RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 XRN1Q8IZH2 1706 aaKnown RBP7.34□□□□□ -1.24
HLA-DQA1-205ENST00000460633 CCDC66A2RUB6 948 aa7.34□□□□□ -1.24
HLA-DQA1-205ENST00000460633 H0YIN7 160 aa7.34□□□□□ -1.24
HLA-DQA1-205ENST00000460633 TAF12Q16514 161 aa7.34□□□□□ -1.24
HLA-DQA1-205ENST00000460633 NBPF3Q9H094 633 aa7.34□□□□□ -1.24
HLA-DQA1-205ENST00000460633 PCDH11XQ9BZA7 1347 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 PCDH11YQ9BZA8 1340 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 SIGLEC1Q9BZZ2 1709 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 ZEB2O60315 1214 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 APBA3O96018 575 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 MATR3P43243 847 aaKnown RBP eCLIP7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 DZIP1Q86YF9 867 aaKnown RBP7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 CCDC97Q96F63 343 aaPredicted RBP7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 NEUROD6Q96NK8 337 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 SLC5A1P13866 664 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 RBM25P49756 843 aaKnown RBP7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 GRIPAP1Q4V328 841 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 NBPF6Q5VWK0 638 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 FAM196AQ6ZSG2 479 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 NBPF5PQ86XG9 351 aaPredicted RBP7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 CERS3Q8IU89 383 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 NBPF4Q96M43 638 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 SLC12A5Q9H2X9 1139 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 BABAM1Q9NWV8 329 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 INSRP06213 1382 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 PRC1O43663 620 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 CT47B1P0C2W7 299 aaPredicted RBP7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 CCDC125Q86Z20 511 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 TCP11L2Q8N4U5 519 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 K7ELQ4 463 aaPredicted RBP7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 IL2RBP14784 551 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 HOMER1Q86YM7 354 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 PPP2R3CQ969Q6 453 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 ANO2Q9NQ90 1003 aa7.33□□□□□ -1.24
HLA-DQA1-205ENST00000460633 RIPK4P57078 832 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 CBX1P83916 185 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 MST1RQ04912 1400 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 ZNF804AQ7Z570 1209 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 PICK1Q9NRD5 415 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 MBD3O95983 291 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 PLCG2P16885 1265 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 SETQ01105 290 aaPredicted RBP7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 NIM1KQ8IY84 436 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 GGNBP2Q9H3C7 697 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 XPCQ01831 940 aaPredicted RBP7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 GPS2Q13227 327 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 TRAPPC3LQ5T215 181 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 IFNL2Q8IZJ0 200 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 SPC24Q8NBT2 197 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 TBC1D2Q9BYX2 928 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 POLR3DP05423 398 aaPredicted RBP7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 VIMP08670 466 aaKnown RBP7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 CLCN1P35523 988 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 IRX3P78415 501 aaPredicted RBP7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 TNFAIP1Q13829 316 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 UNC5CLQ8IV45 518 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 ANKRD24Q8TF21 1146 aa7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 ZHX1Q9UKY1 873 aaPredicted RBP7.32□□□□□ -1.24
HLA-DQA1-205ENST00000460633 UBTFL1P0CB47 393 aaPredicted RBP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 USP5P45974 858 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 RBM6P78332 1123 aaKnown RBP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 HACE1Q8IYU2 909 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 FAM200AQ8TCP9 573 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 ORC3Q9UBD5 711 aaPredicted RBP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 KDM2BQ8NHM5 1336 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 VPS37CA5D8V6 355 aaPredicted RBP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 PALM3A6NDB9 673 aaPredicted RBP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 XRCC6P12956 609 aaKnown RBP eCLIP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 ZNF428Q96B54 188 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 SEC63Q9UGP8 760 aaKnown RBP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 SMC3Q9UQE7 1217 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 CHD2O14647 1828 aaKnown RBP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 GCP02774 474 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 PSMA5P28066 241 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 SASS6Q6UVJ0 657 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 AEBP1Q8IUX7 1158 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 ADGRB1O14514 1584 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 ALDH1B1P30837 517 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 RABEP1Q15276 862 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 TPTE2Q6XPS3 522 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 CREBRFQ8IUR6 639 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 BICD2Q8TD16 824 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 DCPSQ96C86 337 aaKnown RBP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 SPATA32Q96LK8 384 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 FERMT1Q9BQL6 677 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 RAI14Q9P0K7 980 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 NOL7Q9UMY1 257 aaKnown RBP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 SOS2Q07890 1332 aaPredicted RBP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 A0A1W2PP64 1363 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 NUTM2GQ5VZR2 741 aa7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 PCMTD1Q96MG8 357 aaPredicted RBP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 LUC7LQ9NQ29 371 aaKnown RBP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 CIZ1Q9ULV3 898 aaPredicted RBP7.31□□□□□ -1.24
HLA-DQA1-205ENST00000460633 PPP1R12BO60237 982 aaPredicted RBP7.3□□□□□ -1.24
HLA-DQA1-205ENST00000460633 PANK2Q9BZ23 570 aa7.3□□□□□ -1.24
HLA-DQA1-205ENST00000460633 CTNNA3Q9UI47 895 aa7.3□□□□□ -1.24
HLA-DQA1-205ENST00000460633 FMN2Q9NZ56 1722 aa7.3□□□□□ -1.24
HLA-DQA1-205ENST00000460633 CDK12Q9NYV4 1490 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms