RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 SUSD4Q5VX71 490 aa20.73■□□□□ 0.91
SHANK1-205ENST00000461154 PI4KAP1Q8N8J0 262 aa20.73■□□□□ 0.91
SHANK1-205ENST00000461154 CNKSR1Q969H4 720 aa20.73■□□□□ 0.91
SHANK1-205ENST00000461154 UTP14AQ9BVJ6 771 aaKnown RBP20.73■□□□□ 0.91
SHANK1-205ENST00000461154 RNF123Q5XPI4 1314 aa20.73■□□□□ 0.91
SHANK1-205ENST00000461154 KLRG2A4D1S0 409 aaPredicted RBP20.72■□□□□ 0.91
SHANK1-205ENST00000461154 SRGNP10124 158 aa20.72■□□□□ 0.91
SHANK1-205ENST00000461154 NEXNQ0ZGT2 675 aa20.72■□□□□ 0.91
SHANK1-205ENST00000461154 STYK1Q6J9G0 422 aa20.72■□□□□ 0.91
SHANK1-205ENST00000461154 NLRP10Q86W26 655 aa20.72■□□□□ 0.91
SHANK1-205ENST00000461154 MASTLQ96GX5 879 aa20.72■□□□□ 0.91
SHANK1-205ENST00000461154 MYD88Q99836 296 aa20.72■□□□□ 0.91
SHANK1-205ENST00000461154 ISCA1Q9BUE6 129 aa20.72■□□□□ 0.91
SHANK1-205ENST00000461154 METTL22Q9BUU2 404 aaPredicted RBP20.72■□□□□ 0.91
SHANK1-205ENST00000461154 ADCY9O60503 1353 aa20.72■□□□□ 0.91
SHANK1-205ENST00000461154 BRCA1P38398 1863 aaKnown RBP20.71■□□□□ 0.91
SHANK1-205ENST00000461154 ATP5J2-PTCD1G3V325 749 aa20.71■□□□□ 0.91
SHANK1-205ENST00000461154 NTSR2O95665 410 aa20.71■□□□□ 0.91
SHANK1-205ENST00000461154 TRIM28Q13263 835 aaKnown RBP20.71■□□□□ 0.91
SHANK1-205ENST00000461154 SSH1Q8WYL5 1049 aa20.71■□□□□ 0.91
SHANK1-205ENST00000461154 ANKRD31Q8N7Z5 1873 aa20.71■□□□□ 0.91
SHANK1-205ENST00000461154 NPR1P16066 1061 aa20.7■□□□□ 0.9
SHANK1-205ENST00000461154 ERFEQ4G0M1 354 aa20.7■□□□□ 0.9
SHANK1-205ENST00000461154 NUTM1Q86Y26 1132 aa20.7■□□□□ 0.9
SHANK1-205ENST00000461154 MRPL50Q8N5N7 158 aaKnown RBP20.7■□□□□ 0.9
SHANK1-205ENST00000461154 SMC4Q9NTJ3 1288 aa20.7■□□□□ 0.9
SHANK1-205ENST00000461154 RIC1Q4ADV7 1423 aa20.7■□□□□ 0.9
SHANK1-205ENST00000461154 ZNF784Q8NCA9 323 aaPredicted RBP20.69■□□□□ 0.9
SHANK1-205ENST00000461154 DNAAF4Q8WXU2 420 aa20.69■□□□□ 0.9
SHANK1-205ENST00000461154 TRMT112Q9UI30 125 aaKnown RBP20.69■□□□□ 0.9
SHANK1-205ENST00000461154 CCDC191Q8NCU4 936 aa20.68■□□□□ 0.9
SHANK1-205ENST00000461154 PTPRCP08575 1304 aa20.68■□□□□ 0.9
SHANK1-205ENST00000461154 SH3TC1Q8TE82 1336 aa20.68■□□□□ 0.9
SHANK1-205ENST00000461154 ARFGEF1Q9Y6D6 1849 aa20.67■□□□□ 0.9
SHANK1-205ENST00000461154 BCL2L13Q9BXK5 485 aa20.67■□□□□ 0.9
SHANK1-205ENST00000461154 CWC25Q9NXE8 425 aaPredicted RBP20.67■□□□□ 0.9
SHANK1-205ENST00000461154 DLEC1Q9Y238 1755 aa20.67■□□□□ 0.9
SHANK1-205ENST00000461154 ALDH1B1P30837 517 aa20.66■□□□□ 0.9
SHANK1-205ENST00000461154 RARSP54136 660 aaKnown RBP20.66■□□□□ 0.9
SHANK1-205ENST00000461154 SLC10A5Q5PT55 438 aa20.66■□□□□ 0.9
SHANK1-205ENST00000461154 ABCC12Q96J65 1359 aa20.66■□□□□ 0.9
SHANK1-205ENST00000461154 CRY2Q49AN0 593 aa20.65■□□□□ 0.9
SHANK1-205ENST00000461154 NLRP3Q96P20 1036 aa20.65■□□□□ 0.9
SHANK1-205ENST00000461154 HSP90B1P14625 803 aaKnown RBP20.64■□□□□ 0.89
SHANK1-205ENST00000461154 BRPF1P55201 1214 aaPredicted RBP20.64■□□□□ 0.89
SHANK1-205ENST00000461154 SOGA3Q5TF21 947 aa20.64■□□□□ 0.89
SHANK1-205ENST00000461154 PRPF40BQ6NWY9 871 aaKnown RBP20.64■□□□□ 0.89
SHANK1-205ENST00000461154 LINS1Q8NG48 757 aa20.64■□□□□ 0.89
SHANK1-205ENST00000461154 COL11A2P13942 1736 aaPredicted RBP20.64■□□□□ 0.89
SHANK1-205ENST00000461154 KIF16BQ96L93 1317 aa20.63■□□□□ 0.89
SHANK1-205ENST00000461154 NEURL1BA8MQ27 555 aa20.63■□□□□ 0.89
SHANK1-205ENST00000461154 F6X3S4 739 aa20.63■□□□□ 0.89
SHANK1-205ENST00000461154 C21orf2O43822 256 aa20.63■□□□□ 0.89
SHANK1-205ENST00000461154 IGKV5-2P06315 115 aa20.63■□□□□ 0.89
SHANK1-205ENST00000461154 ZBTB38Q8NAP3 1195 aaPredicted RBP20.63■□□□□ 0.89
SHANK1-205ENST00000461154 RPGRQ92834 1020 aaKnown RBP20.63■□□□□ 0.89
SHANK1-205ENST00000461154 ZNF219Q9P2Y4 722 aaPredicted RBP20.63■□□□□ 0.89
SHANK1-205ENST00000461154 TNRC6CQ9HCJ0 1690 aaKnown RBP20.63■□□□□ 0.89
SHANK1-205ENST00000461154 PCCAP05165 728 aaPredicted RBP20.62■□□□□ 0.89
SHANK1-205ENST00000461154 CWF19L2Q2TBE0 894 aaKnown RBP20.62■□□□□ 0.89
SHANK1-205ENST00000461154 C9orf131Q5VYM1 1079 aa20.62■□□□□ 0.89
SHANK1-205ENST00000461154 FAM89AQ96GI7 184 aa20.62■□□□□ 0.89
SHANK1-205ENST00000461154 HOXA10P31260 410 aaPredicted RBP20.61■□□□□ 0.89
SHANK1-205ENST00000461154 SLC4A10Q6U841 1118 aa20.61■□□□□ 0.89
SHANK1-205ENST00000461154 RBM17Q96I25 401 aaKnown RBP20.61■□□□□ 0.89
SHANK1-205ENST00000461154 YTHDC1Q96MU7 727 aaKnown RBP20.61■□□□□ 0.89
SHANK1-205ENST00000461154 LAMB2P55268 1798 aa20.6■□□□□ 0.89
SHANK1-205ENST00000461154 BEND3Q5T5X7 828 aa20.6■□□□□ 0.89
SHANK1-205ENST00000461154 DDX60Q8IY21 1712 aaKnown RBP20.59■□□□□ 0.89
SHANK1-205ENST00000461154 IRS4O14654 1257 aaPredicted RBP20.59■□□□□ 0.89
SHANK1-205ENST00000461154 HCLS1P14317 486 aaPredicted RBP20.59■□□□□ 0.89
SHANK1-205ENST00000461154 LMNB1P20700 586 aa20.59■□□□□ 0.89
SHANK1-205ENST00000461154 RASSF7Q02833 373 aa20.59■□□□□ 0.89
SHANK1-205ENST00000461154 GCKRQ14397 625 aa20.59■□□□□ 0.89
SHANK1-205ENST00000461154 RTL5Q5HYW3 569 aaPredicted RBP20.59■□□□□ 0.89
SHANK1-205ENST00000461154 SYNE4Q8N205 404 aa20.59■□□□□ 0.89
SHANK1-205ENST00000461154 C7orf43Q8WVR3 580 aa20.59■□□□□ 0.89
SHANK1-205ENST00000461154 CRAMP1Q96RY5 1269 aa20.59■□□□□ 0.89
SHANK1-205ENST00000461154 API5Q9BZZ5 524 aaKnown RBP20.59■□□□□ 0.89
SHANK1-205ENST00000461154 RNF181Q9P0P0 153 aa20.59■□□□□ 0.89
SHANK1-205ENST00000461154 NOB1Q9ULX3 412 aaKnown RBP20.59■□□□□ 0.89
SHANK1-205ENST00000461154 NFKBIEO00221 500 aa20.58■□□□□ 0.89
SHANK1-205ENST00000461154 IPO8O15397 1037 aaKnown RBP20.58■□□□□ 0.89
SHANK1-205ENST00000461154 ALDH1L1O75891 902 aa20.58■□□□□ 0.89
SHANK1-205ENST00000461154 SRCIN1Q9C0H9 1055 aa20.58■□□□□ 0.89
SHANK1-205ENST00000461154 CDHR2Q9BYE9 1310 aa20.57■□□□□ 0.88
SHANK1-205ENST00000461154 LTBP3Q9NS15 1303 aa20.57■□□□□ 0.88
SHANK1-205ENST00000461154 CCDC93Q567U6 631 aa20.57■□□□□ 0.88
SHANK1-205ENST00000461154 ARHGAP45Q92619 1136 aa20.57■□□□□ 0.88
SHANK1-205ENST00000461154 SLX4Q8IY92 1834 aa20.56■□□□□ 0.88
SHANK1-205ENST00000461154 CC2D2BQ6DHV5 1058 aa20.56■□□□□ 0.88
SHANK1-205ENST00000461154 C3orf67Q6ZVT6 689 aa20.56■□□□□ 0.88
SHANK1-205ENST00000461154 TAOK3Q9H2K8 898 aa20.56■□□□□ 0.88
SHANK1-205ENST00000461154 GPBP1L1Q9HC44 474 aaPredicted RBP20.56■□□□□ 0.88
SHANK1-205ENST00000461154 H7C1W4 665 aa20.55■□□□□ 0.88
SHANK1-205ENST00000461154 PDE8AO60658 829 aa20.55■□□□□ 0.88
SHANK1-205ENST00000461154 BCAR3O75815 825 aa20.55■□□□□ 0.88
SHANK1-205ENST00000461154 UBE3BQ7Z3V4 1068 aa20.55■□□□□ 0.88
SHANK1-205ENST00000461154 RTKN2Q8IZC4 609 aa20.55■□□□□ 0.88
SHANK1-205ENST00000461154 CACNA1SQ13698 1873 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms