RNA–Protein interactions for RNA: ENST00000458625.5

CCL25-204, Transcript of C-C motif chemokine ligand 25, humanhuman

TSL 5

Gene CCL25, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL25-204ENST00000458625 SOX10P56693 466 aa16.17■□□□□ 0.18
CCL25-204ENST00000458625 HLFQ16534 295 aa16.17■□□□□ 0.18
CCL25-204ENST00000458625 CRY2Q49AN0 593 aa16.17■□□□□ 0.18
CCL25-204ENST00000458625 NBPF10Q6P3W6 841 aaKnown RBP16.17■□□□□ 0.18
CCL25-204ENST00000458625 NBPF15Q8N660 670 aa16.17■□□□□ 0.18
CCL25-204ENST00000458625 GLIS2Q9BZE0 524 aaPredicted RBP16.17■□□□□ 0.18
CCL25-204ENST00000458625 GNAT3A8MTJ3 354 aa16.16■□□□□ 0.18
CCL25-204ENST00000458625 HHIPL1Q96JK4 782 aa16.16■□□□□ 0.18
CCL25-204ENST00000458625 DIAPH1O60610 1272 aaKnown RBP16.15■□□□□ 0.18
CCL25-204ENST00000458625 LARGE2Q8N3Y3 721 aa16.15■□□□□ 0.18
CCL25-204ENST00000458625 GPRC5DQ9NZD1 345 aa16.15■□□□□ 0.18
CCL25-204ENST00000458625 ZNF652Q9Y2D9 606 aa16.15■□□□□ 0.18
CCL25-204ENST00000458625 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
CCL25-204ENST00000458625 NUTM1Q86Y26 1132 aa16.14■□□□□ 0.17
CCL25-204ENST00000458625 ADARB2Q9NS39 739 aaKnown RBP16.14■□□□□ 0.17
CCL25-204ENST00000458625 PGAP2Q9UHJ9 254 aa16.14■□□□□ 0.17
CCL25-204ENST00000458625 KNSTRNQ9Y448 316 aa16.14■□□□□ 0.17
CCL25-204ENST00000458625 COL3A1P02461 1466 aaPredicted RBP16.14■□□□□ 0.17
CCL25-204ENST00000458625 BTBD11A6QL63 1104 aa16.13■□□□□ 0.17
CCL25-204ENST00000458625 HIRAP54198 1017 aaPredicted RBP16.13■□□□□ 0.17
CCL25-204ENST00000458625 DLK2Q6UY11 383 aa16.13■□□□□ 0.17
CCL25-204ENST00000458625 CC2D2BQ6DHV5 1058 aa16.12■□□□□ 0.17
CCL25-204ENST00000458625 ZNF408Q9H9D4 720 aa16.12■□□□□ 0.17
CCL25-204ENST00000458625 TCERG1O14776 1098 aaKnown RBP16.11■□□□□ 0.17
CCL25-204ENST00000458625 RGL2O15211 777 aa16.11■□□□□ 0.17
CCL25-204ENST00000458625 HOXA10P31260 410 aaPredicted RBP16.11■□□□□ 0.17
CCL25-204ENST00000458625 GMPSP49915 693 aaPredicted RBP16.11■□□□□ 0.17
CCL25-204ENST00000458625 CXCL9Q07325 125 aa16.11■□□□□ 0.17
CCL25-204ENST00000458625 AOC3Q16853 763 aa16.11■□□□□ 0.17
CCL25-204ENST00000458625 PRPF38BQ5VTL8 546 aaKnown RBP16.11■□□□□ 0.17
CCL25-204ENST00000458625 C3orf67Q6ZVT6 689 aa16.11■□□□□ 0.17
CCL25-204ENST00000458625 NIM1KQ8IY84 436 aa16.11■□□□□ 0.17
CCL25-204ENST00000458625 GAS2L2Q8NHY3 880 aa16.11■□□□□ 0.17
CCL25-204ENST00000458625 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
CCL25-204ENST00000458625 RIC1Q4ADV7 1423 aa16.11■□□□□ 0.17
CCL25-204ENST00000458625 SHTN1A0MZ66 631 aa16.1■□□□□ 0.17
CCL25-204ENST00000458625 SNRPA1P09661 255 aaKnown RBP16.1■□□□□ 0.17
CCL25-204ENST00000458625 TRPM4Q8TD43 1214 aa16.1■□□□□ 0.17
CCL25-204ENST00000458625 PHACTR3Q96KR7 559 aa16.1■□□□□ 0.17
CCL25-204ENST00000458625 FAM155AB1AL88 458 aaPredicted RBP16.09■□□□□ 0.17
CCL25-204ENST00000458625 PPIP5K2O43314 1243 aa16.09■□□□□ 0.17
CCL25-204ENST00000458625 GTF2E1P29083 439 aaPredicted RBP16.09■□□□□ 0.17
CCL25-204ENST00000458625 NUP98P52948 1817 aa16.08■□□□□ 0.17
CCL25-204ENST00000458625 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.16
CCL25-204ENST00000458625 NOGQ13253 232 aa16.08■□□□□ 0.16
CCL25-204ENST00000458625 KIF7Q2M1P5 1343 aa16.08■□□□□ 0.16
CCL25-204ENST00000458625 U2SURPO15042 1029 aaKnown RBP16.07■□□□□ 0.16
CCL25-204ENST00000458625 HUNKP57058 714 aa16.07■□□□□ 0.16
CCL25-204ENST00000458625 RPGRQ92834 1020 aaKnown RBP16.07■□□□□ 0.16
CCL25-204ENST00000458625 UBN2Q6ZU65 1347 aa16.07■□□□□ 0.16
CCL25-204ENST00000458625 EIF4G2P78344 907 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCL25-204ENST00000458625 GRIPAP1Q4V328 841 aa16.06■□□□□ 0.16
CCL25-204ENST00000458625 USP48Q86UV5 1035 aa16.06■□□□□ 0.16
CCL25-204ENST00000458625 CRAMP1Q96RY5 1269 aa16.06■□□□□ 0.16
CCL25-204ENST00000458625 ZNRF3Q9ULT6 936 aa16.06■□□□□ 0.16
CCL25-204ENST00000458625 SUSD4Q5VX71 490 aa16.05■□□□□ 0.16
CCL25-204ENST00000458625 CDC37L1Q7L3B6 337 aa16.05■□□□□ 0.16
CCL25-204ENST00000458625 ZC3H15Q8WU90 426 aaKnown RBP16.05■□□□□ 0.16
CCL25-204ENST00000458625 NYXQ9GZU5 481 aa16.05■□□□□ 0.16
CCL25-204ENST00000458625 RNF186Q9NXI6 227 aa16.05■□□□□ 0.16
CCL25-204ENST00000458625 TRPA1O75762 1119 aa16.04■□□□□ 0.16
CCL25-204ENST00000458625 RAD17O75943 681 aa16.04■□□□□ 0.16
CCL25-204ENST00000458625 GPTP24298 496 aa16.04■□□□□ 0.16
CCL25-204ENST00000458625 KIF23Q02241 960 aaPredicted RBP16.04■□□□□ 0.16
CCL25-204ENST00000458625 CC2D1BQ5T0F9 858 aaKnown RBP16.04■□□□□ 0.16
CCL25-204ENST00000458625 TTLL7Q6ZT98 887 aa16.04■□□□□ 0.16
CCL25-204ENST00000458625 MCM10Q7L590 875 aa16.04■□□□□ 0.16
CCL25-204ENST00000458625 RBM17Q96I25 401 aaKnown RBP16.04■□□□□ 0.16
CCL25-204ENST00000458625 SAGE1Q9NXZ1 904 aa16.04■□□□□ 0.16
CCL25-204ENST00000458625 PER1O15534 1290 aaPredicted RBP16.03■□□□□ 0.16
CCL25-204ENST00000458625 RGMBQ6NW40 437 aa16.03■□□□□ 0.16
CCL25-204ENST00000458625 NGEFQ8N5V2 710 aa16.03■□□□□ 0.16
CCL25-204ENST00000458625 RTFDC1Q9BY42 306 aaPredicted RBP16.03■□□□□ 0.16
CCL25-204ENST00000458625 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
CCL25-204ENST00000458625 ATP6V0A2Q9Y487 856 aa16.03■□□□□ 0.16
CCL25-204ENST00000458625 LAMB4A4D0S4 1761 aa16.03■□□□□ 0.16
CCL25-204ENST00000458625 POLR2AP24928 1970 aaKnown RBP16.02■□□□□ 0.16
CCL25-204ENST00000458625 MAP3K15Q6ZN16 1313 aa16.02■□□□□ 0.16
CCL25-204ENST00000458625 YDJCA8MPS7 323 aa16.02■□□□□ 0.16
CCL25-204ENST00000458625 ERVV-1B6SEH8 477 aa16.02■□□□□ 0.16
CCL25-204ENST00000458625 NTSR2O95665 410 aa16.02■□□□□ 0.16
CCL25-204ENST00000458625 EGFRP00533 1210 aa16.02■□□□□ 0.16
CCL25-204ENST00000458625 PRKAR2BP31323 418 aa16.02■□□□□ 0.16
CCL25-204ENST00000458625 DCTN1Q14203 1278 aa16.02■□□□□ 0.16
CCL25-204ENST00000458625 RSPH6AQ9H0K4 717 aa16.02■□□□□ 0.16
CCL25-204ENST00000458625 VPS33BQ9H267 617 aa16.02■□□□□ 0.16
CCL25-204ENST00000458625 CNOT7Q9UIV1 285 aaKnown RBP16.02■□□□□ 0.16
CCL25-204ENST00000458625 IBTKQ9P2D0 1353 aaPredicted RBP16.01■□□□□ 0.15
CCL25-204ENST00000458625 CDHR2Q9BYE9 1310 aa16.01■□□□□ 0.15
CCL25-204ENST00000458625 CTU1Q7Z7A3 348 aaKnown RBP16.01■□□□□ 0.15
CCL25-204ENST00000458625 BCL2L13Q9BXK5 485 aa16.01■□□□□ 0.15
CCL25-204ENST00000458625 AKAP11Q9UKA4 1901 aa16.01■□□□□ 0.15
CCL25-204ENST00000458625 MKI67P46013 3256 aaKnown RBP16■□□□□ 0.15
CCL25-204ENST00000458625 SAMD7Q7Z3H4 446 aa16■□□□□ 0.15
CCL25-204ENST00000458625 MICALL2Q8IY33 904 aa16■□□□□ 0.15
CCL25-204ENST00000458625 ZNF34Q8IZ26 560 aa16■□□□□ 0.15
CCL25-204ENST00000458625 CSRNP1Q96S65 589 aa16■□□□□ 0.15
CCL25-204ENST00000458625 MIS18AQ9NYP9 233 aa16■□□□□ 0.15
CCL25-204ENST00000458625 HPS5Q9UPZ3 1129 aa16■□□□□ 0.15
CCL25-204ENST00000458625 ABCC4O15439 1325 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms