RNA–Protein interactions for RNA: ENST00000460721.1

LDOC1-202, Transcript of LDOC1, regulator of NFKB signaling, humanhuman

TSL 1 (best)

Gene LDOC1, Length 784 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDOC1-202ENST00000460721 NPR1P16066 1061 aa19.87■□□□□ 0.77
LDOC1-202ENST00000460721 TWISTNBQ3B726 338 aaPredicted RBP19.87■□□□□ 0.77
LDOC1-202ENST00000460721 NLRP10Q86W26 655 aa19.87■□□□□ 0.77
LDOC1-202ENST00000460721 ISCA1Q9BUE6 129 aa19.87■□□□□ 0.77
LDOC1-202ENST00000460721 CACNA1SQ13698 1873 aa19.87■□□□□ 0.77
LDOC1-202ENST00000460721 FER1L6Q2WGJ9 1857 aa19.87■□□□□ 0.77
LDOC1-202ENST00000460721 RNF123Q5XPI4 1314 aa19.86■□□□□ 0.77
LDOC1-202ENST00000460721 GTF2E1P29083 439 aaPredicted RBP19.86■□□□□ 0.77
LDOC1-202ENST00000460721 TRIM28Q13263 835 aaKnown RBP19.86■□□□□ 0.77
LDOC1-202ENST00000460721 C7orf43Q8WVR3 580 aa19.86■□□□□ 0.77
LDOC1-202ENST00000460721 VAMP4O75379 141 aa19.85■□□□□ 0.77
LDOC1-202ENST00000460721 UTP14AQ9BVJ6 771 aaKnown RBP19.85■□□□□ 0.77
LDOC1-202ENST00000460721 CCDC88AQ3V6T2 1871 aa19.84■□□□□ 0.77
LDOC1-202ENST00000460721 HOXA10P31260 410 aaPredicted RBP19.83■□□□□ 0.77
LDOC1-202ENST00000460721 GOLGA2Q08379 1002 aa19.83■□□□□ 0.77
LDOC1-202ENST00000460721 PRPF40BQ6NWY9 871 aaKnown RBP19.83■□□□□ 0.77
LDOC1-202ENST00000460721 NFKBIEO00221 500 aa19.82■□□□□ 0.76
LDOC1-202ENST00000460721 PRELPP51888 382 aa19.82■□□□□ 0.76
LDOC1-202ENST00000460721 EXOSC9Q06265 439 aaKnown RBP19.82■□□□□ 0.76
LDOC1-202ENST00000460721 LAMB2P55268 1798 aa19.82■□□□□ 0.76
LDOC1-202ENST00000460721 C21orf2O43822 256 aa19.81■□□□□ 0.76
LDOC1-202ENST00000460721 ALDH1B1P30837 517 aa19.81■□□□□ 0.76
LDOC1-202ENST00000460721 C9orf131Q5VYM1 1079 aa19.81■□□□□ 0.76
LDOC1-202ENST00000460721 MYH16Q9H6N6 1097 aa19.81■□□□□ 0.76
LDOC1-202ENST00000460721 LTBP3Q9NS15 1303 aa19.8■□□□□ 0.76
LDOC1-202ENST00000460721 DIEXFQ68CQ4 756 aaKnown RBP19.8■□□□□ 0.76
LDOC1-202ENST00000460721 C3orf67Q6ZVT6 689 aa19.8■□□□□ 0.76
LDOC1-202ENST00000460721 RIC3Q7Z5B4 369 aa19.8■□□□□ 0.76
LDOC1-202ENST00000460721 DICER1Q9UPY3 1922 aaKnown RBP19.8■□□□□ 0.76
LDOC1-202ENST00000460721 DDX60Q8IY21 1712 aaKnown RBP19.79■□□□□ 0.76
LDOC1-202ENST00000460721 SH3TC1Q8TE82 1336 aa19.79■□□□□ 0.76
LDOC1-202ENST00000460721 SNED1Q8TER0 1413 aa19.79■□□□□ 0.76
LDOC1-202ENST00000460721 ATP5J2-PTCD1G3V325 749 aa19.79■□□□□ 0.76
LDOC1-202ENST00000460721 RASSF7Q02833 373 aa19.79■□□□□ 0.76
LDOC1-202ENST00000460721 G2E3Q7L622 706 aa19.79■□□□□ 0.76
LDOC1-202ENST00000460721 SYNE4Q8N205 404 aa19.79■□□□□ 0.76
LDOC1-202ENST00000460721 NLRP3Q96P20 1036 aa19.79■□□□□ 0.76
LDOC1-202ENST00000460721 METTL22Q9BUU2 404 aaPredicted RBP19.79■□□□□ 0.76
LDOC1-202ENST00000460721 STK31Q9BXU1 1019 aa19.79■□□□□ 0.76
LDOC1-202ENST00000460721 TRMT112Q9UI30 125 aaKnown RBP19.79■□□□□ 0.76
LDOC1-202ENST00000460721 SLC4A2P04920 1241 aa19.78■□□□□ 0.76
LDOC1-202ENST00000460721 SOGA3Q5TF21 947 aa19.78■□□□□ 0.76
LDOC1-202ENST00000460721 KSR2Q6VAB6 950 aa19.78■□□□□ 0.76
LDOC1-202ENST00000460721 CRAMP1Q96RY5 1269 aa19.78■□□□□ 0.76
LDOC1-202ENST00000460721 TCERG1O14776 1098 aaKnown RBP19.77■□□□□ 0.76
LDOC1-202ENST00000460721 DDX58O95786 925 aaKnown RBP19.77■□□□□ 0.76
LDOC1-202ENST00000460721 LMNB1P20700 586 aa19.77■□□□□ 0.76
LDOC1-202ENST00000460721 RNF181Q9P0P0 153 aa19.77■□□□□ 0.76
LDOC1-202ENST00000460721 ZC3H4Q9UPT8 1303 aaKnown RBP19.76■□□□□ 0.75
LDOC1-202ENST00000460721 PI4KAP2A4QPH2 592 aa19.76■□□□□ 0.75
LDOC1-202ENST00000460721 MIER1Q8N108 512 aa19.76■□□□□ 0.75
LDOC1-202ENST00000460721 PI4KAP1Q8N8J0 262 aa19.76■□□□□ 0.75
LDOC1-202ENST00000460721 CCDC191Q8NCU4 936 aa19.76■□□□□ 0.75
LDOC1-202ENST00000460721 RBM17Q96I25 401 aaKnown RBP19.76■□□□□ 0.75
LDOC1-202ENST00000460721 ZNF219Q9P2Y4 722 aaPredicted RBP19.76■□□□□ 0.75
LDOC1-202ENST00000460721 HCLS1P14317 486 aaPredicted RBP19.75■□□□□ 0.75
LDOC1-202ENST00000460721 SLFN5Q08AF3 891 aa19.75■□□□□ 0.75
LDOC1-202ENST00000460721 FAM89AQ96GI7 184 aa19.75■□□□□ 0.75
LDOC1-202ENST00000460721 MYD88Q99836 296 aa19.75■□□□□ 0.75
LDOC1-202ENST00000460721 MAP3K2Q9Y2U5 619 aa19.75■□□□□ 0.75
LDOC1-202ENST00000460721 E9PSI1 815 aa19.74■□□□□ 0.75
LDOC1-202ENST00000460721 FLIIQ13045 1269 aa19.74■□□□□ 0.75
LDOC1-202ENST00000460721 CCDC93Q567U6 631 aa19.74■□□□□ 0.75
LDOC1-202ENST00000460721 TRMT2AQ8IZ69 625 aaKnown RBP19.74■□□□□ 0.75
LDOC1-202ENST00000460721 ZBTB38Q8NAP3 1195 aaPredicted RBP19.74■□□□□ 0.75
LDOC1-202ENST00000460721 RPGRQ92834 1020 aaKnown RBP19.74■□□□□ 0.75
LDOC1-202ENST00000460721 IGKV5-2P06315 115 aa19.73■□□□□ 0.75
LDOC1-202ENST00000460721 SF3B3Q15393 1217 aaKnown RBP19.73■□□□□ 0.75
LDOC1-202ENST00000460721 TAOK3Q9H2K8 898 aa19.73■□□□□ 0.75
LDOC1-202ENST00000460721 PCCAP05165 728 aaPredicted RBP19.72■□□□□ 0.75
LDOC1-202ENST00000460721 CC2D2BQ6DHV5 1058 aa19.72■□□□□ 0.75
LDOC1-202ENST00000460721 OLFM4Q6UX06 510 aa19.72■□□□□ 0.75
LDOC1-202ENST00000460721 TIAM2Q8IVF5 1701 aa19.72■□□□□ 0.75
LDOC1-202ENST00000460721 GPBP1L1Q9HC44 474 aaPredicted RBP19.72■□□□□ 0.75
LDOC1-202ENST00000460721 ABCC4O15439 1325 aa19.72■□□□□ 0.75
LDOC1-202ENST00000460721 TAF1P21675 1872 aa19.71■□□□□ 0.75
LDOC1-202ENST00000460721 FKBP4Q02790 459 aaKnown RBP eCLIP19.71■□□□□ 0.75
LDOC1-202ENST00000460721 RTKN2Q8IZC4 609 aa19.71■□□□□ 0.75
LDOC1-202ENST00000460721 CWC25Q9NXE8 425 aaPredicted RBP19.71■□□□□ 0.75
LDOC1-202ENST00000460721 IRS4O14654 1257 aaPredicted RBP19.7■□□□□ 0.74
LDOC1-202ENST00000460721 ZNF428Q96B54 188 aa19.7■□□□□ 0.74
LDOC1-202ENST00000460721 KIF3CO14782 793 aa19.69■□□□□ 0.74
LDOC1-202ENST00000460721 BBOX1O75936 387 aa19.69■□□□□ 0.74
LDOC1-202ENST00000460721 GRIPAP1Q4V328 841 aa19.69■□□□□ 0.74
LDOC1-202ENST00000460721 CDCA7LQ96GN5 454 aa19.69■□□□□ 0.74
LDOC1-202ENST00000460721 PSMD1Q99460 953 aa19.69■□□□□ 0.74
LDOC1-202ENST00000460721 CDHR2Q9BYE9 1310 aa19.69■□□□□ 0.74
LDOC1-202ENST00000460721 NEURL1BA8MQ27 555 aa19.68■□□□□ 0.74
LDOC1-202ENST00000460721 PPEF1O14829 653 aaPredicted RBP19.68■□□□□ 0.74
LDOC1-202ENST00000460721 GRAPQ13588 217 aa19.68■□□□□ 0.74
LDOC1-202ENST00000460721 GRAPLQ8TC17 118 aaPredicted RBP19.68■□□□□ 0.74
LDOC1-202ENST00000460721 ZNF526Q8TF50 670 aaPredicted RBP19.68■□□□□ 0.74
LDOC1-202ENST00000460721 DNAAF4Q8WXU2 420 aa19.68■□□□□ 0.74
LDOC1-202ENST00000460721 ATP6V0A2Q9Y487 856 aa19.68■□□□□ 0.74
LDOC1-202ENST00000460721 NEXNQ0ZGT2 675 aa19.67■□□□□ 0.74
LDOC1-202ENST00000460721 FKBP5Q13451 457 aaPredicted RBP19.67■□□□□ 0.74
LDOC1-202ENST00000460721 RTL5Q5HYW3 569 aaPredicted RBP19.67■□□□□ 0.74
LDOC1-202ENST00000460721 DDX46Q7L014 1031 aaKnown RBP19.67■□□□□ 0.74
LDOC1-202ENST00000460721 SLC51AQ86UW1 340 aa19.67■□□□□ 0.74
LDOC1-202ENST00000460721 SP8Q8IXZ3 490 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms