RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 COL11A2P13942 1736 aaPredicted RBP13.1□□□□□ -0.31
SPTAN1-204ENST00000461855 FAM177BA6PVY3 158 aa13.09□□□□□ -0.31
SPTAN1-204ENST00000461855 NPR1P16066 1061 aa13.09□□□□□ -0.31
SPTAN1-204ENST00000461855 NPHP1O15259 732 aa13.08□□□□□ -0.32
SPTAN1-204ENST00000461855 GTF2E1P29083 439 aaPredicted RBP13.08□□□□□ -0.32
SPTAN1-204ENST00000461855 SLFN5Q08AF3 891 aa13.08□□□□□ -0.32
SPTAN1-204ENST00000461855 ARHGAP27Q6ZUM4 889 aa13.08□□□□□ -0.32
SPTAN1-204ENST00000461855 ZNF784Q8NCA9 323 aaPredicted RBP13.08□□□□□ -0.32
SPTAN1-204ENST00000461855 ZNF622Q969S3 477 aaKnown RBP eCLIP13.08□□□□□ -0.32
SPTAN1-204ENST00000461855 ANKRD36CQ5JPF3 1778 aa13.07□□□□□ -0.32
SPTAN1-204ENST00000461855 E9PSI1 815 aa13.07□□□□□ -0.32
SPTAN1-204ENST00000461855 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
SPTAN1-204ENST00000461855 KSR2Q6VAB6 950 aa13.07□□□□□ -0.32
SPTAN1-204ENST00000461855 G2E3Q7L622 706 aa13.07□□□□□ -0.32
SPTAN1-204ENST00000461855 RIC3Q7Z5B4 369 aa13.07□□□□□ -0.32
SPTAN1-204ENST00000461855 METTL22Q9BUU2 404 aaPredicted RBP13.07□□□□□ -0.32
SPTAN1-204ENST00000461855 STK31Q9BXU1 1019 aa13.07□□□□□ -0.32
SPTAN1-204ENST00000461855 TNRC6CQ9HCJ0 1690 aaKnown RBP13.06□□□□□ -0.32
SPTAN1-204ENST00000461855 DDX58O95786 925 aaKnown RBP13.06□□□□□ -0.32
SPTAN1-204ENST00000461855 ALDH1B1P30837 517 aa13.06□□□□□ -0.32
SPTAN1-204ENST00000461855 PRPF40BQ6NWY9 871 aaKnown RBP13.06□□□□□ -0.32
SPTAN1-204ENST00000461855 C3orf67Q6ZVT6 689 aa13.06□□□□□ -0.32
SPTAN1-204ENST00000461855 CRAMP1Q96RY5 1269 aa13.06□□□□□ -0.32
SPTAN1-204ENST00000461855 SH3TC1Q8TE82 1336 aa13.06□□□□□ -0.32
SPTAN1-204ENST00000461855 LTBP3Q9NS15 1303 aa13.06□□□□□ -0.32
SPTAN1-204ENST00000461855 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
SPTAN1-204ENST00000461855 SLX4Q8IY92 1834 aa13.05□□□□□ -0.32
SPTAN1-204ENST00000461855 PI4KAP2A4QPH2 592 aa13.05□□□□□ -0.32
SPTAN1-204ENST00000461855 ATP5J2-PTCD1G3V325 749 aa13.05□□□□□ -0.32
SPTAN1-204ENST00000461855 NFKBIEO00221 500 aa13.05□□□□□ -0.32
SPTAN1-204ENST00000461855 TCERG1O14776 1098 aaKnown RBP13.05□□□□□ -0.32
SPTAN1-204ENST00000461855 PRELPP51888 382 aa13.05□□□□□ -0.32
SPTAN1-204ENST00000461855 FLIIQ13045 1269 aa13.05□□□□□ -0.32
SPTAN1-204ENST00000461855 SYNE4Q8N205 404 aa13.05□□□□□ -0.32
SPTAN1-204ENST00000461855 PI4KAP1Q8N8J0 262 aa13.05□□□□□ -0.32
SPTAN1-204ENST00000461855 CCDC191Q8NCU4 936 aa13.05□□□□□ -0.32
SPTAN1-204ENST00000461855 NLRP3Q96P20 1036 aa13.05□□□□□ -0.32
SPTAN1-204ENST00000461855 TRMT112Q9UI30 125 aaKnown RBP13.05□□□□□ -0.32
SPTAN1-204ENST00000461855 ARFGEF2Q9Y6D5 1785 aa13.04□□□□□ -0.32
SPTAN1-204ENST00000461855 C21orf2O43822 256 aa13.04□□□□□ -0.32
SPTAN1-204ENST00000461855 IGKV5-2P06315 115 aa13.04□□□□□ -0.32
SPTAN1-204ENST00000461855 SF3B3Q15393 1217 aaKnown RBP13.04□□□□□ -0.32
SPTAN1-204ENST00000461855 SOGA3Q5TF21 947 aa13.04□□□□□ -0.32
SPTAN1-204ENST00000461855 ZBTB38Q8NAP3 1195 aaPredicted RBP13.04□□□□□ -0.32
SPTAN1-204ENST00000461855 CDCA7LQ96GN5 454 aa13.04□□□□□ -0.32
SPTAN1-204ENST00000461855 MYD88Q99836 296 aa13.04□□□□□ -0.32
SPTAN1-204ENST00000461855 MAP3K2Q9Y2U5 619 aa13.04□□□□□ -0.32
SPTAN1-204ENST00000461855 CACNA1FO60840 1977 aa13.03□□□□□ -0.32
SPTAN1-204ENST00000461855 C9orf131Q5VYM1 1079 aa13.03□□□□□ -0.32
SPTAN1-204ENST00000461855 ZNF428Q96B54 188 aa13.03□□□□□ -0.32
SPTAN1-204ENST00000461855 FAM89AQ96GI7 184 aa13.03□□□□□ -0.32
SPTAN1-204ENST00000461855 PCCAP05165 728 aaPredicted RBP13.02□□□□□ -0.33
SPTAN1-204ENST00000461855 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
SPTAN1-204ENST00000461855 LMNB1P20700 586 aa13.02□□□□□ -0.33
SPTAN1-204ENST00000461855 RBM17Q96I25 401 aaKnown RBP13.02□□□□□ -0.33
SPTAN1-204ENST00000461855 ZC3H4Q9UPT8 1303 aaKnown RBP13.02□□□□□ -0.33
SPTAN1-204ENST00000461855 RASSF7Q02833 373 aa13.01□□□□□ -0.33
SPTAN1-204ENST00000461855 CCDC93Q567U6 631 aa13.01□□□□□ -0.33
SPTAN1-204ENST00000461855 CC2D2BQ6DHV5 1058 aa13.01□□□□□ -0.33
SPTAN1-204ENST00000461855 RPGRQ92834 1020 aaKnown RBP13.01□□□□□ -0.33
SPTAN1-204ENST00000461855 CWC25Q9NXE8 425 aaPredicted RBP13.01□□□□□ -0.33
SPTAN1-204ENST00000461855 SBF1O95248 1867 aa13.01□□□□□ -0.33
SPTAN1-204ENST00000461855 CACNA1SQ13698 1873 aa13.01□□□□□ -0.33
SPTAN1-204ENST00000461855 FER1L6Q2WGJ9 1857 aa13.01□□□□□ -0.33
SPTAN1-204ENST00000461855 CDHR2Q9BYE9 1310 aa13□□□□□ -0.33
SPTAN1-204ENST00000461855 NEURL1BA8MQ27 555 aa13□□□□□ -0.33
SPTAN1-204ENST00000461855 H7C1W4 665 aa13□□□□□ -0.33
SPTAN1-204ENST00000461855 IRS4O14654 1257 aaPredicted RBP13□□□□□ -0.33
SPTAN1-204ENST00000461855 BBOX1O75936 387 aa13□□□□□ -0.33
SPTAN1-204ENST00000461855 CT47B1P0C2W7 299 aaPredicted RBP13□□□□□ -0.33
SPTAN1-204ENST00000461855 GRIPAP1Q4V328 841 aa13□□□□□ -0.33
SPTAN1-204ENST00000461855 RTKN2Q8IZC4 609 aa13□□□□□ -0.33
SPTAN1-204ENST00000461855 DNAAF4Q8WXU2 420 aa13□□□□□ -0.33
SPTAN1-204ENST00000461855 ABCC4O15439 1325 aa12.99□□□□□ -0.33
SPTAN1-204ENST00000461855 HSP90B1P14625 803 aaKnown RBP12.99□□□□□ -0.33
SPTAN1-204ENST00000461855 CASP7P55210 303 aa12.99□□□□□ -0.33
SPTAN1-204ENST00000461855 NEXNQ0ZGT2 675 aa12.99□□□□□ -0.33
SPTAN1-204ENST00000461855 FKBP5Q13451 457 aaPredicted RBP12.99□□□□□ -0.33
SPTAN1-204ENST00000461855 OLFM4Q6UX06 510 aa12.99□□□□□ -0.33
SPTAN1-204ENST00000461855 MRPL50Q8N5N7 158 aaKnown RBP12.99□□□□□ -0.33
SPTAN1-204ENST00000461855 LINS1Q8NG48 757 aa12.99□□□□□ -0.33
SPTAN1-204ENST00000461855 PSMD1Q99460 953 aa12.99□□□□□ -0.33
SPTAN1-204ENST00000461855 TAOK3Q9H2K8 898 aa12.99□□□□□ -0.33
SPTAN1-204ENST00000461855 RNF181Q9P0P0 153 aa12.99□□□□□ -0.33
SPTAN1-204ENST00000461855 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
SPTAN1-204ENST00000461855 BRPF1P55201 1214 aaPredicted RBP12.98□□□□□ -0.33
SPTAN1-204ENST00000461855 FKBP4Q02790 459 aaKnown RBP eCLIP12.98□□□□□ -0.33
SPTAN1-204ENST00000461855 GRAPQ13588 217 aa12.98□□□□□ -0.33
SPTAN1-204ENST00000461855 GCKRQ14397 625 aa12.98□□□□□ -0.33
SPTAN1-204ENST00000461855 CWF19L2Q2TBE0 894 aaKnown RBP12.98□□□□□ -0.33
SPTAN1-204ENST00000461855 ALDH1L2Q3SY69 923 aa12.98□□□□□ -0.33
SPTAN1-204ENST00000461855 BEND3Q5T5X7 828 aa12.98□□□□□ -0.33
SPTAN1-204ENST00000461855 GRAPLQ8TC17 118 aaPredicted RBP12.98□□□□□ -0.33
SPTAN1-204ENST00000461855 ZNF219Q9P2Y4 722 aaPredicted RBP12.98□□□□□ -0.33
SPTAN1-204ENST00000461855 ATP6V0A2Q9Y487 856 aa12.98□□□□□ -0.33
SPTAN1-204ENST00000461855 LAMB2P55268 1798 aa12.97□□□□□ -0.33
SPTAN1-204ENST00000461855 PPEF1O14829 653 aaPredicted RBP12.97□□□□□ -0.33
SPTAN1-204ENST00000461855 PDE8AO60658 829 aa12.97□□□□□ -0.33
SPTAN1-204ENST00000461855 DDX46Q7L014 1031 aaKnown RBP12.97□□□□□ -0.33
SPTAN1-204ENST00000461855 SP8Q8IXZ3 490 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms