RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 RASSF7Q02833 373 aa18.38■□□□□ 0.53
THBS3-204ENST00000460050 GOLGA2Q08379 1002 aa18.38■□□□□ 0.53
THBS3-204ENST00000460050 SPINK5Q9NQ38 1064 aaPredicted RBP18.38■□□□□ 0.53
THBS3-204ENST00000460050 C21orf2O43822 256 aa18.37■□□□□ 0.53
THBS3-204ENST00000460050 CRY2Q49AN0 593 aa18.37■□□□□ 0.53
THBS3-204ENST00000460050 C9orf131Q5VYM1 1079 aa18.37■□□□□ 0.53
THBS3-204ENST00000460050 RNF123Q5XPI4 1314 aa18.37■□□□□ 0.53
THBS3-204ENST00000460050 TCERG1O14776 1098 aaKnown RBP18.36■□□□□ 0.53
THBS3-204ENST00000460050 RIC3Q7Z5B4 369 aa18.36■□□□□ 0.53
THBS3-204ENST00000460050 ZNF521Q96K83 1311 aa18.36■□□□□ 0.53
THBS3-204ENST00000460050 STK31Q9BXU1 1019 aa18.36■□□□□ 0.53
THBS3-204ENST00000460050 FER1L6Q2WGJ9 1857 aa18.35■□□□□ 0.53
THBS3-204ENST00000460050 ATP5J2-PTCD1G3V325 749 aa18.35■□□□□ 0.53
THBS3-204ENST00000460050 NFKBIEO00221 500 aa18.35■□□□□ 0.53
THBS3-204ENST00000460050 EXOSC9Q06265 439 aaKnown RBP18.35■□□□□ 0.53
THBS3-204ENST00000460050 ZNF428Q96B54 188 aa18.35■□□□□ 0.53
THBS3-204ENST00000460050 ISCA1Q9BUE6 129 aa18.35■□□□□ 0.53
THBS3-204ENST00000460050 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
THBS3-204ENST00000460050 RNF181Q9P0P0 153 aa18.35■□□□□ 0.53
THBS3-204ENST00000460050 TRMT112Q9UI30 125 aaKnown RBP18.35■□□□□ 0.53
THBS3-204ENST00000460050 DIEXFQ68CQ4 756 aaKnown RBP18.34■□□□□ 0.53
THBS3-204ENST00000460050 C3orf67Q6ZVT6 689 aa18.34■□□□□ 0.53
THBS3-204ENST00000460050 ZNF526Q8TF50 670 aaPredicted RBP18.34■□□□□ 0.53
THBS3-204ENST00000460050 RPGRQ92834 1020 aaKnown RBP18.34■□□□□ 0.53
THBS3-204ENST00000460050 CCDC88AQ3V6T2 1871 aa18.34■□□□□ 0.53
THBS3-204ENST00000460050 LAMB2P55268 1798 aa18.33■□□□□ 0.53
THBS3-204ENST00000460050 SH3TC1Q8TE82 1336 aa18.33■□□□□ 0.53
THBS3-204ENST00000460050 DDX58O95786 925 aaKnown RBP18.33■□□□□ 0.52
THBS3-204ENST00000460050 ALDH1B1P30837 517 aa18.33■□□□□ 0.52
THBS3-204ENST00000460050 SLC10A5Q5PT55 438 aa18.33■□□□□ 0.52
THBS3-204ENST00000460050 SYNE4Q8N205 404 aa18.33■□□□□ 0.52
THBS3-204ENST00000460050 NLRP3Q96P20 1036 aa18.33■□□□□ 0.52
THBS3-204ENST00000460050 CACNA1FO60840 1977 aa18.32■□□□□ 0.52
THBS3-204ENST00000460050 VAMP4O75379 141 aa18.32■□□□□ 0.52
THBS3-204ENST00000460050 HCLS1P14317 486 aaPredicted RBP18.32■□□□□ 0.52
THBS3-204ENST00000460050 LMNB1P20700 586 aa18.32■□□□□ 0.52
THBS3-204ENST00000460050 PRELPP51888 382 aa18.32■□□□□ 0.52
THBS3-204ENST00000460050 SOGA3Q5TF21 947 aa18.32■□□□□ 0.52
THBS3-204ENST00000460050 C7orf43Q8WVR3 580 aa18.32■□□□□ 0.52
THBS3-204ENST00000460050 GPBP1L1Q9HC44 474 aaPredicted RBP18.32■□□□□ 0.52
THBS3-204ENST00000460050 SLC4A2P04920 1241 aa18.31■□□□□ 0.52
THBS3-204ENST00000460050 HOXA10P31260 410 aaPredicted RBP18.31■□□□□ 0.52
THBS3-204ENST00000460050 TRIM28Q13263 835 aaKnown RBP18.31■□□□□ 0.52
THBS3-204ENST00000460050 CCDC93Q567U6 631 aa18.31■□□□□ 0.52
THBS3-204ENST00000460050 G2E3Q7L622 706 aa18.31■□□□□ 0.52
THBS3-204ENST00000460050 MYD88Q99836 296 aa18.31■□□□□ 0.52
THBS3-204ENST00000460050 LTBP3Q9NS15 1303 aa18.3■□□□□ 0.52
THBS3-204ENST00000460050 DDX60Q8IY21 1712 aaKnown RBP18.3■□□□□ 0.52
THBS3-204ENST00000460050 TAOK3Q9H2K8 898 aa18.3■□□□□ 0.52
THBS3-204ENST00000460050 MAP3K2Q9Y2U5 619 aa18.3■□□□□ 0.52
THBS3-204ENST00000460050 TIAM2Q8IVF5 1701 aa18.29■□□□□ 0.52
THBS3-204ENST00000460050 PI4KAP2A4QPH2 592 aa18.29■□□□□ 0.52
THBS3-204ENST00000460050 OLFM4Q6UX06 510 aa18.29■□□□□ 0.52
THBS3-204ENST00000460050 KSR2Q6VAB6 950 aa18.29■□□□□ 0.52
THBS3-204ENST00000460050 MIER1Q8N108 512 aa18.29■□□□□ 0.52
THBS3-204ENST00000460050 PI4KAP1Q8N8J0 262 aa18.29■□□□□ 0.52
THBS3-204ENST00000460050 FAM89AQ96GI7 184 aa18.29■□□□□ 0.52
THBS3-204ENST00000460050 RBM17Q96I25 401 aaKnown RBP18.29■□□□□ 0.52
THBS3-204ENST00000460050 CRAMP1Q96RY5 1269 aa18.29■□□□□ 0.52
THBS3-204ENST00000460050 METTL22Q9BUU2 404 aaPredicted RBP18.29■□□□□ 0.52
THBS3-204ENST00000460050 DICER1Q9UPY3 1922 aaKnown RBP18.28■□□□□ 0.52
THBS3-204ENST00000460050 RTL5Q5HYW3 569 aaPredicted RBP18.28■□□□□ 0.52
THBS3-204ENST00000460050 ZC3H4Q9UPT8 1303 aaKnown RBP18.27■□□□□ 0.52
THBS3-204ENST00000460050 FLIIQ13045 1269 aa18.27■□□□□ 0.52
THBS3-204ENST00000460050 CCDC191Q8NCU4 936 aa18.27■□□□□ 0.52
THBS3-204ENST00000460050 E9PSI1 815 aa18.26■□□□□ 0.51
THBS3-204ENST00000460050 PPEF1O14829 653 aaPredicted RBP18.26■□□□□ 0.51
THBS3-204ENST00000460050 CWC25Q9NXE8 425 aaPredicted RBP18.26■□□□□ 0.51
THBS3-204ENST00000460050 ABCC4O15439 1325 aa18.25■□□□□ 0.51
THBS3-204ENST00000460050 SNED1Q8TER0 1413 aa18.25■□□□□ 0.51
THBS3-204ENST00000460050 IRS4O14654 1257 aaPredicted RBP18.25■□□□□ 0.51
THBS3-204ENST00000460050 FKBP4Q02790 459 aaKnown RBP eCLIP18.25■□□□□ 0.51
THBS3-204ENST00000460050 FKBP5Q13451 457 aaPredicted RBP18.25■□□□□ 0.51
THBS3-204ENST00000460050 RTKN2Q8IZC4 609 aa18.25■□□□□ 0.51
THBS3-204ENST00000460050 ZBTB38Q8NAP3 1195 aaPredicted RBP18.25■□□□□ 0.51
THBS3-204ENST00000460050 TAF1P21675 1872 aa18.24■□□□□ 0.51
THBS3-204ENST00000460050 PCCAP05165 728 aaPredicted RBP18.24■□□□□ 0.51
THBS3-204ENST00000460050 IGKV5-2P06315 115 aa18.24■□□□□ 0.51
THBS3-204ENST00000460050 NEXNQ0ZGT2 675 aa18.24■□□□□ 0.51
THBS3-204ENST00000460050 CC2D2BQ6DHV5 1058 aa18.24■□□□□ 0.51
THBS3-204ENST00000460050 DDX46Q7L014 1031 aaKnown RBP18.24■□□□□ 0.51
THBS3-204ENST00000460050 SLC51AQ86UW1 340 aa18.24■□□□□ 0.51
THBS3-204ENST00000460050 SLFN5Q08AF3 891 aa18.23■□□□□ 0.51
THBS3-204ENST00000460050 KDM2BQ8NHM5 1336 aa18.23■□□□□ 0.51
THBS3-204ENST00000460050 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
THBS3-204ENST00000460050 CWF19L2Q2TBE0 894 aaKnown RBP18.22■□□□□ 0.51
THBS3-204ENST00000460050 DNAAF4Q8WXU2 420 aa18.22■□□□□ 0.51
THBS3-204ENST00000460050 JARID2Q92833 1246 aaPredicted RBP18.22■□□□□ 0.51
THBS3-204ENST00000460050 CDCA7LQ96GN5 454 aa18.22■□□□□ 0.51
THBS3-204ENST00000460050 NMRK2Q9NPI5 230 aa18.22■□□□□ 0.51
THBS3-204ENST00000460050 ZNF277Q9NRM2 450 aaPredicted RBP18.22■□□□□ 0.51
THBS3-204ENST00000460050 NEURL1BA8MQ27 555 aa18.21■□□□□ 0.51
THBS3-204ENST00000460050 KIF3CO14782 793 aa18.21■□□□□ 0.51
THBS3-204ENST00000460050 C1QTNF8P60827 252 aa18.21■□□□□ 0.51
THBS3-204ENST00000460050 GRAPQ13588 217 aa18.21■□□□□ 0.51
THBS3-204ENST00000460050 GRAPLQ8TC17 118 aaPredicted RBP18.21■□□□□ 0.51
THBS3-204ENST00000460050 ATP6V0A2Q9Y487 856 aa18.21■□□□□ 0.51
THBS3-204ENST00000460050 BBOX1O75936 387 aa18.2■□□□□ 0.5
THBS3-204ENST00000460050 HSP90B1P14625 803 aaKnown RBP18.2■□□□□ 0.5
THBS3-204ENST00000460050 GRIPAP1Q4V328 841 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms