RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 RBM46Q8TBY0 533 aaKnown RBP17.89■□□□□ 0.45
RBM39-222ENST00000461849 XAGE3Q8WTP9 111 aa17.89■□□□□ 0.45
RBM39-222ENST00000461849 TNRC6CQ9HCJ0 1690 aaKnown RBP17.89■□□□□ 0.45
RBM39-222ENST00000461849 TIAM2Q8IVF5 1701 aa17.89■□□□□ 0.45
RBM39-222ENST00000461849 GNAI1P63096 354 aa17.88■□□□□ 0.45
RBM39-222ENST00000461849 RTKN2Q8IZC4 609 aa17.88■□□□□ 0.45
RBM39-222ENST00000461849 UTP14AQ9BVJ6 771 aaKnown RBP17.88■□□□□ 0.45
RBM39-222ENST00000461849 MBIPQ9NS73 344 aa17.88■□□□□ 0.45
RBM39-222ENST00000461849 CHPF2Q9P2E5 772 aa17.88■□□□□ 0.45
RBM39-222ENST00000461849 ABCC12Q96J65 1359 aa17.88■□□□□ 0.45
RBM39-222ENST00000461849 NTSR2O95665 410 aa17.87■□□□□ 0.45
RBM39-222ENST00000461849 VEGFAP15692 232 aaPredicted RBP17.87■□□□□ 0.45
RBM39-222ENST00000461849 RBM17Q96I25 401 aaKnown RBP17.87■□□□□ 0.45
RBM39-222ENST00000461849 NLRP3Q96P20 1036 aa17.87■□□□□ 0.45
RBM39-222ENST00000461849 IFT57Q9NWB7 429 aa17.87■□□□□ 0.45
RBM39-222ENST00000461849 DBF4Q9UBU7 674 aaPredicted RBP17.87■□□□□ 0.45
RBM39-222ENST00000461849 FKBP4Q02790 459 aaKnown RBP eCLIP17.86■□□□□ 0.45
RBM39-222ENST00000461849 CRY2Q49AN0 593 aa17.86■□□□□ 0.45
RBM39-222ENST00000461849 DUSP27Q5VZP5 1158 aa17.86■□□□□ 0.45
RBM39-222ENST00000461849 C7orf43Q8WVR3 580 aa17.86■□□□□ 0.45
RBM39-222ENST00000461849 RIC1Q4ADV7 1423 aa17.85■□□□□ 0.45
RBM39-222ENST00000461849 TMX4Q9H1E5 349 aaPredicted RBP17.85■□□□□ 0.45
RBM39-222ENST00000461849 DICER1Q9UPY3 1922 aaKnown RBP17.84■□□□□ 0.45
RBM39-222ENST00000461849 RNF123Q5XPI4 1314 aa17.84■□□□□ 0.45
RBM39-222ENST00000461849 ZNF853P0CG23 659 aa17.84■□□□□ 0.45
RBM39-222ENST00000461849 APLP1P51693 650 aa17.84■□□□□ 0.45
RBM39-222ENST00000461849 FSTL1Q12841 308 aa17.84■□□□□ 0.45
RBM39-222ENST00000461849 TCIRG1Q13488 830 aa17.84■□□□□ 0.45
RBM39-222ENST00000461849 HYPKQ9NX55 129 aa17.84■□□□□ 0.45
RBM39-222ENST00000461849 CC2D2BQ6DHV5 1058 aa17.83■□□□□ 0.44
RBM39-222ENST00000461849 OLFM4Q6UX06 510 aa17.83■□□□□ 0.44
RBM39-222ENST00000461849 ANKRD13DQ6ZTN6 518 aa17.83■□□□□ 0.44
RBM39-222ENST00000461849 WWC1Q8IX03 1113 aa17.83■□□□□ 0.44
RBM39-222ENST00000461849 SMC1BQ8NDV3 1235 aa17.83■□□□□ 0.44
RBM39-222ENST00000461849 PLBD2Q8NHP8 589 aa17.83■□□□□ 0.44
RBM39-222ENST00000461849 CHMP4AQ9BY43 222 aa17.83■□□□□ 0.44
RBM39-222ENST00000461849 ZNF277Q9NRM2 450 aaPredicted RBP17.83■□□□□ 0.44
RBM39-222ENST00000461849 TRMT112Q9UI30 125 aaKnown RBP17.83■□□□□ 0.44
RBM39-222ENST00000461849 ZNF521Q96K83 1311 aa17.82■□□□□ 0.44
RBM39-222ENST00000461849 ELL2O00472 640 aaPredicted RBP17.82■□□□□ 0.44
RBM39-222ENST00000461849 HOXA10P31260 410 aaPredicted RBP17.82■□□□□ 0.44
RBM39-222ENST00000461849 HNRNPUQ00839 825 aaKnown RBP eCLIP17.82■□□□□ 0.44
RBM39-222ENST00000461849 NLRP10Q86W26 655 aa17.82■□□□□ 0.44
RBM39-222ENST00000461849 CRAMP1Q96RY5 1269 aa17.82■□□□□ 0.44
RBM39-222ENST00000461849 PPEF1O14829 653 aaPredicted RBP17.81■□□□□ 0.44
RBM39-222ENST00000461849 GRIPAP1Q4V328 841 aa17.81■□□□□ 0.44
RBM39-222ENST00000461849 SLC10A5Q5PT55 438 aa17.81■□□□□ 0.44
RBM39-222ENST00000461849 SYNE4Q8N205 404 aa17.81■□□□□ 0.44
RBM39-222ENST00000461849 ANKRD36CQ5JPF3 1778 aa17.81■□□□□ 0.44
RBM39-222ENST00000461849 IL16Q14005 1332 aa17.8■□□□□ 0.44
RBM39-222ENST00000461849 SH3TC1Q8TE82 1336 aa17.8■□□□□ 0.44
RBM39-222ENST00000461849 TCERG1O14776 1098 aaKnown RBP17.8■□□□□ 0.44
RBM39-222ENST00000461849 IARSP41252 1262 aaKnown RBP17.8■□□□□ 0.44
RBM39-222ENST00000461849 WDR63Q8IWG1 891 aa17.8■□□□□ 0.44
RBM39-222ENST00000461849 PSMD1Q99460 953 aa17.8■□□□□ 0.44
RBM39-222ENST00000461849 ZBED9Q6R2W3 1325 aa17.79■□□□□ 0.44
RBM39-222ENST00000461849 DDNO94850 711 aaPredicted RBP17.79■□□□□ 0.44
RBM39-222ENST00000461849 GOLGA2Q08379 1002 aa17.79■□□□□ 0.44
RBM39-222ENST00000461849 RIC3Q7Z5B4 369 aa17.79■□□□□ 0.44
RBM39-222ENST00000461849 JDP2Q8WYK2 163 aa17.79■□□□□ 0.44
RBM39-222ENST00000461849 WDR90Q96KV7 1748 aa17.78■□□□□ 0.44
RBM39-222ENST00000461849 IQCA1LA6NCM1 817 aa17.78■□□□□ 0.44
RBM39-222ENST00000461849 HCLS1P14317 486 aaPredicted RBP17.78■□□□□ 0.44
RBM39-222ENST00000461849 C3orf67Q6ZVT6 689 aa17.78■□□□□ 0.44
RBM39-222ENST00000461849 ATP5J2-PTCD1G3V325 749 aa17.77■□□□□ 0.44
RBM39-222ENST00000461849 CCDC30Q5VVM6 783 aa17.77■□□□□ 0.44
RBM39-222ENST00000461849 DDX46Q7L014 1031 aaKnown RBP17.77■□□□□ 0.44
RBM39-222ENST00000461849 C8orf58Q8NAV2 365 aa17.77■□□□□ 0.44
RBM39-222ENST00000461849 ZNF428Q96B54 188 aa17.77■□□□□ 0.44
RBM39-222ENST00000461849 SALL2Q9Y467 1007 aaPredicted RBP17.77■□□□□ 0.44
RBM39-222ENST00000461849 ABCC4O15439 1325 aa17.76■□□□□ 0.43
RBM39-222ENST00000461849 POTECB2RU33 542 aa17.76■□□□□ 0.43
RBM39-222ENST00000461849 ISCA1Q9BUE6 129 aa17.76■□□□□ 0.43
RBM39-222ENST00000461849 BBOX1O75936 387 aa17.75■□□□□ 0.43
RBM39-222ENST00000461849 DDX58O95786 925 aaKnown RBP17.75■□□□□ 0.43
RBM39-222ENST00000461849 PHAXQ9H814 394 aaKnown RBP17.75■□□□□ 0.43
RBM39-222ENST00000461849 ATP6V0A2Q9Y487 856 aa17.75■□□□□ 0.43
RBM39-222ENST00000461849 EIF6P56537 245 aaKnown RBP17.74■□□□□ 0.43
RBM39-222ENST00000461849 LARGE2Q8N3Y3 721 aa17.74■□□□□ 0.43
RBM39-222ENST00000461849 TSR2Q969E8 191 aaKnown RBP17.74■□□□□ 0.43
RBM39-222ENST00000461849 FAM89AQ96GI7 184 aa17.74■□□□□ 0.43
RBM39-222ENST00000461849 FZD9O00144 591 aa17.73■□□□□ 0.43
RBM39-222ENST00000461849 GRAPQ13588 217 aa17.73■□□□□ 0.43
RBM39-222ENST00000461849 SUPT20HQ8NEM7 779 aa17.73■□□□□ 0.43
RBM39-222ENST00000461849 GRAPLQ8TC17 118 aaPredicted RBP17.73■□□□□ 0.43
RBM39-222ENST00000461849 L3MBTL3Q96JM7 780 aaPredicted RBP17.73■□□□□ 0.43
RBM39-222ENST00000461849 STK31Q9BXU1 1019 aa17.73■□□□□ 0.43
RBM39-222ENST00000461849 ZNF541Q9H0D2 1346 aa17.72■□□□□ 0.43
RBM39-222ENST00000461849 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
RBM39-222ENST00000461849 TRIM28Q13263 835 aaKnown RBP17.72■□□□□ 0.43
RBM39-222ENST00000461849 RTL5Q5HYW3 569 aaPredicted RBP17.72■□□□□ 0.43
RBM39-222ENST00000461849 DPP8Q6V1X1 898 aaPredicted RBP17.72■□□□□ 0.43
RBM39-222ENST00000461849 SP8Q8IXZ3 490 aa17.72■□□□□ 0.43
RBM39-222ENST00000461849 GPC2Q8N158 579 aa17.72■□□□□ 0.43
RBM39-222ENST00000461849 TSPYL6Q8N831 410 aa17.72■□□□□ 0.43
RBM39-222ENST00000461849 MYD88Q99836 296 aa17.72■□□□□ 0.43
RBM39-222ENST00000461849 SNED1Q8TER0 1413 aa17.72■□□□□ 0.43
RBM39-222ENST00000461849 E9PSI1 815 aa17.71■□□□□ 0.43
RBM39-222ENST00000461849 IRS4O14654 1257 aaPredicted RBP17.71■□□□□ 0.43
RBM39-222ENST00000461849 PPIP5K2O43314 1243 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 259.5 ms