RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.63□□□□□ -0.23
CSDC2-202ENST00000460790 GPTP24298 496 aa13.63□□□□□ -0.23
CSDC2-202ENST00000460790 RFC4P35249 363 aa13.63□□□□□ -0.23
CSDC2-202ENST00000460790 USPL1Q5W0Q7 1092 aa13.63□□□□□ -0.23
CSDC2-202ENST00000460790 UBE3BQ7Z3V4 1068 aa13.63□□□□□ -0.23
CSDC2-202ENST00000460790 JARID2Q92833 1246 aaPredicted RBP13.63□□□□□ -0.23
CSDC2-202ENST00000460790 KAZALD1Q96I82 304 aa13.63□□□□□ -0.23
CSDC2-202ENST00000460790 SUCLG2Q96I99 432 aa13.63□□□□□ -0.23
CSDC2-202ENST00000460790 BCL2L12Q9HB09 334 aa13.63□□□□□ -0.23
CSDC2-202ENST00000460790 C4AP0C0L4 1744 aa13.63□□□□□ -0.23
CSDC2-202ENST00000460790 PHF14O94880 888 aa13.62□□□□□ -0.23
CSDC2-202ENST00000460790 PCCAP05165 728 aaPredicted RBP13.62□□□□□ -0.23
CSDC2-202ENST00000460790 ZNF827Q17R98 1081 aa13.62□□□□□ -0.23
CSDC2-202ENST00000460790 PARP10Q53GL7 1025 aa13.62□□□□□ -0.23
CSDC2-202ENST00000460790 ZBTB38Q8NAP3 1195 aaPredicted RBP13.62□□□□□ -0.23
CSDC2-202ENST00000460790 SRP68Q9UHB9 627 aaKnown RBP13.62□□□□□ -0.23
CSDC2-202ENST00000460790 SCN7AQ01118 1682 aa13.62□□□□□ -0.23
CSDC2-202ENST00000460790 UBN2Q6ZU65 1347 aa13.62□□□□□ -0.23
CSDC2-202ENST00000460790 USP42Q9H9J4 1324 aaKnown RBP13.62□□□□□ -0.23
CSDC2-202ENST00000460790 HMMRO75330 724 aa13.61□□□□□ -0.23
CSDC2-202ENST00000460790 MTX1Q13505 466 aa13.61□□□□□ -0.23
CSDC2-202ENST00000460790 PPP1R42Q7Z4L9 355 aa13.61□□□□□ -0.23
CSDC2-202ENST00000460790 SMC5Q8IY18 1101 aa13.61□□□□□ -0.23
CSDC2-202ENST00000460790 DCTPP1Q9H773 170 aa13.61□□□□□ -0.23
CSDC2-202ENST00000460790 TFCP2L1Q9NZI6 479 aa13.61□□□□□ -0.23
CSDC2-202ENST00000460790 NIP7Q9Y221 180 aaKnown RBP eCLIP13.61□□□□□ -0.23
CSDC2-202ENST00000460790 TUBGCP6Q96RT7 1819 aa13.61□□□□□ -0.23
CSDC2-202ENST00000460790 PNMA6EA0A0J9YXQ4 647 aa13.6□□□□□ -0.23
CSDC2-202ENST00000460790 POLA2Q14181 598 aa13.6□□□□□ -0.23
CSDC2-202ENST00000460790 EPHA10Q5JZY3 1008 aa13.6□□□□□ -0.23
CSDC2-202ENST00000460790 SUSD4Q5VX71 490 aa13.6□□□□□ -0.23
CSDC2-202ENST00000460790 DEFB132Q7Z7B7 95 aa13.6□□□□□ -0.23
CSDC2-202ENST00000460790 FLAD1Q8NFF5 587 aa13.6□□□□□ -0.23
CSDC2-202ENST00000460790 SSH3Q8TE77 659 aa13.6□□□□□ -0.23
CSDC2-202ENST00000460790 GCC1Q96CN9 775 aa13.6□□□□□ -0.23
CSDC2-202ENST00000460790 FAM89AQ96GI7 184 aa13.6□□□□□ -0.23
CSDC2-202ENST00000460790 PLA2G12BQ9BX93 195 aa13.6□□□□□ -0.23
CSDC2-202ENST00000460790 BICC1Q9H694 974 aaKnown RBP13.6□□□□□ -0.23
CSDC2-202ENST00000460790 TRMT112Q9UI30 125 aaKnown RBP13.6□□□□□ -0.23
CSDC2-202ENST00000460790 CDHR2Q9BYE9 1310 aa13.6□□□□□ -0.23
CSDC2-202ENST00000460790 MYH3P11055 1940 aa13.59□□□□□ -0.23
CSDC2-202ENST00000460790 FOXO4P98177 505 aa13.59□□□□□ -0.23
CSDC2-202ENST00000460790 RABL6Q3YEC7 729 aaPredicted RBP13.59□□□□□ -0.23
CSDC2-202ENST00000460790 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
CSDC2-202ENST00000460790 TBC1D9BQ66K14 1250 aa13.59□□□□□ -0.23
CSDC2-202ENST00000460790 UTP14AQ9BVJ6 771 aaKnown RBP13.59□□□□□ -0.23
CSDC2-202ENST00000460790 SRGAP3O43295 1099 aa13.58□□□□□ -0.24
CSDC2-202ENST00000460790 COL23A1Q86Y22 540 aaPredicted RBP13.58□□□□□ -0.24
CSDC2-202ENST00000460790 SYNE4Q8N205 404 aa13.58□□□□□ -0.24
CSDC2-202ENST00000460790 SETDB2Q96T68 719 aa13.58□□□□□ -0.24
CSDC2-202ENST00000460790 QSER1Q2KHR3 1735 aa13.57□□□□□ -0.24
CSDC2-202ENST00000460790 NTSR2O95665 410 aa13.57□□□□□ -0.24
CSDC2-202ENST00000460790 GYS1P13807 737 aa13.57□□□□□ -0.24
CSDC2-202ENST00000460790 SLC15A2Q16348 729 aa13.57□□□□□ -0.24
CSDC2-202ENST00000460790 BICDL1Q6ZP65 573 aa13.57□□□□□ -0.24
CSDC2-202ENST00000460790 SH3TC1Q8TE82 1336 aa13.57□□□□□ -0.24
CSDC2-202ENST00000460790 IRS4O14654 1257 aaPredicted RBP13.56□□□□□ -0.24
CSDC2-202ENST00000460790 CSF1RP07333 972 aa13.56□□□□□ -0.24
CSDC2-202ENST00000460790 LMBR1LQ6UX01 489 aa13.56□□□□□ -0.24
CSDC2-202ENST00000460790 ANO8Q9HCE9 1232 aaPredicted RBP13.56□□□□□ -0.24
CSDC2-202ENST00000460790 STK32BQ9NY57 414 aa13.56□□□□□ -0.24
CSDC2-202ENST00000460790 PDZRN3Q9UPQ7 1066 aa13.56□□□□□ -0.24
CSDC2-202ENST00000460790 PNPLA7Q6ZV29 1317 aa13.56□□□□□ -0.24
CSDC2-202ENST00000460790 COL24A1Q17RW2 1714 aa13.56□□□□□ -0.24
CSDC2-202ENST00000460790 FAM177BA6PVY3 158 aa13.55□□□□□ -0.24
CSDC2-202ENST00000460790 PDE8AO60658 829 aa13.55□□□□□ -0.24
CSDC2-202ENST00000460790 TM4SF1P30408 202 aa13.55□□□□□ -0.24
CSDC2-202ENST00000460790 NFIXQ14938 502 aa13.55□□□□□ -0.24
CSDC2-202ENST00000460790 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.24
CSDC2-202ENST00000460790 NYXQ9GZU5 481 aa13.55□□□□□ -0.24
CSDC2-202ENST00000460790 NOP58Q9Y2X3 529 aaKnown RBP13.55□□□□□ -0.24
CSDC2-202ENST00000460790 DDX60Q8IY21 1712 aaKnown RBP13.54□□□□□ -0.24
CSDC2-202ENST00000460790 HSP90B1P14625 803 aaKnown RBP13.54□□□□□ -0.24
CSDC2-202ENST00000460790 RFX5P48382 616 aaPredicted RBP13.54□□□□□ -0.24
CSDC2-202ENST00000460790 NUCB1Q02818 461 aa13.54□□□□□ -0.24
CSDC2-202ENST00000460790 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
CSDC2-202ENST00000460790 ANKRD45Q5TZF3 282 aa13.54□□□□□ -0.24
CSDC2-202ENST00000460790 TPTE2Q6XPS3 522 aa13.54□□□□□ -0.24
CSDC2-202ENST00000460790 NLGN1Q8N2Q7 840 aa13.54□□□□□ -0.24
CSDC2-202ENST00000460790 MSH5O43196 834 aa13.53□□□□□ -0.24
CSDC2-202ENST00000460790 RAB11FIP3O75154 756 aa13.53□□□□□ -0.24
CSDC2-202ENST00000460790 SURF6O75683 361 aaKnown RBP13.53□□□□□ -0.24
CSDC2-202ENST00000460790 ERFEQ4G0M1 354 aa13.53□□□□□ -0.24
CSDC2-202ENST00000460790 NBPF5PQ86XG9 351 aaPredicted RBP13.53□□□□□ -0.24
CSDC2-202ENST00000460790 NUTM1Q86Y26 1132 aa13.53□□□□□ -0.24
CSDC2-202ENST00000460790 TTLL11Q8NHH1 800 aa13.53□□□□□ -0.24
CSDC2-202ENST00000460790 COPRSQ9NQ92 184 aa13.53□□□□□ -0.24
CSDC2-202ENST00000460790 EXOC6BQ9Y2D4 811 aa13.53□□□□□ -0.24
CSDC2-202ENST00000460790 LAMB2P55268 1798 aa13.53□□□□□ -0.24
CSDC2-202ENST00000460790 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.25
CSDC2-202ENST00000460790 CTSWP56202 376 aa13.52□□□□□ -0.25
CSDC2-202ENST00000460790 HSP90AB4PQ58FF6 505 aa13.52□□□□□ -0.25
CSDC2-202ENST00000460790 CHD1LQ86WJ1 897 aa13.52□□□□□ -0.25
CSDC2-202ENST00000460790 CHMP3Q9Y3E7 222 aa13.52□□□□□ -0.25
CSDC2-202ENST00000460790 CARMIL3Q8ND23 1372 aa13.52□□□□□ -0.25
CSDC2-202ENST00000460790 GTF2E1P29083 439 aaPredicted RBP13.51□□□□□ -0.25
CSDC2-202ENST00000460790 PTPN12Q05209 780 aaKnown RBP13.51□□□□□ -0.25
CSDC2-202ENST00000460790 PA2G4Q9UQ80 394 aaKnown RBP13.51□□□□□ -0.25
CSDC2-202ENST00000460790 CASZ1Q86V15 1759 aa13.5□□□□□ -0.25
CSDC2-202ENST00000460790 SERPINB2P05120 415 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms