RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 CCDC125Q86Z20 511 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 CLASRPQ8N2M8 674 aaKnown RBP7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 NBPF15Q8N660 670 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 ZBTB38Q8NAP3 1195 aaPredicted RBP7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 UTP14AQ9BVJ6 771 aaKnown RBP7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 TMX4Q9H1E5 349 aaPredicted RBP7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 TFCP2L1Q9NZI6 479 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 NIP7Q9Y221 180 aaKnown RBP eCLIP7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 ZBTB1Q9Y2K1 713 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 MYH3P11055 1940 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 ANKRD36CQ5JPF3 1778 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 COL15A1P39059 1388 aa7.2□□□□□ -1.26
RNU1-88P-201ENST00000459274 PCCAP05165 728 aaPredicted RBP7.19□□□□□ -1.26
RNU1-88P-201ENST00000459274 IFIT2P09913 472 aaKnown RBP7.19□□□□□ -1.26
RNU1-88P-201ENST00000459274 NBPF7P0C2Y1 421 aaPredicted RBP7.19□□□□□ -1.26
RNU1-88P-201ENST00000459274 EIF5P55010 431 aaKnown RBP7.19□□□□□ -1.26
RNU1-88P-201ENST00000459274 TRIM28Q13263 835 aaKnown RBP7.19□□□□□ -1.26
RNU1-88P-201ENST00000459274 IFIT5Q13325 482 aaKnown RBP7.19□□□□□ -1.26
RNU1-88P-201ENST00000459274 TTLL7Q6ZT98 887 aa7.19□□□□□ -1.26
RNU1-88P-201ENST00000459274 SMC5Q8IY18 1101 aa7.19□□□□□ -1.26
RNU1-88P-201ENST00000459274 KIF1BPQ96EK5 621 aa7.19□□□□□ -1.26
RNU1-88P-201ENST00000459274 DCTPP1Q9H773 170 aa7.19□□□□□ -1.26
RNU1-88P-201ENST00000459274 PDZRN3Q9UPQ7 1066 aa7.19□□□□□ -1.26
RNU1-88P-201ENST00000459274 TAF1LQ8IZX4 1826 aa7.19□□□□□ -1.26
RNU1-88P-201ENST00000459274 IBTKQ9P2D0 1353 aaPredicted RBP7.19□□□□□ -1.26
RNU1-88P-201ENST00000459274 LY75O60449 1722 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 TJP1Q07157 1748 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 ANKRD18BA2A2Z9 1011 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 ERC2O15083 957 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 PDE8AO60658 829 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 GABBR2O75899 941 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 PHF14O94880 888 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 GPTP24298 496 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 SSFA2P28290 1259 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 NUCB1Q02818 461 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 TXNRD1Q16881 649 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 RTL5Q5HYW3 569 aaPredicted RBP7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 GORABQ5T7V8 394 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 INTS5Q6P9B9 1019 aaKnown RBP7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 BICDL1Q6ZP65 573 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 NBPF5PQ86XG9 351 aaPredicted RBP7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 STK32BQ9NY57 414 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 DAXXQ9UER7 740 aaPredicted RBP7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 NARFQ9UHQ1 456 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 AKAP2Q9Y2D5 859 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 UTYO14607 1347 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 SH3TC1Q8TE82 1336 aa7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 COL5A3P25940 1745 aaPredicted RBP7.18□□□□□ -1.26
RNU1-88P-201ENST00000459274 CICQ96RK0 1608 aaPredicted RBP7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 FAM177BA6PVY3 158 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 H7C1W4 665 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 ST5P78524 1137 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 ITPK1Q13572 414 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 CCDC152Q4G0S7 254 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 LMBR1LQ6UX01 489 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 NLGN1Q8N2Q7 840 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 SSH3Q8TE77 659 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 NLRP3Q96P20 1036 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 MPHOSPH8Q99549 860 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 LNPKQ9C0E8 428 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 BICC1Q9H694 974 aaKnown RBP7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 FBXO3Q9UK99 471 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 NUP188Q5SRE5 1749 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 KDM2BQ8NHM5 1336 aa7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 MYH14Q7Z406 1995 aaKnown RBP7.17□□□□□ -1.26
RNU1-88P-201ENST00000459274 IRS4O14654 1257 aaPredicted RBP7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 IGKV5-2P06315 115 aa7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 IGHMBP2P38935 993 aaKnown RBP7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 MTX1Q13505 466 aa7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 LRRFIP1Q32MZ4 808 aaKnown RBP7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 USPL1Q5W0Q7 1092 aa7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 NLRP10Q86W26 655 aa7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 LINC00116Q8NCU8 138 aa7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 FAM89AQ96GI7 184 aa7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 CDC5LQ99459 802 aaKnown RBP7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 ISCA1Q9BUE6 129 aa7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 CNNM1Q9NRU3 951 aa7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 CEP126Q9P2H0 1117 aa7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 EXOC6BQ9Y2D4 811 aa7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 AK9Q5TCS8 1911 aa7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 CDHR2Q9BYE9 1310 aa7.16□□□□□ -1.26
RNU1-88P-201ENST00000459274 C4BP0C0L5 1744 aa7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 TRIM6-TRIM34B2RNG4 842 aa7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 IL15P40933 162 aaPredicted RBP7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 KCNQ4P56696 695 aa7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 HLFQ16534 295 aa7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 FAM161AQ3B820 660 aa7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 POTEAQ6S8J7 498 aa7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 ZNF34Q8IZ26 560 aa7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 RHPN1Q8TCX5 695 aa7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 ARHGEF1Q92888 912 aaKnown RBP7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 SUCLG2Q96I99 432 aa7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 SLC4A9Q96Q91 983 aa7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 SIL1Q9H173 461 aa7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 PARP3Q9Y6F1 533 aa7.15□□□□□ -1.26
RNU1-88P-201ENST00000459274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.14□□□□□ -1.27
RNU1-88P-201ENST00000459274 PNMA6EA0A0J9YXQ4 647 aa7.14□□□□□ -1.27
RNU1-88P-201ENST00000459274 CAMTA2O94983 1202 aa7.14□□□□□ -1.27
RNU1-88P-201ENST00000459274 MX1P20591 662 aa7.14□□□□□ -1.27
RNU1-88P-201ENST00000459274 ANP32AP39687 249 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms