RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 ASAP1Q9ULH1 1129 aa16.89■□□□□ 0.29
PTPRN-210ENST00000460801 TJP1Q07157 1748 aa16.89■□□□□ 0.29
PTPRN-210ENST00000460801 GBP4Q96PP9 640 aa16.89■□□□□ 0.29
PTPRN-210ENST00000460801 DIAPH3Q9NSV4 1193 aa16.89■□□□□ 0.29
PTPRN-210ENST00000460801 ATG3Q9NT62 314 aa16.89■□□□□ 0.29
PTPRN-210ENST00000460801 PLCH1Q4KWH8 1693 aa16.88■□□□□ 0.29
PTPRN-210ENST00000460801 LMBR1LQ6UX01 489 aa16.88■□□□□ 0.29
PTPRN-210ENST00000460801 ZBTB3Q9H5J0 574 aa16.88■□□□□ 0.29
PTPRN-210ENST00000460801 KIAA1211Q6ZU35 1233 aa16.88■□□□□ 0.29
PTPRN-210ENST00000460801 SSFA2P28290 1259 aa16.87■□□□□ 0.29
PTPRN-210ENST00000460801 LRP6O75581 1613 aa16.86■□□□□ 0.29
PTPRN-210ENST00000460801 TRAK2O60296 914 aa16.86■□□□□ 0.29
PTPRN-210ENST00000460801 CYP2E1P05181 493 aaPredicted RBP16.86■□□□□ 0.29
PTPRN-210ENST00000460801 NUCB2P80303 420 aa16.86■□□□□ 0.29
PTPRN-210ENST00000460801 TFCP2Q12800 502 aa16.86■□□□□ 0.29
PTPRN-210ENST00000460801 TMX3Q96JJ7 454 aa16.86■□□□□ 0.29
PTPRN-210ENST00000460801 LTBP4Q8N2S1 1624 aa16.86■□□□□ 0.29
PTPRN-210ENST00000460801 HIP1O00291 1037 aa16.86■□□□□ 0.29
PTPRN-210ENST00000460801 TNNI3KQ59H18 835 aa16.86■□□□□ 0.29
PTPRN-210ENST00000460801 DNAJC10Q8IXB1 793 aa16.86■□□□□ 0.29
PTPRN-210ENST00000460801 ZGPATQ8N5A5 531 aaKnown RBP16.86■□□□□ 0.29
PTPRN-210ENST00000460801 ISCA1Q9BUE6 129 aa16.86■□□□□ 0.29
PTPRN-210ENST00000460801 FPGT-TNNI3KV9GXZ4 949 aa16.86■□□□□ 0.29
PTPRN-210ENST00000460801 BCL9O00512 1426 aa16.86■□□□□ 0.29
PTPRN-210ENST00000460801 CUL4AQ13619 759 aa16.85■□□□□ 0.29
PTPRN-210ENST00000460801 SNX14Q9Y5W7 946 aa16.85■□□□□ 0.29
PTPRN-210ENST00000460801 TCIRG1Q13488 830 aa16.85■□□□□ 0.29
PTPRN-210ENST00000460801 BOLA2Q9H3K6 86 aa16.85■□□□□ 0.29
PTPRN-210ENST00000460801 DBNLQ9UJU6 430 aaKnown RBP16.85■□□□□ 0.29
PTPRN-210ENST00000460801 EXOC5O00471 708 aa16.84■□□□□ 0.29
PTPRN-210ENST00000460801 ATP5JP18859 108 aa16.84■□□□□ 0.29
PTPRN-210ENST00000460801 TRIM28Q13263 835 aaKnown RBP16.84■□□□□ 0.29
PTPRN-210ENST00000460801 UPF3BQ9BZI7 483 aaKnown RBP16.84■□□□□ 0.29
PTPRN-210ENST00000460801 SNRKQ9NRH2 765 aa16.84■□□□□ 0.29
PTPRN-210ENST00000460801 WNK3Q9BYP7 1800 aa16.84■□□□□ 0.29
PTPRN-210ENST00000460801 STARD3NLO95772 234 aa16.84■□□□□ 0.29
PTPRN-210ENST00000460801 PTH1RQ03431 593 aa16.83■□□□□ 0.28
PTPRN-210ENST00000460801 RASEFQ8IZ41 740 aa16.83■□□□□ 0.28
PTPRN-210ENST00000460801 PTMSP20962 102 aa16.82■□□□□ 0.28
PTPRN-210ENST00000460801 ATG9AQ7Z3C6 839 aa16.82■□□□□ 0.28
PTPRN-210ENST00000460801 KCNB2Q92953 911 aa16.82■□□□□ 0.28
PTPRN-210ENST00000460801 INTS4Q96HW7 963 aaKnown RBP16.82■□□□□ 0.28
PTPRN-210ENST00000460801 KAT6BQ8WYB5 2073 aa16.81■□□□□ 0.28
PTPRN-210ENST00000460801 NMIQ13287 307 aaPredicted RBP16.81■□□□□ 0.28
PTPRN-210ENST00000460801 FAM227BQ96M60 508 aa16.81■□□□□ 0.28
PTPRN-210ENST00000460801 SLC4A9Q96Q91 983 aa16.81■□□□□ 0.28
PTPRN-210ENST00000460801 CHMP3Q9Y3E7 222 aa16.81■□□□□ 0.28
PTPRN-210ENST00000460801 BAG4O95429 457 aaKnown RBP16.81■□□□□ 0.28
PTPRN-210ENST00000460801 PKP1Q13835 747 aa16.81■□□□□ 0.28
PTPRN-210ENST00000460801 KIF6Q6ZMV9 814 aa16.81■□□□□ 0.28
PTPRN-210ENST00000460801 TTC14Q96N46 770 aa16.81■□□□□ 0.28
PTPRN-210ENST00000460801 FSD1Q9BTV5 496 aa16.81■□□□□ 0.28
PTPRN-210ENST00000460801 GPR108Q9NPR9 543 aa16.81■□□□□ 0.28
PTPRN-210ENST00000460801 CCDC171Q6TFL3 1326 aa16.81■□□□□ 0.28
PTPRN-210ENST00000460801 DBNDD2Q9BQY9 259 aa16.8■□□□□ 0.28
PTPRN-210ENST00000460801 CDCA7Q9BWT1 371 aaPredicted RBP16.8■□□□□ 0.28
PTPRN-210ENST00000460801 CYP19A1P11511 503 aaPredicted RBP16.8■□□□□ 0.28
PTPRN-210ENST00000460801 IL15P40933 162 aaPredicted RBP16.8■□□□□ 0.28
PTPRN-210ENST00000460801 NECTIN1Q15223 517 aa16.8■□□□□ 0.28
PTPRN-210ENST00000460801 MAP4K1Q92918 833 aa16.8■□□□□ 0.28
PTPRN-210ENST00000460801 ZDHHC9Q9Y397 364 aa16.8■□□□□ 0.28
PTPRN-210ENST00000460801 ZNF330Q9Y3S2 320 aaPredicted RBP16.8■□□□□ 0.28
PTPRN-210ENST00000460801 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.79■□□□□ 0.28
PTPRN-210ENST00000460801 MAP3K15Q6ZN16 1313 aa16.79■□□□□ 0.28
PTPRN-210ENST00000460801 PCCAP05165 728 aaPredicted RBP16.79■□□□□ 0.28
PTPRN-210ENST00000460801 SKOR2Q2VWA4 1001 aaPredicted RBP16.79■□□□□ 0.28
PTPRN-210ENST00000460801 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
PTPRN-210ENST00000460801 NRAPQ86VF7 1730 aa16.79■□□□□ 0.28
PTPRN-210ENST00000460801 SPATA31A1Q5TZJ5 1347 aa16.78■□□□□ 0.28
PTPRN-210ENST00000460801 A0A0D9SFI3 127 aa16.78■□□□□ 0.28
PTPRN-210ENST00000460801 EYA2O00167 538 aa16.78■□□□□ 0.28
PTPRN-210ENST00000460801 CIAO1O76071 339 aa16.78■□□□□ 0.28
PTPRN-210ENST00000460801 GIGYF2Q6Y7W6 1299 aaKnown RBP16.78■□□□□ 0.28
PTPRN-210ENST00000460801 THRAP3Q9Y2W1 955 aaKnown RBP16.78■□□□□ 0.28
PTPRN-210ENST00000460801 RFX7Q2KHR2 1363 aa16.78■□□□□ 0.28
PTPRN-210ENST00000460801 MED23Q9ULK4 1368 aa16.78■□□□□ 0.28
PTPRN-210ENST00000460801 GOLGA6L22H0YM25 854 aa16.78■□□□□ 0.28
PTPRN-210ENST00000460801 EDC3Q96F86 508 aaKnown RBP16.78■□□□□ 0.28
PTPRN-210ENST00000460801 HAUS7Q99871 368 aa16.78■□□□□ 0.28
PTPRN-210ENST00000460801 PLA2G12BQ9BX93 195 aa16.78■□□□□ 0.28
PTPRN-210ENST00000460801 TM6SF1Q9BZW5 370 aa16.78■□□□□ 0.28
PTPRN-210ENST00000460801 PRPF40BQ6NWY9 871 aaKnown RBP16.77■□□□□ 0.28
PTPRN-210ENST00000460801 NOL8Q76FK4 1167 aaKnown RBP16.77■□□□□ 0.28
PTPRN-210ENST00000460801 GZF1Q9H116 711 aaPredicted RBP16.77■□□□□ 0.28
PTPRN-210ENST00000460801 RBM8AQ9Y5S9 174 aaKnown RBP16.77■□□□□ 0.28
PTPRN-210ENST00000460801 ADAMTS2O95450 1211 aa16.77■□□□□ 0.27
PTPRN-210ENST00000460801 PRIM1P49642 420 aaKnown RBP16.77■□□□□ 0.27
PTPRN-210ENST00000460801 ZBTB38Q8NAP3 1195 aaPredicted RBP16.77■□□□□ 0.27
PTPRN-210ENST00000460801 JCADQ9P266 1359 aa16.76■□□□□ 0.27
PTPRN-210ENST00000460801 AK2P54819 239 aa16.76■□□□□ 0.27
PTPRN-210ENST00000460801 LRRC24Q50LG9 513 aa16.76■□□□□ 0.27
PTPRN-210ENST00000460801 ZNF594Q96JF6 807 aaPredicted RBP16.76■□□□□ 0.27
PTPRN-210ENST00000460801 ZSWIM6Q9HCJ5 1215 aa16.76■□□□□ 0.27
PTPRN-210ENST00000460801 DOT1LQ8TEK3 1739 aa16.76■□□□□ 0.27
PTPRN-210ENST00000460801 CASTP20810 708 aaKnown RBP16.76■□□□□ 0.27
PTPRN-210ENST00000460801 SYTL4Q96C24 671 aaPredicted RBP16.76■□□□□ 0.27
PTPRN-210ENST00000460801 FBXO3Q9UK99 471 aa16.76■□□□□ 0.27
PTPRN-210ENST00000460801 CSF1RP07333 972 aa16.75■□□□□ 0.27
PTPRN-210ENST00000460801 HLFQ16534 295 aa16.75■□□□□ 0.27
PTPRN-210ENST00000460801 ADCK5Q3MIX3 580 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms