RNA–Protein interactions for RNA: ENST00000460625.1

UPK1B-202, Transcript of uroplakin 1B, humanhuman

TSL 1 (best) BASIC

Gene UPK1B, Length 1,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-202ENST00000460625 HSP90AB3PQ58FF7 597 aa13.53□□□□□ -0.24
UPK1B-202ENST00000460625 C16orf71Q8IYS4 520 aaPredicted RBP13.53□□□□□ -0.24
UPK1B-202ENST00000460625 ZNF34Q8IZ26 560 aa13.53□□□□□ -0.24
UPK1B-202ENST00000460625 SYNE4Q8N205 404 aa13.53□□□□□ -0.24
UPK1B-202ENST00000460625 PROM2Q8N271 834 aa13.53□□□□□ -0.24
UPK1B-202ENST00000460625 FAM89AQ96GI7 184 aa13.53□□□□□ -0.24
UPK1B-202ENST00000460625 HDAC5Q9UQL6 1122 aa13.53□□□□□ -0.24
UPK1B-202ENST00000460625 RPS6KA4O75676 772 aa13.52□□□□□ -0.24
UPK1B-202ENST00000460625 FOXO4P98177 505 aa13.52□□□□□ -0.24
UPK1B-202ENST00000460625 PA2G4Q9UQ80 394 aaKnown RBP13.52□□□□□ -0.24
UPK1B-202ENST00000460625 SURF6O75683 361 aaKnown RBP13.52□□□□□ -0.25
UPK1B-202ENST00000460625 RABL6Q3YEC7 729 aaPredicted RBP13.52□□□□□ -0.25
UPK1B-202ENST00000460625 OTUD7AQ8TE49 926 aaPredicted RBP13.52□□□□□ -0.25
UPK1B-202ENST00000460625 KLHDC4Q8TBB5 520 aa13.51□□□□□ -0.25
UPK1B-202ENST00000460625 PCCAP05165 728 aaPredicted RBP13.51□□□□□ -0.25
UPK1B-202ENST00000460625 LMBR1LQ6UX01 489 aa13.51□□□□□ -0.25
UPK1B-202ENST00000460625 ZBTB38Q8NAP3 1195 aaPredicted RBP13.51□□□□□ -0.25
UPK1B-202ENST00000460625 BCL2L12Q9HB09 334 aa13.51□□□□□ -0.25
UPK1B-202ENST00000460625 SRP68Q9UHB9 627 aaKnown RBP13.51□□□□□ -0.25
UPK1B-202ENST00000460625 TNS1Q9HBL0 1735 aaKnown RBP13.5□□□□□ -0.25
UPK1B-202ENST00000460625 SCN7AQ01118 1682 aa13.5□□□□□ -0.25
UPK1B-202ENST00000460625 APBA3O96018 575 aa13.5□□□□□ -0.25
UPK1B-202ENST00000460625 RFX5P48382 616 aaPredicted RBP13.5□□□□□ -0.25
UPK1B-202ENST00000460625 TXNRD1Q16881 649 aa13.5□□□□□ -0.25
UPK1B-202ENST00000460625 SLC27A3Q5K4L6 730 aa13.5□□□□□ -0.25
UPK1B-202ENST00000460625 SUSD4Q5VX71 490 aa13.5□□□□□ -0.25
UPK1B-202ENST00000460625 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
UPK1B-202ENST00000460625 NOP58Q9Y2X3 529 aaKnown RBP13.5□□□□□ -0.25
UPK1B-202ENST00000460625 RTCBQ9Y3I0 505 aaKnown RBP13.5□□□□□ -0.25
UPK1B-202ENST00000460625 C4AP0C0L4 1744 aa13.5□□□□□ -0.25
UPK1B-202ENST00000460625 UBR3Q6ZT12 1888 aa13.49□□□□□ -0.25
UPK1B-202ENST00000460625 PHF14O94880 888 aa13.49□□□□□ -0.25
UPK1B-202ENST00000460625 USPL1Q5W0Q7 1092 aa13.49□□□□□ -0.25
UPK1B-202ENST00000460625 AK7Q96M32 723 aa13.49□□□□□ -0.25
UPK1B-202ENST00000460625 LRRCC1Q9C099 1032 aa13.49□□□□□ -0.25
UPK1B-202ENST00000460625 FAM177BA6PVY3 158 aa13.49□□□□□ -0.25
UPK1B-202ENST00000460625 PLEKHM2Q8IWE5 1019 aa13.49□□□□□ -0.25
UPK1B-202ENST00000460625 IL1RAPL2Q9NP60 686 aa13.49□□□□□ -0.25
UPK1B-202ENST00000460625 NARFQ9UHQ1 456 aa13.49□□□□□ -0.25
UPK1B-202ENST00000460625 TRMT112Q9UI30 125 aaKnown RBP13.49□□□□□ -0.25
UPK1B-202ENST00000460625 NIP7Q9Y221 180 aaKnown RBP eCLIP13.49□□□□□ -0.25
UPK1B-202ENST00000460625 PLSCR1O15162 318 aa13.48□□□□□ -0.25
UPK1B-202ENST00000460625 C8orf34Q49A92 452 aa13.48□□□□□ -0.25
UPK1B-202ENST00000460625 RHPN1Q8TCX5 695 aa13.48□□□□□ -0.25
UPK1B-202ENST00000460625 SIL1Q9H173 461 aa13.48□□□□□ -0.25
UPK1B-202ENST00000460625 CHMP3Q9Y3E7 222 aa13.48□□□□□ -0.25
UPK1B-202ENST00000460625 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.48□□□□□ -0.25
UPK1B-202ENST00000460625 CDHR2Q9BYE9 1310 aa13.47□□□□□ -0.25
UPK1B-202ENST00000460625 RAB11FIP3O75154 756 aa13.47□□□□□ -0.25
UPK1B-202ENST00000460625 PTPN12Q05209 780 aaKnown RBP13.47□□□□□ -0.25
UPK1B-202ENST00000460625 CLEC4GQ6UXB4 293 aa13.47□□□□□ -0.25
UPK1B-202ENST00000460625 CCDC85AQ96PX6 553 aaPredicted RBP13.47□□□□□ -0.25
UPK1B-202ENST00000460625 BACH2Q9BYV9 841 aa13.47□□□□□ -0.25
UPK1B-202ENST00000460625 ZBTB47Q9UFB7 747 aaPredicted RBP13.47□□□□□ -0.25
UPK1B-202ENST00000460625 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
UPK1B-202ENST00000460625 TRAPPC3LQ5T215 181 aa13.47□□□□□ -0.25
UPK1B-202ENST00000460625 TBC1D9BQ66K14 1250 aa13.47□□□□□ -0.25
UPK1B-202ENST00000460625 PLA2G12BQ9BX93 195 aa13.47□□□□□ -0.25
UPK1B-202ENST00000460625 COPRSQ9NQ92 184 aa13.47□□□□□ -0.25
UPK1B-202ENST00000460625 ZNF652Q9Y2D9 606 aa13.47□□□□□ -0.25
UPK1B-202ENST00000460625 SALL3Q9BXA9 1300 aa13.46□□□□□ -0.25
UPK1B-202ENST00000460625 MYH3P11055 1940 aa13.46□□□□□ -0.25
UPK1B-202ENST00000460625 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.46□□□□□ -0.25
UPK1B-202ENST00000460625 SASH1O94885 1247 aa13.46□□□□□ -0.25
UPK1B-202ENST00000460625 NTSR2O95665 410 aa13.46□□□□□ -0.25
UPK1B-202ENST00000460625 OS9Q13438 667 aaPredicted RBP13.46□□□□□ -0.25
UPK1B-202ENST00000460625 FAM161AQ3B820 660 aa13.46□□□□□ -0.25
UPK1B-202ENST00000460625 BICDL1Q6ZP65 573 aa13.46□□□□□ -0.25
UPK1B-202ENST00000460625 UTP14AQ9BVJ6 771 aaKnown RBP13.46□□□□□ -0.25
UPK1B-202ENST00000460625 USP42Q9H9J4 1324 aaKnown RBP13.45□□□□□ -0.26
UPK1B-202ENST00000460625 ZPR1O75312 459 aa13.45□□□□□ -0.26
UPK1B-202ENST00000460625 PARP10Q53GL7 1025 aa13.45□□□□□ -0.26
UPK1B-202ENST00000460625 NUTM1Q86Y26 1132 aa13.45□□□□□ -0.26
UPK1B-202ENST00000460625 KIF1BPQ96EK5 621 aa13.45□□□□□ -0.26
UPK1B-202ENST00000460625 DDX60Q8IY21 1712 aaKnown RBP13.45□□□□□ -0.26
UPK1B-202ENST00000460625 CSF1RP07333 972 aa13.45□□□□□ -0.26
UPK1B-202ENST00000460625 HCLS1P14317 486 aaPredicted RBP13.45□□□□□ -0.26
UPK1B-202ENST00000460625 RFC4P35249 363 aa13.45□□□□□ -0.26
UPK1B-202ENST00000460625 G3BP1Q13283 466 aaKnown RBP eCLIP13.45□□□□□ -0.26
UPK1B-202ENST00000460625 ZNF827Q17R98 1081 aa13.45□□□□□ -0.26
UPK1B-202ENST00000460625 HSP90AB4PQ58FF6 505 aa13.45□□□□□ -0.26
UPK1B-202ENST00000460625 TSHZ3Q63HK5 1081 aa13.45□□□□□ -0.26
UPK1B-202ENST00000460625 ZNF594Q96JF6 807 aaPredicted RBP13.45□□□□□ -0.26
UPK1B-202ENST00000460625 SH3TC1Q8TE82 1336 aa13.44□□□□□ -0.26
UPK1B-202ENST00000460625 GSPT1P15170 499 aaKnown RBP13.44□□□□□ -0.26
UPK1B-202ENST00000460625 ILDR1Q86SU0 546 aaPredicted RBP13.44□□□□□ -0.26
UPK1B-202ENST00000460625 TTLL11Q8NHH1 800 aa13.44□□□□□ -0.26
UPK1B-202ENST00000460625 RGL2O15211 777 aa13.43□□□□□ -0.26
UPK1B-202ENST00000460625 CTSWP56202 376 aa13.43□□□□□ -0.26
UPK1B-202ENST00000460625 GREM2Q9H772 168 aa13.43□□□□□ -0.26
UPK1B-202ENST00000460625 RBM19Q9Y4C8 960 aaKnown RBP13.43□□□□□ -0.26
UPK1B-202ENST00000460625 COL24A1Q17RW2 1714 aa13.43□□□□□ -0.26
UPK1B-202ENST00000460625 PDE8AO60658 829 aa13.43□□□□□ -0.26
UPK1B-202ENST00000460625 ADRA2BP18089 450 aa13.43□□□□□ -0.26
UPK1B-202ENST00000460625 PDE1AP54750 535 aa13.43□□□□□ -0.26
UPK1B-202ENST00000460625 TUBGCP6Q96RT7 1819 aa13.42□□□□□ -0.26
UPK1B-202ENST00000460625 RGPD3A6NKT7 1758 aaPredicted RBP13.42□□□□□ -0.26
UPK1B-202ENST00000460625 RGPD4Q7Z3J3 1758 aa13.42□□□□□ -0.26
UPK1B-202ENST00000460625 SSFA2P28290 1259 aa13.42□□□□□ -0.26
UPK1B-202ENST00000460625 ERFEQ4G0M1 354 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms