RNA–Protein interactions for RNA: ENST00000460944.6

DDR1-241, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 1,248 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-241ENST00000460944 BCS1LQ9Y276 419 aa23.52■■□□□ 1.36
DDR1-241ENST00000460944 MAP3K2Q9Y2U5 619 aa23.52■■□□□ 1.36
DDR1-241ENST00000460944 ZBED9Q6R2W3 1325 aa23.52■■□□□ 1.36
DDR1-241ENST00000460944 COL11A2P13942 1736 aaPredicted RBP23.51■■□□□ 1.35
DDR1-241ENST00000460944 ATP5J2-PTCD1G3V325 749 aa23.51■■□□□ 1.35
DDR1-241ENST00000460944 KCNA3P22001 575 aa23.51■■□□□ 1.35
DDR1-241ENST00000460944 ERFEQ4G0M1 354 aa23.51■■□□□ 1.35
DDR1-241ENST00000460944 ABCC12Q96J65 1359 aa23.51■■□□□ 1.35
DDR1-241ENST00000460944 CT47B1P0C2W7 299 aaPredicted RBP23.5■■□□□ 1.35
DDR1-241ENST00000460944 NEXNQ0ZGT2 675 aa23.5■■□□□ 1.35
DDR1-241ENST00000460944 DALRD3Q5D0E6 543 aaKnown RBP23.5■■□□□ 1.35
DDR1-241ENST00000460944 METTL22Q9BUU2 404 aaPredicted RBP23.5■■□□□ 1.35
DDR1-241ENST00000460944 TRMT112Q9UI30 125 aaKnown RBP23.5■■□□□ 1.35
DDR1-241ENST00000460944 RIC1Q4ADV7 1423 aa23.5■■□□□ 1.35
DDR1-241ENST00000460944 ARFGEF1Q9Y6D6 1849 aa23.49■■□□□ 1.35
DDR1-241ENST00000460944 ZNF622Q969S3 477 aaKnown RBP eCLIP23.49■■□□□ 1.35
DDR1-241ENST00000460944 ADCY9O60503 1353 aa23.49■■□□□ 1.35
DDR1-241ENST00000460944 TRIM28Q13263 835 aaKnown RBP23.48■■□□□ 1.35
DDR1-241ENST00000460944 CHD4Q14839 1912 aa23.48■■□□□ 1.35
DDR1-241ENST00000460944 SH3TC1Q8TE82 1336 aa23.48■■□□□ 1.35
DDR1-241ENST00000460944 TNRC6CQ9HCJ0 1690 aaKnown RBP23.48■■□□□ 1.35
DDR1-241ENST00000460944 TTLL6Q8N841 843 aa23.47■■□□□ 1.35
DDR1-241ENST00000460944 MASTLQ96GX5 879 aa23.47■■□□□ 1.35
DDR1-241ENST00000460944 GOLGB1Q14789 3259 aaKnown RBP23.46■■□□□ 1.35
DDR1-241ENST00000460944 SRGNP10124 158 aa23.46■■□□□ 1.35
DDR1-241ENST00000460944 CACNA1SQ13698 1873 aa23.46■■□□□ 1.35
DDR1-241ENST00000460944 ALDH1L2Q3SY69 923 aa23.46■■□□□ 1.35
DDR1-241ENST00000460944 STYK1Q6J9G0 422 aa23.46■■□□□ 1.35
DDR1-241ENST00000460944 CCDC191Q8NCU4 936 aa23.46■■□□□ 1.35
DDR1-241ENST00000460944 KLRG2A4D1S0 409 aaPredicted RBP23.45■■□□□ 1.34
DDR1-241ENST00000460944 NPR1P16066 1061 aa23.45■■□□□ 1.34
DDR1-241ENST00000460944 DNAAF4Q8WXU2 420 aa23.45■■□□□ 1.34
DDR1-241ENST00000460944 CNKSR1Q969H4 720 aa23.45■■□□□ 1.34
DDR1-241ENST00000460944 NLRP3Q96P20 1036 aa23.45■■□□□ 1.34
DDR1-241ENST00000460944 CWC25Q9NXE8 425 aaPredicted RBP23.45■■□□□ 1.34
DDR1-241ENST00000460944 MRPL50Q8N5N7 158 aaKnown RBP23.44■■□□□ 1.34
DDR1-241ENST00000460944 SSH1Q8WYL5 1049 aa23.44■■□□□ 1.34
DDR1-241ENST00000460944 SMC4Q9NTJ3 1288 aa23.44■■□□□ 1.34
DDR1-241ENST00000460944 SLC10A5Q5PT55 438 aa23.43■■□□□ 1.34
DDR1-241ENST00000460944 RPGRQ92834 1020 aaKnown RBP23.43■■□□□ 1.34
DDR1-241ENST00000460944 CRY2Q49AN0 593 aa23.42■■□□□ 1.34
DDR1-241ENST00000460944 FAM89AQ96GI7 184 aa23.42■■□□□ 1.34
DDR1-241ENST00000460944 BCL2L13Q9BXK5 485 aa23.42■■□□□ 1.34
DDR1-241ENST00000460944 HCLS1P14317 486 aaPredicted RBP23.41■■□□□ 1.34
DDR1-241ENST00000460944 HSP90B1P14625 803 aaKnown RBP23.41■■□□□ 1.34
DDR1-241ENST00000460944 ZBTB38Q8NAP3 1195 aaPredicted RBP23.41■■□□□ 1.34
DDR1-241ENST00000460944 LAMB2P55268 1798 aa23.41■■□□□ 1.34
DDR1-241ENST00000460944 PTPRCP08575 1304 aa23.4■■□□□ 1.34
DDR1-241ENST00000460944 DDX60Q8IY21 1712 aaKnown RBP23.4■■□□□ 1.34
DDR1-241ENST00000460944 PCCAP05165 728 aaPredicted RBP23.4■■□□□ 1.34
DDR1-241ENST00000460944 IGKV5-2P06315 115 aa23.4■■□□□ 1.34
DDR1-241ENST00000460944 RTL5Q5HYW3 569 aaPredicted RBP23.4■■□□□ 1.34
DDR1-241ENST00000460944 LINS1Q8NG48 757 aa23.4■■□□□ 1.34
DDR1-241ENST00000460944 SLX4Q8IY92 1834 aa23.39■■□□□ 1.33
DDR1-241ENST00000460944 NEURL1BA8MQ27 555 aa23.39■■□□□ 1.33
DDR1-241ENST00000460944 F6X3S4 739 aa23.39■■□□□ 1.33
DDR1-241ENST00000460944 ALDH1B1P30837 517 aa23.39■■□□□ 1.33
DDR1-241ENST00000460944 CWF19L2Q2TBE0 894 aaKnown RBP23.39■■□□□ 1.33
DDR1-241ENST00000460944 PRPF40BQ6NWY9 871 aaKnown RBP23.39■■□□□ 1.33
DDR1-241ENST00000460944 ARHGAP27Q6ZUM4 889 aa23.39■■□□□ 1.33
DDR1-241ENST00000460944 SYNE4Q8N205 404 aa23.39■■□□□ 1.33
DDR1-241ENST00000460944 IRS4O14654 1257 aaPredicted RBP23.38■■□□□ 1.33
DDR1-241ENST00000460944 RBM17Q96I25 401 aaKnown RBP23.38■■□□□ 1.33
DDR1-241ENST00000460944 UTRNP46939 3433 aa23.38■■□□□ 1.33
DDR1-241ENST00000460944 C3orf67Q6ZVT6 689 aa23.37■■□□□ 1.33
DDR1-241ENST00000460944 HOXA10P31260 410 aaPredicted RBP23.36■■□□□ 1.33
DDR1-241ENST00000460944 RARSP54136 660 aaKnown RBP23.36■■□□□ 1.33
DDR1-241ENST00000460944 SLC4A10Q6U841 1118 aa23.36■■□□□ 1.33
DDR1-241ENST00000460944 ZNF219Q9P2Y4 722 aaPredicted RBP23.36■■□□□ 1.33
DDR1-241ENST00000460944 C21orf2O43822 256 aa23.35■■□□□ 1.33
DDR1-241ENST00000460944 GCKRQ14397 625 aa23.35■■□□□ 1.33
DDR1-241ENST00000460944 SOGA3Q5TF21 947 aa23.35■■□□□ 1.33
DDR1-241ENST00000460944 CRAMP1Q96RY5 1269 aa23.35■■□□□ 1.33
DDR1-241ENST00000460944 CDHR2Q9BYE9 1310 aa23.34■■□□□ 1.33
DDR1-241ENST00000460944 BEND3Q5T5X7 828 aa23.34■■□□□ 1.33
DDR1-241ENST00000460944 KIF16BQ96L93 1317 aa23.33■■□□□ 1.33
DDR1-241ENST00000460944 MYH3P11055 1940 aa23.33■■□□□ 1.33
DDR1-241ENST00000460944 YY1P25490 414 aa23.33■■□□□ 1.33
DDR1-241ENST00000460944 DDX46Q7L014 1031 aaKnown RBP23.33■■□□□ 1.33
DDR1-241ENST00000460944 SRCIN1Q9C0H9 1055 aa23.33■■□□□ 1.33
DDR1-241ENST00000460944 PDE8AO60658 829 aa23.32■■□□□ 1.32
DDR1-241ENST00000460944 BRPF1P55201 1214 aaPredicted RBP23.32■■□□□ 1.32
DDR1-241ENST00000460944 SF3B3Q15393 1217 aaKnown RBP23.32■■□□□ 1.32
DDR1-241ENST00000460944 UBE3BQ7Z3V4 1068 aa23.32■■□□□ 1.32
DDR1-241ENST00000460944 JARID2Q92833 1246 aaPredicted RBP23.32■■□□□ 1.32
DDR1-241ENST00000460944 ALDH1L1O75891 902 aa23.31■■□□□ 1.32
DDR1-241ENST00000460944 CCDC93Q567U6 631 aa23.31■■□□□ 1.32
DDR1-241ENST00000460944 NOB1Q9ULX3 412 aaKnown RBP23.31■■□□□ 1.32
DDR1-241ENST00000460944 ABCC4O15439 1325 aa23.31■■□□□ 1.32
DDR1-241ENST00000460944 H7C1W4 665 aa23.3■■□□□ 1.32
DDR1-241ENST00000460944 API5Q9BZZ5 524 aaKnown RBP23.3■■□□□ 1.32
DDR1-241ENST00000460944 TMX4Q9H1E5 349 aaPredicted RBP23.3■■□□□ 1.32
DDR1-241ENST00000460944 FER1L6Q2WGJ9 1857 aa23.3■■□□□ 1.32
DDR1-241ENST00000460944 PPEF1O14829 653 aaPredicted RBP23.29■■□□□ 1.32
DDR1-241ENST00000460944 SBF1O95248 1867 aa23.28■■□□□ 1.32
DDR1-241ENST00000460944 GRAPQ13588 217 aa23.28■■□□□ 1.32
DDR1-241ENST00000460944 CCDC152Q4G0S7 254 aa23.28■■□□□ 1.32
DDR1-241ENST00000460944 GRAPLQ8TC17 118 aaPredicted RBP23.28■■□□□ 1.32
DDR1-241ENST00000460944 C7orf43Q8WVR3 580 aa23.28■■□□□ 1.32
DDR1-241ENST00000460944 C9orf78Q9NZ63 289 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms