RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 UPF2Q9HAU5 1272 aaKnown RBP21.38■■□□□ 1.01
CDK11A-209ENST00000460465 EIF5P55010 431 aaKnown RBP21.37■■□□□ 1.01
CDK11A-209ENST00000460465 TSHZ3Q63HK5 1081 aa21.37■■□□□ 1.01
CDK11A-209ENST00000460465 ERC1Q8IUD2 1116 aa21.37■■□□□ 1.01
CDK11A-209ENST00000460465 FOXO4P98177 505 aa21.37■■□□□ 1.01
CDK11A-209ENST00000460465 NUTM1Q86Y26 1132 aa21.37■■□□□ 1.01
CDK11A-209ENST00000460465 TBC1D2BQ9UPU7 963 aa21.37■■□□□ 1.01
CDK11A-209ENST00000460465 CDC45O75419 566 aa21.36■■□□□ 1.01
CDK11A-209ENST00000460465 MFAP1P55081 439 aaKnown RBP21.36■■□□□ 1.01
CDK11A-209ENST00000460465 KLHDC4Q8TBB5 520 aa21.36■■□□□ 1.01
CDK11A-209ENST00000460465 STAP2Q9UGK3 403 aa21.36■■□□□ 1.01
CDK11A-209ENST00000460465 MSH5O43196 834 aa21.35■■□□□ 1.01
CDK11A-209ENST00000460465 SDSP20132 328 aa21.35■■□□□ 1.01
CDK11A-209ENST00000460465 HSP90AB3PQ58FF7 597 aa21.35■■□□□ 1.01
CDK11A-209ENST00000460465 TBC1D9Q6ZT07 1266 aa21.35■■□□□ 1.01
CDK11A-209ENST00000460465 ERVV-1B6SEH8 477 aa21.35■■□□□ 1.01
CDK11A-209ENST00000460465 RFX5P48382 616 aaPredicted RBP21.35■■□□□ 1.01
CDK11A-209ENST00000460465 G3BP1Q13283 466 aaKnown RBP eCLIP21.35■■□□□ 1.01
CDK11A-209ENST00000460465 LMBR1LQ6UX01 489 aa21.35■■□□□ 1.01
CDK11A-209ENST00000460465 SIL1Q9H173 461 aa21.35■■□□□ 1.01
CDK11A-209ENST00000460465 BRWD3Q6RI45 1802 aa21.35■■□□□ 1.01
CDK11A-209ENST00000460465 LY75O60449 1722 aa21.34■■□□□ 1.01
CDK11A-209ENST00000460465 GPTP24298 496 aa21.34■■□□□ 1.01
CDK11A-209ENST00000460465 AOX1Q06278 1338 aa21.33■■□□□ 1.01
CDK11A-209ENST00000460465 LINC00116Q8NCU8 138 aa21.33■■□□□ 1.01
CDK11A-209ENST00000460465 COPRSQ9NQ92 184 aa21.33■■□□□ 1.01
CDK11A-209ENST00000460465 SASH1O94885 1247 aa21.33■■□□□ 1
CDK11A-209ENST00000460465 PCCAP05165 728 aaPredicted RBP21.33■■□□□ 1
CDK11A-209ENST00000460465 NLRP10Q86W26 655 aa21.33■■□□□ 1
CDK11A-209ENST00000460465 TBC1D32Q96NH3 1257 aa21.33■■□□□ 1
CDK11A-209ENST00000460465 BCORQ6W2J9 1755 aa21.33■■□□□ 1
CDK11A-209ENST00000460465 KCNQ4P56696 695 aa21.32■■□□□ 1
CDK11A-209ENST00000460465 PTPN12Q05209 780 aaKnown RBP21.32■■□□□ 1
CDK11A-209ENST00000460465 CLASRPQ8N2M8 674 aaKnown RBP21.32■■□□□ 1
CDK11A-209ENST00000460465 CHMP3Q9Y3E7 222 aa21.32■■□□□ 1
CDK11A-209ENST00000460465 AK9Q5TCS8 1911 aa21.32■■□□□ 1
CDK11A-209ENST00000460465 ZBTB38Q8NAP3 1195 aaPredicted RBP21.32■■□□□ 1
CDK11A-209ENST00000460465 FAM89AQ96GI7 184 aa21.31■■□□□ 1
CDK11A-209ENST00000460465 TAF1LQ8IZX4 1826 aa21.31■■□□□ 1
CDK11A-209ENST00000460465 DDRGK1Q96HY6 314 aa21.3■■□□□ 1
CDK11A-209ENST00000460465 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.3■■□□□ 1
CDK11A-209ENST00000460465 MYH3P11055 1940 aa21.3■■□□□ 1
CDK11A-209ENST00000460465 ZNF34Q8IZ26 560 aa21.29■■□□□ 1
CDK11A-209ENST00000460465 CAMTA2O94983 1202 aa21.28■■□□□ 1
CDK11A-209ENST00000460465 PI4K2BQ8TCG2 481 aa21.28■■□□□ 1
CDK11A-209ENST00000460465 C22orf23Q9BZE7 217 aa21.28■■□□□ 1
CDK11A-209ENST00000460465 UBN2Q6ZU65 1347 aa21.28■■□□□ 1
CDK11A-209ENST00000460465 CDHR2Q9BYE9 1310 aa21.28■■□□□ 1
CDK11A-209ENST00000460465 CNTNAP4Q9C0A0 1308 aa21.28■■□□□ 1
CDK11A-209ENST00000460465 USP42Q9H9J4 1324 aaKnown RBP21.28■■□□□ 1
CDK11A-209ENST00000460465 AACSQ86V21 672 aa21.28■■□□□ 1
CDK11A-209ENST00000460465 IFIT2P09913 472 aaKnown RBP21.27■■□□□ 1
CDK11A-209ENST00000460465 PLA2G12BQ9BX93 195 aa21.27■■□□□ 1
CDK11A-209ENST00000460465 SYNE4Q8N205 404 aa21.27■□□□□ 0.99
CDK11A-209ENST00000460465 CCNL1Q9UK58 526 aaPredicted RBP21.26■□□□□ 0.99
CDK11A-209ENST00000460465 TTC41PQ6P2S7 1318 aa21.26■□□□□ 0.99
CDK11A-209ENST00000460465 TRIM6-TRIM34B2RNG4 842 aa21.26■□□□□ 0.99
CDK11A-209ENST00000460465 CASC1Q6TDU7 716 aa21.26■□□□□ 0.99
CDK11A-209ENST00000460465 EAF2Q96CJ1 260 aaPredicted RBP21.26■□□□□ 0.99
CDK11A-209ENST00000460465 TRMT112Q9UI30 125 aaKnown RBP21.26■□□□□ 0.99
CDK11A-209ENST00000460465 SCN7AQ01118 1682 aa21.25■□□□□ 0.99
CDK11A-209ENST00000460465 RILPL2Q969X0 211 aa21.25■□□□□ 0.99
CDK11A-209ENST00000460465 TFCP2Q12800 502 aa21.24■□□□□ 0.99
CDK11A-209ENST00000460465 GPATCH3Q96I76 525 aa21.24■□□□□ 0.99
CDK11A-209ENST00000460465 CCDC8Q9H0W5 538 aaPredicted RBP21.24■□□□□ 0.99
CDK11A-209ENST00000460465 BCL11BQ9C0K0 894 aaPredicted RBP21.23■□□□□ 0.99
CDK11A-209ENST00000460465 ECHDC1Q9NTX5 307 aa21.23■□□□□ 0.99
CDK11A-209ENST00000460465 CSF1RP07333 972 aa21.23■□□□□ 0.99
CDK11A-209ENST00000460465 RC3H1Q5TC82 1133 aaKnown RBP21.23■□□□□ 0.99
CDK11A-209ENST00000460465 KRT27Q7Z3Y8 459 aa21.23■□□□□ 0.99
CDK11A-209ENST00000460465 ZNF594Q96JF6 807 aaPredicted RBP21.23■□□□□ 0.99
CDK11A-209ENST00000460465 IRS4O14654 1257 aaPredicted RBP21.22■□□□□ 0.99
CDK11A-209ENST00000460465 TLR7Q9NYK1 1049 aaKnown RBP21.22■□□□□ 0.99
CDK11A-209ENST00000460465 C4BP0C0L5 1744 aa21.22■□□□□ 0.99
CDK11A-209ENST00000460465 ERC2O15083 957 aa21.22■□□□□ 0.99
CDK11A-209ENST00000460465 EIF5BO60841 1220 aaKnown RBP21.22■□□□□ 0.99
CDK11A-209ENST00000460465 GLRX3O76003 335 aaKnown RBP21.22■□□□□ 0.99
CDK11A-209ENST00000460465 MAP4K4O95819 1239 aaPredicted RBP21.22■□□□□ 0.99
CDK11A-209ENST00000460465 CCDC57Q2TAC2 916 aa21.22■□□□□ 0.99
CDK11A-209ENST00000460465 SUSD4Q5VX71 490 aa21.22■□□□□ 0.99
CDK11A-209ENST00000460465 ZNF772Q68DY9 489 aaPredicted RBP21.22■□□□□ 0.99
CDK11A-209ENST00000460465 ATG9AQ7Z3C6 839 aa21.22■□□□□ 0.99
CDK11A-209ENST00000460465 CCDC85AQ96PX6 553 aaPredicted RBP21.22■□□□□ 0.99
CDK11A-209ENST00000460465 LAMB2P55268 1798 aa21.22■□□□□ 0.99
CDK11A-209ENST00000460465 DDX60Q8IY21 1712 aaKnown RBP21.22■□□□□ 0.99
CDK11A-209ENST00000460465 RBM25P49756 843 aaKnown RBP21.21■□□□□ 0.99
CDK11A-209ENST00000460465 TNNI3KQ59H18 835 aa21.21■□□□□ 0.99
CDK11A-209ENST00000460465 FAM196AQ6ZSG2 479 aa21.21■□□□□ 0.99
CDK11A-209ENST00000460465 ERICH6Q7L0X2 663 aa21.21■□□□□ 0.99
CDK11A-209ENST00000460465 ZNF652Q9Y2D9 606 aa21.21■□□□□ 0.99
CDK11A-209ENST00000460465 FPGT-TNNI3KV9GXZ4 949 aa21.21■□□□□ 0.99
CDK11A-209ENST00000460465 CTSWP56202 376 aa21.2■□□□□ 0.98
CDK11A-209ENST00000460465 PARP10Q53GL7 1025 aa21.2■□□□□ 0.98
CDK11A-209ENST00000460465 NIP7Q9Y221 180 aaKnown RBP eCLIP21.2■□□□□ 0.98
CDK11A-209ENST00000460465 EYA2O00167 538 aa21.2■□□□□ 0.98
CDK11A-209ENST00000460465 RPS6KA4O75676 772 aa21.2■□□□□ 0.98
CDK11A-209ENST00000460465 LRRC24Q50LG9 513 aa21.2■□□□□ 0.98
CDK11A-209ENST00000460465 SMIM5Q71RC9 77 aa21.2■□□□□ 0.98
CDK11A-209ENST00000460465 FAM177BA6PVY3 158 aa21.19■□□□□ 0.98
CDK11A-209ENST00000460465 GNPATO15228 680 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms