RNA–Protein interactions for RNA: ENST00000461766.1

CDHR3-202, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 536 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-202ENST00000461766 PLA2G2CQ5R387 149 aa6.32□□□□□ -1.4
CDHR3-202ENST00000461766 CCDC94Q9BW85 323 aaPredicted RBP6.32□□□□□ -1.4
CDHR3-202ENST00000461766 CHMP4BQ9H444 224 aaKnown RBP6.32□□□□□ -1.4
CDHR3-202ENST00000461766 ZKSCAN5Q9Y2L8 839 aa6.32□□□□□ -1.4
CDHR3-202ENST00000461766 ABCC11Q96J66 1382 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 ARHGAP5Q13017 1502 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 MED14O60244 1454 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 ZNF518AQ6AHZ1 1483 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 ZBTB24O43167 697 aaPredicted RBP6.31□□□□□ -1.4
CDHR3-202ENST00000461766 RLBP1P12271 317 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 SH3BP2P78314 561 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 RBM10P98175 930 aaKnown RBP6.31□□□□□ -1.4
CDHR3-202ENST00000461766 DMTNQ08495 405 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 TRIM32Q13049 653 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 AGERQ15109 404 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 RGL3Q3MIN7 710 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 ERFEQ4G0M1 354 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 C4orf48Q5BLP8 95 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 BMP2KLQ5H9B9 411 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 PPP1R18Q6NYC8 613 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 DZIP3Q86Y13 1208 aaKnown RBP6.31□□□□□ -1.4
CDHR3-202ENST00000461766 FTSJ3Q8IY81 847 aaKnown RBP6.31□□□□□ -1.4
CDHR3-202ENST00000461766 DZIP1LQ8IYY4 767 aaKnown RBP6.31□□□□□ -1.4
CDHR3-202ENST00000461766 RETREG2Q8NC44 543 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 FAM174AQ8TBP5 190 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 C1QTNF2Q9BXJ5 285 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 GTPBP4Q9BZE4 634 aaKnown RBP6.31□□□□□ -1.4
CDHR3-202ENST00000461766 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.31□□□□□ -1.4
CDHR3-202ENST00000461766 CEP126Q9P2H0 1117 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 R3HCC1Q9Y3T6 440 aaKnown RBP6.31□□□□□ -1.4
CDHR3-202ENST00000461766 DDX49Q9Y6V7 483 aaKnown RBP6.31□□□□□ -1.4
CDHR3-202ENST00000461766 PTPRTO14522 1441 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 NSD2O96028 1365 aa6.31□□□□□ -1.4
CDHR3-202ENST00000461766 USP17L5A8MUK1 530 aa6.3□□□□□ -1.4
CDHR3-202ENST00000461766 KIF20AO95235 890 aa6.3□□□□□ -1.4
CDHR3-202ENST00000461766 SKIP12755 728 aa6.3□□□□□ -1.4
CDHR3-202ENST00000461766 HMGN5P82970 282 aaKnown RBP6.3□□□□□ -1.4
CDHR3-202ENST00000461766 SLFNL1Q499Z3 407 aa6.3□□□□□ -1.4
CDHR3-202ENST00000461766 TAF3Q5VWG9 929 aa6.3□□□□□ -1.4
CDHR3-202ENST00000461766 SLC10A4Q96EP9 437 aa6.3□□□□□ -1.4
CDHR3-202ENST00000461766 PRIMPOLQ96LW4 560 aa6.3□□□□□ -1.4
CDHR3-202ENST00000461766 CFAP53Q96M91 514 aa6.3□□□□□ -1.4
CDHR3-202ENST00000461766 CWC22Q9HCG8 908 aaKnown RBP6.3□□□□□ -1.4
CDHR3-202ENST00000461766 FAM13BQ9NYF5 915 aa6.3□□□□□ -1.4
CDHR3-202ENST00000461766 IL16Q14005 1332 aa6.29□□□□□ -1.4
CDHR3-202ENST00000461766 USP17L3A6NCW0 530 aa6.29□□□□□ -1.4
CDHR3-202ENST00000461766 USP17L4A6NCW7 530 aa6.29□□□□□ -1.4
CDHR3-202ENST00000461766 LETM1O95202 739 aaPredicted RBP6.29□□□□□ -1.4
CDHR3-202ENST00000461766 BAG4O95429 457 aaKnown RBP6.29□□□□□ -1.4
CDHR3-202ENST00000461766 PDIA4P13667 645 aaKnown RBP6.29□□□□□ -1.4
CDHR3-202ENST00000461766 RPIAP49247 311 aa6.29□□□□□ -1.4
CDHR3-202ENST00000461766 WNT7BP56706 349 aa6.29□□□□□ -1.4
CDHR3-202ENST00000461766 NUCB1Q02818 461 aa6.29□□□□□ -1.4
CDHR3-202ENST00000461766 USP17L2Q6R6M4 530 aa6.29□□□□□ -1.4
CDHR3-202ENST00000461766 USP17L1Q7RTZ2 530 aa6.29□□□□□ -1.4
CDHR3-202ENST00000461766 RNF135Q8IUD6 432 aa6.29□□□□□ -1.4
CDHR3-202ENST00000461766 PLEKHM2Q8IWE5 1019 aa6.29□□□□□ -1.4
CDHR3-202ENST00000461766 TRMT44Q8IYL2 757 aaKnown RBP6.29□□□□□ -1.4
CDHR3-202ENST00000461766 VWDEQ8N2E2 1590 aa6.29□□□□□ -1.4
CDHR3-202ENST00000461766 PHTF2Q8N3S3 785 aa6.29□□□□□ -1.4
CDHR3-202ENST00000461766 TRAPPC8Q9Y2L5 1435 aa6.29□□□□□ -1.4
CDHR3-202ENST00000461766 NOS1P29475 1434 aa6.28□□□□□ -1.4
CDHR3-202ENST00000461766 IPO8O15397 1037 aaKnown RBP6.28□□□□□ -1.4
CDHR3-202ENST00000461766 MBD3O95983 291 aa6.28□□□□□ -1.4
CDHR3-202ENST00000461766 GTF2F1P35269 517 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDHR3-202ENST00000461766 HNRNPMP52272 730 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDHR3-202ENST00000461766 KIAA2012Q0VF49 1180 aa6.28□□□□□ -1.4
CDHR3-202ENST00000461766 RABEP1Q15276 862 aa6.28□□□□□ -1.4
CDHR3-202ENST00000461766 ZSCAN23Q3MJ62 389 aa6.28□□□□□ -1.4
CDHR3-202ENST00000461766 TCP11L2Q8N4U5 519 aa6.28□□□□□ -1.4
CDHR3-202ENST00000461766 PLPP7Q8NBV4 271 aa6.28□□□□□ -1.4
CDHR3-202ENST00000461766 MYRIPQ8NFW9 859 aa6.28□□□□□ -1.4
CDHR3-202ENST00000461766 GCC1Q96CN9 775 aa6.28□□□□□ -1.4
CDHR3-202ENST00000461766 ABCC1P33527 1531 aa6.28□□□□□ -1.4
CDHR3-202ENST00000461766 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDHR3-202ENST00000461766 ABCA9Q8IUA7 1624 aa6.28□□□□□ -1.4
CDHR3-202ENST00000461766 NRXN1Q9ULB1 1477 aa6.28□□□□□ -1.4
CDHR3-202ENST00000461766 CDC42BPGQ6DT37 1551 aa6.27□□□□□ -1.41
CDHR3-202ENST00000461766 AK9Q5TCS8 1911 aa6.27□□□□□ -1.41
CDHR3-202ENST00000461766 CYP2E1P05181 493 aaPredicted RBP6.27□□□□□ -1.41
CDHR3-202ENST00000461766 SSFA2P28290 1259 aa6.27□□□□□ -1.41
CDHR3-202ENST00000461766 SKOR1P84550 965 aa6.27□□□□□ -1.41
CDHR3-202ENST00000461766 NBPF20Q3BBV1 942 aa6.27□□□□□ -1.41
CDHR3-202ENST00000461766 LRSAM1Q6UWE0 723 aa6.27□□□□□ -1.41
CDHR3-202ENST00000461766 ATF7IPQ6VMQ6 1270 aa6.27□□□□□ -1.41
CDHR3-202ENST00000461766 CHD1LQ86WJ1 897 aa6.27□□□□□ -1.41
CDHR3-202ENST00000461766 SYAP1Q96A49 352 aaPredicted RBP6.27□□□□□ -1.41
CDHR3-202ENST00000461766 ZNF428Q96B54 188 aa6.27□□□□□ -1.41
CDHR3-202ENST00000461766 TRAIPQ9BWF2 469 aa6.27□□□□□ -1.41
CDHR3-202ENST00000461766 CDV3Q9UKY7 258 aaKnown RBP6.27□□□□□ -1.41
CDHR3-202ENST00000461766 FRMPD1Q5SYB0 1578 aa6.27□□□□□ -1.41
CDHR3-202ENST00000461766 MROH2AA6NES4 1674 aa6.26□□□□□ -1.41
CDHR3-202ENST00000461766 PPLO60437 1756 aa6.26□□□□□ -1.41
CDHR3-202ENST00000461766 ASXL2Q76L83 1435 aa6.26□□□□□ -1.41
CDHR3-202ENST00000461766 NSD3Q9BZ95 1437 aa6.26□□□□□ -1.41
CDHR3-202ENST00000461766 ARAP3Q8WWN8 1544 aa6.26□□□□□ -1.41
CDHR3-202ENST00000461766 LZTS3O60299 673 aaPredicted RBP6.26□□□□□ -1.41
CDHR3-202ENST00000461766 CDC45O75419 566 aa6.26□□□□□ -1.41
CDHR3-202ENST00000461766 ATG7O95352 703 aa6.26□□□□□ -1.41
CDHR3-202ENST00000461766 VARSP26640 1264 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms