf3-210ENST00000462125 FZD9O00144 591 aa17.03■□□□□ 0.32
C9orf3-210ENST00000462125 TWISTNBQ3B726 338 aaPredicted RBP17.03■□□□□ 0.32
C9orf3-210ENST00000462125 SP8Q8IXZ3 490 aa17.03■□□□□ 0.32
C9orf3-210ENST00000462125 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.32
C9orf3-210ENST00000462125 DDX46Q7L014 1031 aaKnown RBP17.02■□□□□ 0.32
C9orf3-210ENST00000462125 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.32
C9orf3-210ENST00000462125 ZBTB38Q8NAP3 1195 aaPredicted RBP17.02■□□□□ 0.32
C9orf3-210ENST00000462125 CCDC191Q8NCU4 936 aa17.02■□□□□ 0.32
C9orf3-210ENST00000462125 METTL22Q9BUU2 404 aaPredicted RBP17.02■□□□□ 0.32
C9orf3-210ENST00000462125 VPS33BQ9H267 617 aa17.02■□□□□ 0.32
C9orf3-210ENST00000462125 TIAM2Q8IVF5 1701 aa17.01■□□□□ 0.31
C9orf3-210ENST00000462125 WDR90Q96KV7 1748 aa17.01■□□□□ 0.31
C9orf3-210ENST00000462125 APLP1P51693 650 aa17.01■□□□□ 0.31
C9orf3-210ENST00000462125 GRAPQ13588 217 aa17.01■□□□□ 0.31
C9orf3-210ENST00000462125 KSR2Q6VAB6 950 aa17.01■□□□□ 0.31
C9orf3-210ENST00000462125 SMC1BQ8NDV3 1235 aa17.01■□□□□ 0.31
C9orf3-210ENST00000462125 GRAPLQ8TC17 118 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-210ENST00000462125 L3MBTL3Q96JM7 780 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-210ENST00000462125 MYD88Q99836 296 aa17.01■□□□□ 0.31
C9orf3-210ENST00000462125 STK31Q9BXU1 1019 aa17.01■□□□□ 0.31
C9orf3-210ENST00000462125 RTFDC1Q9BY42 306 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-210ENST00000462125 TMX4Q9H1E5 349 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-210ENST00000462125 SALL2Q9Y467 1007 aaPredicted RBP17.01■□□□□ 0.31
C9orf3-210ENST00000462125 FANCIQ9NVI1 1328 aa17■□□□□ 0.31
C9orf3-210ENST00000462125 IRS4O14654 1257 aaPredicted RBP17■□□□□ 0.31
C9orf3-210ENST00000462125 TCERG1O14776 1098 aaKnown RBP17■□□□□ 0.31
C9orf3-210ENST00000462125 VAMP4O75379 141 aa17■□□□□ 0.31
C9orf3-210ENST00000462125 TMC4Q7Z404 712 aa17■□□□□ 0.31
C9orf3-210ENST00000462125 SLC51AQ86UW1 340 aa17■□□□□ 0.31
C9orf3-210ENST00000462125 ZNF428Q96B54 188 aa17■□□□□ 0.31
C9orf3-210ENST00000462125 PI4KAP2A4QPH2 592 aa16.99■□□□□ 0.31
C9orf3-210ENST00000462125 SLC4A2P04920 1241 aa16.99■□□□□ 0.31
C9orf3-210ENST00000462125 PI4KAP1Q8N8J0 262 aa16.99■□□□□ 0.31
C9orf3-210ENST00000462125 JDP2Q8WYK2 163 aa16.99■□□□□ 0.31
C9orf3-210ENST00000462125 IQCA1LA6NCM1 817 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms