RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 SRCIN1Q9C0H9 1055 aa13.92□□□□□ -0.18
SMNDC1-203ENST00000460483 NIP7Q9Y221 180 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMNDC1-203ENST00000460483 PARP3Q9Y6F1 533 aa13.92□□□□□ -0.18
SMNDC1-203ENST00000460483 RREB1Q92766 1687 aa13.91□□□□□ -0.18
SMNDC1-203ENST00000460483 GYS1P13807 737 aa13.91□□□□□ -0.18
SMNDC1-203ENST00000460483 G2E3Q7L622 706 aa13.91□□□□□ -0.18
SMNDC1-203ENST00000460483 CWC25Q9NXE8 425 aaPredicted RBP13.91□□□□□ -0.18
SMNDC1-203ENST00000460483 COL5A3P25940 1745 aaPredicted RBP13.9□□□□□ -0.18
SMNDC1-203ENST00000460483 MYD88Q99836 296 aa13.9□□□□□ -0.18
SMNDC1-203ENST00000460483 CARMIL3Q8ND23 1372 aa13.9□□□□□ -0.18
SMNDC1-203ENST00000460483 ATP10DQ9P241 1426 aa13.9□□□□□ -0.19
SMNDC1-203ENST00000460483 IBTKQ9P2D0 1353 aaPredicted RBP13.89□□□□□ -0.19
SMNDC1-203ENST00000460483 TRIM27P14373 513 aa13.89□□□□□ -0.19
SMNDC1-203ENST00000460483 RRP1P56182 461 aaKnown RBP13.89□□□□□ -0.19
SMNDC1-203ENST00000460483 ST5P78524 1137 aa13.89□□□□□ -0.19
SMNDC1-203ENST00000460483 NBPF5PQ86XG9 351 aaPredicted RBP13.89□□□□□ -0.19
SMNDC1-203ENST00000460483 ZNF34Q8IZ26 560 aa13.89□□□□□ -0.19
SMNDC1-203ENST00000460483 UTP14AQ9BVJ6 771 aaKnown RBP13.89□□□□□ -0.19
SMNDC1-203ENST00000460483 SPON1Q9HCB6 807 aa13.89□□□□□ -0.19
SMNDC1-203ENST00000460483 C9orf78Q9NZ63 289 aaPredicted RBP13.89□□□□□ -0.19
SMNDC1-203ENST00000460483 SRP68Q9UHB9 627 aaKnown RBP13.89□□□□□ -0.19
SMNDC1-203ENST00000460483 PDZRN3Q9UPQ7 1066 aa13.89□□□□□ -0.19
SMNDC1-203ENST00000460483 NEFLP07196 543 aa13.88□□□□□ -0.19
SMNDC1-203ENST00000460483 GNAI3P08754 354 aa13.88□□□□□ -0.19
SMNDC1-203ENST00000460483 AAMPQ13685 434 aa13.88□□□□□ -0.19
SMNDC1-203ENST00000460483 FKBP8Q14318 412 aa13.88□□□□□ -0.19
SMNDC1-203ENST00000460483 INTS3Q68E01 1043 aaKnown RBP13.88□□□□□ -0.19
SMNDC1-203ENST00000460483 ISCA1Q9BUE6 129 aa13.88□□□□□ -0.19
SMNDC1-203ENST00000460483 PXDNLA1KZ92 1463 aa13.87□□□□□ -0.19
SMNDC1-203ENST00000460483 ADCY9O60503 1353 aa13.87□□□□□ -0.19
SMNDC1-203ENST00000460483 PSDA5PKW4 1024 aaPredicted RBP13.87□□□□□ -0.19
SMNDC1-203ENST00000460483 HLFQ16534 295 aa13.87□□□□□ -0.19
SMNDC1-203ENST00000460483 BEND3Q5T5X7 828 aa13.87□□□□□ -0.19
SMNDC1-203ENST00000460483 BICDL1Q6ZP65 573 aa13.87□□□□□ -0.19
SMNDC1-203ENST00000460483 CNBD1Q8NA66 436 aa13.87□□□□□ -0.19
SMNDC1-203ENST00000460483 TRMT112Q9UI30 125 aaKnown RBP13.87□□□□□ -0.19
SMNDC1-203ENST00000460483 DDX19BQ9UMR2 479 aa13.87□□□□□ -0.19
SMNDC1-203ENST00000460483 ABCC4O15439 1325 aa13.87□□□□□ -0.19
SMNDC1-203ENST00000460483 NUP188Q5SRE5 1749 aa13.87□□□□□ -0.19
SMNDC1-203ENST00000460483 NEURL1BA8MQ27 555 aa13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 F6X3S4 739 aa13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 MMP10P09238 476 aa13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 GPTP24298 496 aa13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 TM4SF1P30408 202 aa13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 NFIXQ14938 502 aa13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 TBC1D9BQ66K14 1250 aa13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 NLRP10Q86W26 655 aa13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 AMIGO3Q86WK7 504 aa13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 ITPRIPQ8IWB1 547 aa13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 ZBTB38Q8NAP3 1195 aaPredicted RBP13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 CLUAP1Q96AJ1 413 aa13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 SUPT16HQ9Y5B9 1047 aaKnown RBP13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 SH3TC1Q8TE82 1336 aa13.86□□□□□ -0.19
SMNDC1-203ENST00000460483 TAF1LQ8IZX4 1826 aa13.85□□□□□ -0.19
SMNDC1-203ENST00000460483 ATP5J2-PTCD1G3V325 749 aa13.85□□□□□ -0.19
SMNDC1-203ENST00000460483 ZBTB7AO95365 584 aa13.85□□□□□ -0.19
SMNDC1-203ENST00000460483 SERPINB2P05120 415 aa13.85□□□□□ -0.19
SMNDC1-203ENST00000460483 GCKRQ14397 625 aa13.85□□□□□ -0.19
SMNDC1-203ENST00000460483 BCL2L12Q9HB09 334 aa13.85□□□□□ -0.19
SMNDC1-203ENST00000460483 GRM8O00222 908 aa13.84□□□□□ -0.19
SMNDC1-203ENST00000460483 PCCAP05165 728 aaPredicted RBP13.84□□□□□ -0.19
SMNDC1-203ENST00000460483 SMIM5Q71RC9 77 aa13.84□□□□□ -0.19
SMNDC1-203ENST00000460483 UBTFL1P0CB47 393 aaPredicted RBP13.83□□□□□ -0.2
SMNDC1-203ENST00000460483 PDE6BP35913 854 aa13.83□□□□□ -0.2
SMNDC1-203ENST00000460483 MVPQ14764 893 aaKnown RBP13.83□□□□□ -0.2
SMNDC1-203ENST00000460483 CWF19L2Q2TBE0 894 aaKnown RBP13.83□□□□□ -0.2
SMNDC1-203ENST00000460483 MSL1Q68DK7 614 aa13.83□□□□□ -0.2
SMNDC1-203ENST00000460483 NLRP3Q96P20 1036 aa13.83□□□□□ -0.2
SMNDC1-203ENST00000460483 PPP1R1BQ9UD71 204 aaPredicted RBP13.83□□□□□ -0.2
SMNDC1-203ENST00000460483 POLRMTO00411 1230 aaKnown RBP13.82□□□□□ -0.2
SMNDC1-203ENST00000460483 GALR2O43603 387 aaPredicted RBP13.82□□□□□ -0.2
SMNDC1-203ENST00000460483 IGKV5-2P06315 115 aa13.82□□□□□ -0.2
SMNDC1-203ENST00000460483 SUSD4Q5VX71 490 aa13.82□□□□□ -0.2
SMNDC1-203ENST00000460483 TMEM57Q8N5G2 664 aa13.82□□□□□ -0.2
SMNDC1-203ENST00000460483 BRIP1Q9BX63 1249 aa13.82□□□□□ -0.2
SMNDC1-203ENST00000460483 UBR3Q6ZT12 1888 aa13.81□□□□□ -0.2
SMNDC1-203ENST00000460483 FAM177BA6PVY3 158 aa13.81□□□□□ -0.2
SMNDC1-203ENST00000460483 H7C1W4 665 aa13.81□□□□□ -0.2
SMNDC1-203ENST00000460483 PLIN1O60240 522 aa13.81□□□□□ -0.2
SMNDC1-203ENST00000460483 SLC10A5Q5PT55 438 aa13.81□□□□□ -0.2
SMNDC1-203ENST00000460483 CDHR2Q9BYE9 1310 aa13.81□□□□□ -0.2
SMNDC1-203ENST00000460483 QSER1Q2KHR3 1735 aa13.81□□□□□ -0.2
SMNDC1-203ENST00000460483 CACNA1FO60840 1977 aa13.8□□□□□ -0.2
SMNDC1-203ENST00000460483 IRS4O14654 1257 aaPredicted RBP13.8□□□□□ -0.2
SMNDC1-203ENST00000460483 NTSR2O95665 410 aa13.8□□□□□ -0.2
SMNDC1-203ENST00000460483 GNAI2P04899 355 aa13.8□□□□□ -0.2
SMNDC1-203ENST00000460483 UBE3BQ7Z3V4 1068 aa13.8□□□□□ -0.2
SMNDC1-203ENST00000460483 PANK1Q8TE04 598 aa13.8□□□□□ -0.2
SMNDC1-203ENST00000460483 PHF12Q96QT6 1004 aa13.8□□□□□ -0.2
SMNDC1-203ENST00000460483 TMX4Q9H1E5 349 aaPredicted RBP13.8□□□□□ -0.2
SMNDC1-203ENST00000460483 CD2APQ9Y5K6 639 aa13.8□□□□□ -0.2
SMNDC1-203ENST00000460483 UTYO14607 1347 aa13.8□□□□□ -0.2
SMNDC1-203ENST00000460483 UBN2Q6ZU65 1347 aa13.8□□□□□ -0.2
SMNDC1-203ENST00000460483 MYH14Q7Z406 1995 aaKnown RBP13.8□□□□□ -0.2
SMNDC1-203ENST00000460483 PDE8AO60658 829 aa13.79□□□□□ -0.2
SMNDC1-203ENST00000460483 TGFB2P61812 414 aa13.79□□□□□ -0.2
SMNDC1-203ENST00000460483 CCDC152Q4G0S7 254 aa13.79□□□□□ -0.2
SMNDC1-203ENST00000460483 PRR5LQ6MZQ0 368 aa13.79□□□□□ -0.2
SMNDC1-203ENST00000460483 FAM89AQ96GI7 184 aa13.79□□□□□ -0.2
SMNDC1-203ENST00000460483 COG6Q9Y2V7 657 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms