RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 DACH1Q9UI36 760 aa7.96□□□□□ -1.14
NUP98-208ENST00000461047 USP19O94966 1318 aa7.96□□□□□ -1.14
NUP98-208ENST00000461047 PHLPP1O60346 1717 aa7.95□□□□□ -1.14
NUP98-208ENST00000461047 RGPD8O14715 1765 aaPredicted RBP7.95□□□□□ -1.14
NUP98-208ENST00000461047 SIAH2O43255 324 aa7.95□□□□□ -1.14
NUP98-208ENST00000461047 ADAMTS2O95450 1211 aa7.95□□□□□ -1.14
NUP98-208ENST00000461047 F12P00748 615 aaPredicted RBP7.95□□□□□ -1.14
NUP98-208ENST00000461047 ZC3H6P61129 1189 aaKnown RBP7.95□□□□□ -1.14
NUP98-208ENST00000461047 ZNF775Q96BV0 537 aaPredicted RBP7.95□□□□□ -1.14
NUP98-208ENST00000461047 GMPR2Q9P2T1 348 aaKnown RBP7.95□□□□□ -1.14
NUP98-208ENST00000461047 NUDCQ9Y266 331 aa7.95□□□□□ -1.14
NUP98-208ENST00000461047 NHSL1Q5SYE7 1610 aa7.95□□□□□ -1.14
NUP98-208ENST00000461047 AATKQ6ZMQ8 1374 aa7.95□□□□□ -1.14
NUP98-208ENST00000461047 SKIV2LQ15477 1246 aaKnown RBP7.94□□□□□ -1.14
NUP98-208ENST00000461047 RTL5Q5HYW3 569 aaPredicted RBP7.94□□□□□ -1.14
NUP98-208ENST00000461047 ARHGEF25Q86VW2 580 aa7.94□□□□□ -1.14
NUP98-208ENST00000461047 PRKRIP1Q9H875 184 aaPredicted RBP7.94□□□□□ -1.14
NUP98-208ENST00000461047 SENP2Q9HC62 589 aa7.94□□□□□ -1.14
NUP98-208ENST00000461047 ATP13A2Q9NQ11 1180 aa7.94□□□□□ -1.14
NUP98-208ENST00000461047 MYBBP1AQ9BQG0 1328 aaKnown RBP7.94□□□□□ -1.14
NUP98-208ENST00000461047 KIF24Q5T7B8 1368 aa7.94□□□□□ -1.14
NUP98-208ENST00000461047 CSB-PGBD3P0DP91 1061 aa7.93□□□□□ -1.14
NUP98-208ENST00000461047 MTHFSP49914 203 aa7.93□□□□□ -1.14
NUP98-208ENST00000461047 SH3D19Q5HYK7 790 aa7.93□□□□□ -1.14
NUP98-208ENST00000461047 NBPF14Q5TI25 921 aa7.93□□□□□ -1.14
NUP98-208ENST00000461047 BPHLQ86WA6 291 aaPredicted RBP7.93□□□□□ -1.14
NUP98-208ENST00000461047 IP6K1Q92551 441 aa7.93□□□□□ -1.14
NUP98-208ENST00000461047 FAM117AQ9C073 453 aa7.93□□□□□ -1.14
NUP98-208ENST00000461047 TLL2Q9Y6L7 1015 aa7.93□□□□□ -1.14
NUP98-208ENST00000461047 CPDO75976 1380 aa7.93□□□□□ -1.14
NUP98-208ENST00000461047 COL16A1Q07092 1604 aaPredicted RBP7.92□□□□□ -1.14
NUP98-208ENST00000461047 MYOM1P52179 1685 aa7.92□□□□□ -1.14
NUP98-208ENST00000461047 MON2Q7Z3U7 1717 aa7.92□□□□□ -1.14
NUP98-208ENST00000461047 AKAP12Q02952 1782 aa7.92□□□□□ -1.14
NUP98-208ENST00000461047 NEFMP07197 916 aa7.92□□□□□ -1.14
NUP98-208ENST00000461047 PPP2R1AP30153 589 aa7.92□□□□□ -1.14
NUP98-208ENST00000461047 ARID5BQ14865 1188 aa7.92□□□□□ -1.14
NUP98-208ENST00000461047 RRS1Q15050 365 aaKnown RBP7.92□□□□□ -1.14
NUP98-208ENST00000461047 ZNF772Q68DY9 489 aaPredicted RBP7.92□□□□□ -1.14
NUP98-208ENST00000461047 C8orf37Q96NL8 207 aa7.92□□□□□ -1.14
NUP98-208ENST00000461047 PNNQ9H307 717 aaKnown RBP7.92□□□□□ -1.14
NUP98-208ENST00000461047 POLKQ9UBT6 870 aa7.92□□□□□ -1.14
NUP98-208ENST00000461047 MAP3K19Q56UN5 1328 aa7.92□□□□□ -1.14
NUP98-208ENST00000461047 KIAA0232Q92628 1395 aa7.92□□□□□ -1.14
NUP98-208ENST00000461047 OVOS2A0A0J9YW53 1432 aa7.92□□□□□ -1.14
NUP98-208ENST00000461047 OVOS2Q6IE36 1432 aa7.92□□□□□ -1.14
NUP98-208ENST00000461047 SMG6Q86US8 1419 aaKnown RBP7.92□□□□□ -1.14
NUP98-208ENST00000461047 FAM83GA6ND36 823 aa7.91□□□□□ -1.14
NUP98-208ENST00000461047 CAPN5O15484 640 aaPredicted RBP7.91□□□□□ -1.14
NUP98-208ENST00000461047 DIAPH1O60610 1272 aaKnown RBP7.91□□□□□ -1.14
NUP98-208ENST00000461047 FOXJ1Q92949 421 aa7.91□□□□□ -1.14
NUP98-208ENST00000461047 KIFC2Q96AC6 838 aa7.91□□□□□ -1.14
NUP98-208ENST00000461047 CCDC9Q9Y3X0 531 aaKnown RBP7.91□□□□□ -1.14
NUP98-208ENST00000461047 RTL1A6NKG5 1358 aa7.91□□□□□ -1.14
NUP98-208ENST00000461047 FLT4P35916 1363 aa7.91□□□□□ -1.14
NUP98-208ENST00000461047 PARD3Q8TEW0 1356 aa7.91□□□□□ -1.14
NUP98-208ENST00000461047 TRPM3Q9HCF6 1732 aaPredicted RBP7.9□□□□□ -1.14
NUP98-208ENST00000461047 HOXC9P31274 260 aa7.9□□□□□ -1.14
NUP98-208ENST00000461047 WDR43Q15061 677 aaKnown RBP eCLIP7.9□□□□□ -1.14
NUP98-208ENST00000461047 CHRNA2Q15822 529 aa7.9□□□□□ -1.14
NUP98-208ENST00000461047 UNC5CLQ8IV45 518 aa7.9□□□□□ -1.14
NUP98-208ENST00000461047 MPNDQ8N594 471 aa7.9□□□□□ -1.14
NUP98-208ENST00000461047 STRN4Q9NRL3 753 aa7.9□□□□□ -1.14
NUP98-208ENST00000461047 BTG4Q9NY30 223 aa7.9□□□□□ -1.14
NUP98-208ENST00000461047 USP21Q9UK80 565 aa7.9□□□□□ -1.14
NUP98-208ENST00000461047 EMILIN1Q9Y6C2 1016 aa7.9□□□□□ -1.14
NUP98-208ENST00000461047 MED1Q15648 1581 aaPredicted RBP7.89□□□□□ -1.15
NUP98-208ENST00000461047 SLIT3O75094 1523 aa7.89□□□□□ -1.15
NUP98-208ENST00000461047 BLMP54132 1417 aaPredicted RBP7.89□□□□□ -1.15
NUP98-208ENST00000461047 INSRP06213 1382 aa7.89□□□□□ -1.15
NUP98-208ENST00000461047 CCER2I3L3R5 266 aa7.89□□□□□ -1.15
NUP98-208ENST00000461047 CTDSPL2Q05D32 466 aa7.89□□□□□ -1.15
NUP98-208ENST00000461047 NNTQ13423 1086 aa7.89□□□□□ -1.15
NUP98-208ENST00000461047 NEUROD2Q15784 382 aa7.89□□□□□ -1.15
NUP98-208ENST00000461047 TOM1L2Q6ZVM7 507 aa7.89□□□□□ -1.15
NUP98-208ENST00000461047 FNBP4Q8N3X1 1017 aaPredicted RBP7.89□□□□□ -1.15
NUP98-208ENST00000461047 ANKRD24Q8TF21 1146 aa7.89□□□□□ -1.15
NUP98-208ENST00000461047 LTV1Q96GA3 475 aaPredicted RBP7.89□□□□□ -1.15
NUP98-208ENST00000461047 MRS2Q9HD23 443 aa7.89□□□□□ -1.15
NUP98-208ENST00000461047 NLRP2Q9NX02 1062 aa7.89□□□□□ -1.15
NUP98-208ENST00000461047 SHPRHQ149N8 1683 aa7.89□□□□□ -1.15
NUP98-208ENST00000461047 ALS2Q96Q42 1657 aa7.89□□□□□ -1.15
NUP98-208ENST00000461047 NRKQ7Z2Y5 1582 aa7.88□□□□□ -1.15
NUP98-208ENST00000461047 U2SURPO15042 1029 aaKnown RBP7.88□□□□□ -1.15
NUP98-208ENST00000461047 FBLN1P23142 703 aa7.88□□□□□ -1.15
NUP98-208ENST00000461047 HSP90AB2PQ58FF8 381 aa7.88□□□□□ -1.15
NUP98-208ENST00000461047 PROCA1Q8NCQ7 364 aaPredicted RBP7.88□□□□□ -1.15
NUP98-208ENST00000461047 TRIM47Q96LD4 638 aa7.88□□□□□ -1.15
NUP98-208ENST00000461047 TRPC5Q9UL62 973 aaPredicted RBP7.88□□□□□ -1.15
NUP98-208ENST00000461047 PIK3C2AO00443 1686 aa7.88□□□□□ -1.15
NUP98-208ENST00000461047 COL22A1Q8NFW1 1626 aaPredicted RBP7.88□□□□□ -1.15
NUP98-208ENST00000461047 AFF2P51816 1311 aa7.87□□□□□ -1.15
NUP98-208ENST00000461047 WDR17Q8IZU2 1322 aa7.87□□□□□ -1.15
NUP98-208ENST00000461047 MAGEB6P1A0A0J9YX57 407 aa7.87□□□□□ -1.15
NUP98-208ENST00000461047 AP1G2O75843 785 aa7.87□□□□□ -1.15
NUP98-208ENST00000461047 ADH1CP00326 375 aa7.87□□□□□ -1.15
NUP98-208ENST00000461047 VPS72Q15906 364 aa7.87□□□□□ -1.15
NUP98-208ENST00000461047 RAPGEF4Q8WZA2 1011 aa7.87□□□□□ -1.15
NUP98-208ENST00000461047 GPKOWQ92917 476 aaPredicted RBP eCLIP7.87□□□□□ -1.154e-6■□□□□ 10.6
NUP98-208ENST00000461047 CDCA7Q9BWT1 371 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms