RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 KLRG2A4D1S0 409 aaPredicted RBP13.03□□□□□ -0.32
SYN3-206ENST00000461446 NFKBIEO00221 500 aa13.03□□□□□ -0.32
SYN3-206ENST00000461446 PRPF40BQ6NWY9 871 aaKnown RBP13.03□□□□□ -0.32
SYN3-206ENST00000461446 CNKSR1Q969H4 720 aa13.03□□□□□ -0.32
SYN3-206ENST00000461446 ZNF428Q96B54 188 aa13.03□□□□□ -0.32
SYN3-206ENST00000461446 HYPKQ9NX55 129 aa13.03□□□□□ -0.32
SYN3-206ENST00000461446 SLX4Q8IY92 1834 aa13.03□□□□□ -0.32
SYN3-206ENST00000461446 SBF1O95248 1867 aa13.02□□□□□ -0.32
SYN3-206ENST00000461446 TCERG1O14776 1098 aaKnown RBP13.02□□□□□ -0.33
SYN3-206ENST00000461446 CT47B1P0C2W7 299 aaPredicted RBP13.02□□□□□ -0.33
SYN3-206ENST00000461446 NPR1P16066 1061 aa13.02□□□□□ -0.33
SYN3-206ENST00000461446 STK31Q9BXU1 1019 aa13.02□□□□□ -0.33
SYN3-206ENST00000461446 NYXQ9GZU5 481 aa13.02□□□□□ -0.33
SYN3-206ENST00000461446 NTSR2O95665 410 aa13.01□□□□□ -0.33
SYN3-206ENST00000461446 LMNB1P20700 586 aa13.01□□□□□ -0.33
SYN3-206ENST00000461446 OLFM4Q6UX06 510 aa13.01□□□□□ -0.33
SYN3-206ENST00000461446 NMRK2Q9NPI5 230 aa13.01□□□□□ -0.33
SYN3-206ENST00000461446 TNRC6CQ9HCJ0 1690 aaKnown RBP13.01□□□□□ -0.33
SYN3-206ENST00000461446 CACNA1SQ13698 1873 aa13.01□□□□□ -0.33
SYN3-206ENST00000461446 KIF3CO14782 793 aa13□□□□□ -0.33
SYN3-206ENST00000461446 SLC4A2P04920 1241 aa13□□□□□ -0.33
SYN3-206ENST00000461446 C3orf67Q6ZVT6 689 aa13□□□□□ -0.33
SYN3-206ENST00000461446 SYNE4Q8N205 404 aa13□□□□□ -0.33
SYN3-206ENST00000461446 C7orf43Q8WVR3 580 aa13□□□□□ -0.33
SYN3-206ENST00000461446 PHAXQ9H814 394 aaKnown RBP13□□□□□ -0.33
SYN3-206ENST00000461446 TCIRG1Q13488 830 aa12.99□□□□□ -0.33
SYN3-206ENST00000461446 CRY2Q49AN0 593 aa12.99□□□□□ -0.33
SYN3-206ENST00000461446 PARP10Q53GL7 1025 aa12.99□□□□□ -0.33
SYN3-206ENST00000461446 PPP1R42Q7Z4L9 355 aa12.99□□□□□ -0.33
SYN3-206ENST00000461446 NLRP10Q86W26 655 aa12.99□□□□□ -0.33
SYN3-206ENST00000461446 PLBD2Q8NHP8 589 aa12.99□□□□□ -0.33
SYN3-206ENST00000461446 UTP14AQ9BVJ6 771 aaKnown RBP12.99□□□□□ -0.33
SYN3-206ENST00000461446 IBTKQ9P2D0 1353 aaPredicted RBP12.98□□□□□ -0.33
SYN3-206ENST00000461446 CCDC88AQ3V6T2 1871 aa12.98□□□□□ -0.33
SYN3-206ENST00000461446 ALDH1L2Q3SY69 923 aa12.98□□□□□ -0.33
SYN3-206ENST00000461446 ANKRD13DQ6ZTN6 518 aa12.98□□□□□ -0.33
SYN3-206ENST00000461446 SLC51AQ86UW1 340 aa12.98□□□□□ -0.33
SYN3-206ENST00000461446 SSH1Q8WYL5 1049 aa12.98□□□□□ -0.33
SYN3-206ENST00000461446 TAOK3Q9H2K8 898 aa12.98□□□□□ -0.33
SYN3-206ENST00000461446 ATP5J2-PTCD1G3V325 749 aa12.97□□□□□ -0.33
SYN3-206ENST00000461446 HSP90AB3PQ58FF7 597 aa12.97□□□□□ -0.33
SYN3-206ENST00000461446 G2E3Q7L622 706 aa12.97□□□□□ -0.33
SYN3-206ENST00000461446 MRPL50Q8N5N7 158 aaKnown RBP12.97□□□□□ -0.33
SYN3-206ENST00000461446 RPGRQ92834 1020 aaKnown RBP12.97□□□□□ -0.33
SYN3-206ENST00000461446 FER1L6Q2WGJ9 1857 aa12.97□□□□□ -0.33
SYN3-206ENST00000461446 DDX58O95786 925 aaKnown RBP12.96□□□□□ -0.33
SYN3-206ENST00000461446 HCLS1P14317 486 aaPredicted RBP12.96□□□□□ -0.33
SYN3-206ENST00000461446 ALDH1B1P30837 517 aa12.96□□□□□ -0.33
SYN3-206ENST00000461446 HOXA10P31260 410 aaPredicted RBP12.96□□□□□ -0.33
SYN3-206ENST00000461446 RARSP54136 660 aaKnown RBP12.96□□□□□ -0.33
SYN3-206ENST00000461446 FLIIQ13045 1269 aa12.96□□□□□ -0.33
SYN3-206ENST00000461446 CCDC93Q567U6 631 aa12.96□□□□□ -0.33
SYN3-206ENST00000461446 SLC10A5Q5PT55 438 aa12.96□□□□□ -0.33
SYN3-206ENST00000461446 RRAGCQ9HB90 399 aa12.96□□□□□ -0.33
SYN3-206ENST00000461446 TRMT112Q9UI30 125 aaKnown RBP12.96□□□□□ -0.33
SYN3-206ENST00000461446 CACNA1FO60840 1977 aa12.96□□□□□ -0.34
SYN3-206ENST00000461446 ARFGEF2Q9Y6D5 1785 aa12.95□□□□□ -0.34
SYN3-206ENST00000461446 SOGA3Q5TF21 947 aa12.95□□□□□ -0.34
SYN3-206ENST00000461446 NLRP3Q96P20 1036 aa12.95□□□□□ -0.34
SYN3-206ENST00000461446 ISCA1Q9BUE6 129 aa12.95□□□□□ -0.34
SYN3-206ENST00000461446 BCL2L13Q9BXK5 485 aa12.95□□□□□ -0.34
SYN3-206ENST00000461446 ZNF277Q9NRM2 450 aaPredicted RBP12.95□□□□□ -0.34
SYN3-206ENST00000461446 SMC4Q9NTJ3 1288 aa12.95□□□□□ -0.34
SYN3-206ENST00000461446 ANKRD36CQ5JPF3 1778 aa12.94□□□□□ -0.34
SYN3-206ENST00000461446 KDM2BQ8NHM5 1336 aa12.94□□□□□ -0.34
SYN3-206ENST00000461446 LTBP3Q9NS15 1303 aa12.94□□□□□ -0.34
SYN3-206ENST00000461446 BRPF1P55201 1214 aaPredicted RBP12.94□□□□□ -0.34
SYN3-206ENST00000461446 RTL5Q5HYW3 569 aaPredicted RBP12.94□□□□□ -0.34
SYN3-206ENST00000461446 KSR2Q6VAB6 950 aa12.94□□□□□ -0.34
SYN3-206ENST00000461446 RIC3Q7Z5B4 369 aa12.94□□□□□ -0.34
SYN3-206ENST00000461446 RBM17Q96I25 401 aaKnown RBP12.94□□□□□ -0.34
SYN3-206ENST00000461446 RIC1Q4ADV7 1423 aa12.94□□□□□ -0.34
SYN3-206ENST00000461446 SH3TC1Q8TE82 1336 aa12.93□□□□□ -0.34
SYN3-206ENST00000461446 PI4KAP2A4QPH2 592 aa12.93□□□□□ -0.34
SYN3-206ENST00000461446 GLTPD2A6NH11 291 aa12.93□□□□□ -0.34
SYN3-206ENST00000461446 FKBP5Q13451 457 aaPredicted RBP12.93□□□□□ -0.34
SYN3-206ENST00000461446 PI4KAP1Q8N8J0 262 aa12.93□□□□□ -0.34
SYN3-206ENST00000461446 FAM89AQ96GI7 184 aa12.93□□□□□ -0.34
SYN3-206ENST00000461446 CRAMP1Q96RY5 1269 aa12.93□□□□□ -0.34
SYN3-206ENST00000461446 MAP3K2Q9Y2U5 619 aa12.93□□□□□ -0.34
SYN3-206ENST00000461446 ZC3H4Q9UPT8 1303 aaKnown RBP12.92□□□□□ -0.34
SYN3-206ENST00000461446 TOMM70O94826 608 aa12.92□□□□□ -0.34
SYN3-206ENST00000461446 FKBP4Q02790 459 aaKnown RBP eCLIP12.92□□□□□ -0.34
SYN3-206ENST00000461446 TIAM2Q8IVF5 1701 aa12.92□□□□□ -0.34
SYN3-206ENST00000461446 RTKN2Q8IZC4 609 aa12.92□□□□□ -0.34
SYN3-206ENST00000461446 JARID2Q92833 1246 aaPredicted RBP12.92□□□□□ -0.34
SYN3-206ENST00000461446 MYD88Q99836 296 aa12.92□□□□□ -0.34
SYN3-206ENST00000461446 METTL22Q9BUU2 404 aaPredicted RBP12.92□□□□□ -0.34
SYN3-206ENST00000461446 ABCC4O15439 1325 aa12.91□□□□□ -0.34
SYN3-206ENST00000461446 PTPRCP08575 1304 aa12.91□□□□□ -0.34
SYN3-206ENST00000461446 RNF123Q5XPI4 1314 aa12.91□□□□□ -0.34
SYN3-206ENST00000461446 PPEF1O14829 653 aaPredicted RBP12.91□□□□□ -0.34
SYN3-206ENST00000461446 BCAR3O75815 825 aa12.91□□□□□ -0.34
SYN3-206ENST00000461446 DICER1Q9UPY3 1922 aaKnown RBP12.9□□□□□ -0.34
SYN3-206ENST00000461446 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
SYN3-206ENST00000461446 DDNO94850 711 aaPredicted RBP12.9□□□□□ -0.34
SYN3-206ENST00000461446 TRIM28Q13263 835 aaKnown RBP12.9□□□□□ -0.34
SYN3-206ENST00000461446 DNAAF4Q8WXU2 420 aa12.9□□□□□ -0.34
SYN3-206ENST00000461446 NOB1Q9ULX3 412 aaKnown RBP12.9□□□□□ -0.34
SYN3-206ENST00000461446 KIF16BQ96L93 1317 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms