RNA–Protein interactions for RNA: ENST00000460903.2

YIPF3-206, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 605 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-206ENST00000460903 AMER1Q5JTC6 1135 aaPredicted RBP20.58■□□□□ 0.89
YIPF3-206ENST00000460903 ZNF652Q9Y2D9 606 aa20.58■□□□□ 0.89
YIPF3-206ENST00000460903 ABCC12Q96J65 1359 aa20.58■□□□□ 0.88
YIPF3-206ENST00000460903 BRPF1P55201 1214 aaPredicted RBP20.57■□□□□ 0.88
YIPF3-206ENST00000460903 DIAPH1O60610 1272 aaKnown RBP20.56■□□□□ 0.88
YIPF3-206ENST00000460903 KNSTRNQ9Y448 316 aa20.56■□□□□ 0.88
YIPF3-206ENST00000460903 CRY2Q49AN0 593 aa20.55■□□□□ 0.88
YIPF3-206ENST00000460903 TAF1P21675 1872 aa20.55■□□□□ 0.88
YIPF3-206ENST00000460903 NBPF26B4DH59 902 aa20.54■□□□□ 0.88
YIPF3-206ENST00000460903 CELF2O95319 508 aaKnown RBP20.54■□□□□ 0.88
YIPF3-206ENST00000460903 CIAPIN1Q6FI81 312 aa20.54■□□□□ 0.88
YIPF3-206ENST00000460903 NBPF10Q6P3W6 841 aaKnown RBP20.54■□□□□ 0.88
YIPF3-206ENST00000460903 LARGE2Q8N3Y3 721 aa20.54■□□□□ 0.88
YIPF3-206ENST00000460903 NBPF15Q8N660 670 aa20.54■□□□□ 0.88
YIPF3-206ENST00000460903 HHIPL1Q96JK4 782 aa20.54■□□□□ 0.88
YIPF3-206ENST00000460903 DLG5Q8TDM6 1919 aa20.53■□□□□ 0.88
YIPF3-206ENST00000460903 BTBD11A6QL63 1104 aa20.53■□□□□ 0.88
YIPF3-206ENST00000460903 HSPA5P11021 654 aaKnown RBP20.53■□□□□ 0.88
YIPF3-206ENST00000460903 HLFQ16534 295 aa20.53■□□□□ 0.88
YIPF3-206ENST00000460903 ZIC5Q96T25 663 aa20.53■□□□□ 0.88
YIPF3-206ENST00000460903 GPRC5DQ9NZD1 345 aa20.53■□□□□ 0.88
YIPF3-206ENST00000460903 RIC1Q4ADV7 1423 aa20.53■□□□□ 0.88
YIPF3-206ENST00000460903 CC2D2BQ6DHV5 1058 aa20.52■□□□□ 0.88
YIPF3-206ENST00000460903 GAS2L2Q8NHY3 880 aa20.52■□□□□ 0.88
YIPF3-206ENST00000460903 GLIS2Q9BZE0 524 aaPredicted RBP20.52■□□□□ 0.88
YIPF3-206ENST00000460903 ANKRD36CQ5JPF3 1778 aa20.51■□□□□ 0.87
YIPF3-206ENST00000460903 RGL2O15211 777 aa20.51■□□□□ 0.87
YIPF3-206ENST00000460903 SOX10P56693 466 aa20.51■□□□□ 0.87
YIPF3-206ENST00000460903 NUTM1Q86Y26 1132 aa20.51■□□□□ 0.87
YIPF3-206ENST00000460903 ADARB2Q9NS39 739 aaKnown RBP20.51■□□□□ 0.87
YIPF3-206ENST00000460903 KDM3BQ7LBC6 1761 aa20.5■□□□□ 0.87
YIPF3-206ENST00000460903 GTF2E1P29083 439 aaPredicted RBP20.49■□□□□ 0.87
YIPF3-206ENST00000460903 EIF4G2P78344 907 aaKnown RBP eCLIP20.49■□□□□ 0.87
YIPF3-206ENST00000460903 HOXA10P31260 410 aaPredicted RBP20.48■□□□□ 0.87
YIPF3-206ENST00000460903 NIM1KQ8IY84 436 aa20.48■□□□□ 0.87
YIPF3-206ENST00000460903 ZNF408Q9H9D4 720 aa20.48■□□□□ 0.87
YIPF3-206ENST00000460903 PGAP2Q9UHJ9 254 aa20.48■□□□□ 0.87
YIPF3-206ENST00000460903 NPC1L1Q9UHC9 1359 aa20.47■□□□□ 0.87
YIPF3-206ENST00000460903 SNRPA1P09661 255 aaKnown RBP20.47■□□□□ 0.87
YIPF3-206ENST00000460903 TCERG1O14776 1098 aaKnown RBP20.46■□□□□ 0.87
YIPF3-206ENST00000460903 U2SURPO15042 1029 aaKnown RBP20.46■□□□□ 0.87
YIPF3-206ENST00000460903 HIRAP54198 1017 aaPredicted RBP20.46■□□□□ 0.87
YIPF3-206ENST00000460903 CXCL9Q07325 125 aa20.46■□□□□ 0.87
YIPF3-206ENST00000460903 AOC3Q16853 763 aa20.46■□□□□ 0.87
YIPF3-206ENST00000460903 RPGRQ92834 1020 aaKnown RBP20.46■□□□□ 0.87
YIPF3-206ENST00000460903 TIMELESSQ9UNS1 1208 aa20.46■□□□□ 0.87
YIPF3-206ENST00000460903 PPIP5K2O43314 1243 aa20.45■□□□□ 0.86
YIPF3-206ENST00000460903 NOGQ13253 232 aa20.45■□□□□ 0.86
YIPF3-206ENST00000460903 GRIPAP1Q4V328 841 aa20.45■□□□□ 0.86
YIPF3-206ENST00000460903 PRPF38BQ5VTL8 546 aaKnown RBP20.45■□□□□ 0.86
YIPF3-206ENST00000460903 PHACTR3Q96KR7 559 aa20.45■□□□□ 0.86
YIPF3-206ENST00000460903 KIF7Q2M1P5 1343 aa20.45■□□□□ 0.86
YIPF3-206ENST00000460903 PPEF1O14829 653 aaPredicted RBP20.44■□□□□ 0.86
YIPF3-206ENST00000460903 GMPSP49915 693 aaPredicted RBP20.44■□□□□ 0.86
YIPF3-206ENST00000460903 NYXQ9GZU5 481 aa20.44■□□□□ 0.86
YIPF3-206ENST00000460903 CRAMP1Q96RY5 1269 aa20.43■□□□□ 0.86
YIPF3-206ENST00000460903 UBN2Q6ZU65 1347 aa20.43■□□□□ 0.86
YIPF3-206ENST00000460903 LRRC37AA6NMS7 1700 aa20.42■□□□□ 0.86
YIPF3-206ENST00000460903 FAM155AB1AL88 458 aaPredicted RBP20.42■□□□□ 0.86
YIPF3-206ENST00000460903 DLK2Q6UY11 383 aa20.42■□□□□ 0.86
YIPF3-206ENST00000460903 C3orf67Q6ZVT6 689 aa20.42■□□□□ 0.86
YIPF3-206ENST00000460903 TRPM4Q8TD43 1214 aa20.42■□□□□ 0.86
YIPF3-206ENST00000460903 IBTKQ9P2D0 1353 aaPredicted RBP20.42■□□□□ 0.86
YIPF3-206ENST00000460903 HUNKP57058 714 aa20.41■□□□□ 0.86
YIPF3-206ENST00000460903 ZC3H15Q8WU90 426 aaKnown RBP20.41■□□□□ 0.86
YIPF3-206ENST00000460903 ZNRF3Q9ULT6 936 aa20.41■□□□□ 0.86
YIPF3-206ENST00000460903 DUOX1Q9NRD9 1551 aa20.41■□□□□ 0.86
YIPF3-206ENST00000460903 SHTN1A0MZ66 631 aa20.4■□□□□ 0.86
YIPF3-206ENST00000460903 CC2D1BQ5T0F9 858 aaKnown RBP20.4■□□□□ 0.86
YIPF3-206ENST00000460903 CDC37L1Q7L3B6 337 aa20.4■□□□□ 0.86
YIPF3-206ENST00000460903 MCM10Q7L590 875 aa20.4■□□□□ 0.86
YIPF3-206ENST00000460903 DDX60Q8IY21 1712 aaKnown RBP20.4■□□□□ 0.86
YIPF3-206ENST00000460903 RBM17Q96I25 401 aaKnown RBP20.4■□□□□ 0.86
YIPF3-206ENST00000460903 CDHR2Q9BYE9 1310 aa20.4■□□□□ 0.86
YIPF3-206ENST00000460903 PER1O15534 1290 aaPredicted RBP20.39■□□□□ 0.85
YIPF3-206ENST00000460903 SAGE1Q9NXZ1 904 aa20.39■□□□□ 0.85
YIPF3-206ENST00000460903 MAP3K15Q6ZN16 1313 aa20.38■□□□□ 0.85
YIPF3-206ENST00000460903 GPTP24298 496 aa20.38■□□□□ 0.85
YIPF3-206ENST00000460903 PRKAR2BP31323 418 aa20.38■□□□□ 0.85
YIPF3-206ENST00000460903 SUSD4Q5VX71 490 aa20.38■□□□□ 0.85
YIPF3-206ENST00000460903 NGEFQ8N5V2 710 aa20.38■□□□□ 0.85
YIPF3-206ENST00000460903 RSPH6AQ9H0K4 717 aa20.38■□□□□ 0.85
YIPF3-206ENST00000460903 VPS33BQ9H267 617 aa20.38■□□□□ 0.85
YIPF3-206ENST00000460903 SCN9AQ15858 1988 aa20.37■□□□□ 0.85
YIPF3-206ENST00000460903 ERVV-1B6SEH8 477 aa20.37■□□□□ 0.85
YIPF3-206ENST00000460903 TTLL7Q6ZT98 887 aa20.37■□□□□ 0.85
YIPF3-206ENST00000460903 USP48Q86UV5 1035 aa20.37■□□□□ 0.85
YIPF3-206ENST00000460903 RTFDC1Q9BY42 306 aaPredicted RBP20.37■□□□□ 0.85
YIPF3-206ENST00000460903 ATP6V0A2Q9Y487 856 aa20.37■□□□□ 0.85
YIPF3-206ENST00000460903 RAD17O75943 681 aa20.36■□□□□ 0.85
YIPF3-206ENST00000460903 NTSR2O95665 410 aa20.36■□□□□ 0.85
YIPF3-206ENST00000460903 DCTN1Q14203 1278 aa20.36■□□□□ 0.85
YIPF3-206ENST00000460903 RGMBQ6NW40 437 aa20.36■□□□□ 0.85
YIPF3-206ENST00000460903 BCL2L13Q9BXK5 485 aa20.36■□□□□ 0.85
YIPF3-206ENST00000460903 RNF186Q9NXI6 227 aa20.36■□□□□ 0.85
YIPF3-206ENST00000460903 PSME4Q14997 1843 aa20.35■□□□□ 0.85
YIPF3-206ENST00000460903 TRPA1O75762 1119 aa20.35■□□□□ 0.85
YIPF3-206ENST00000460903 KIF23Q02241 960 aaPredicted RBP20.35■□□□□ 0.85
YIPF3-206ENST00000460903 CNOT7Q9UIV1 285 aaKnown RBP20.35■□□□□ 0.85
YIPF3-206ENST00000460903 ABCC4O15439 1325 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms