RNA–Protein interactions for RNA: ENST00000458301.5

AFG3L1P-216, Transcript of AFG3 like matrix AAA peptidase subunit 1, pseudogene, human

TSL 2

Gene AFG3L1P, Length 2,298 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFG3L1P-216	ENST00000458301	BMP2KL	Q5H9B9	411 aa		13.81	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	NLRP10	Q86W26	655 aa		13.81	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	AMIGO3	Q86WK7	504 aa		13.81	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	SASH1	O94885	1247 aa		13.81	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	PDE1A	P54750	535 aa		13.81	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	TRIM28	Q13263	835 aa	Known RBP	13.81	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	TTC22	Q5TAA0	569 aa		13.81	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	HDAC5	Q9UQL6	1122 aa		13.81	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	ANKRD36C	Q5JPF3	1778 aa		13.81	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	UBN2	Q6ZU65	1347 aa		13.81	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	RAB11FIP3	O75154	756 aa		13.8	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	CAMTA2	O94983	1202 aa		13.8	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	KRT27	Q7Z3Y8	459 aa		13.8	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	PTPN12	Q05209	780 aa	Known RBP	13.8	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	OS9	Q13438	667 aa	Predicted RBP	13.8	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.8	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	ZNF831	Q5JPB2	1677 aa		13.8	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	ERVV-1	B6SEH8	477 aa		13.79	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	KIF1BP	Q96EK5	621 aa		13.79	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	CCNL1	Q9UK58	526 aa	Predicted RBP	13.79	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	CHMP3	Q9Y3E7	222 aa		13.79	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	TAF1L	Q8IZX4	1826 aa		13.79	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	LY75	O60449	1722 aa		13.79	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	COL15A1	P39059	1388 aa		13.79	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	FAM177B	A6PVY3	158 aa		13.79	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	TRIM37	O94972	964 aa		13.79	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	ZNF34	Q8IZ26	560 aa		13.79	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	LRRC4B	Q9NT99	713 aa		13.79	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	RGS17	Q9UGC6	210 aa	Predicted RBP	13.79	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	PCCA	P05165	728 aa	Predicted RBP	13.78	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	SDS	P20132	328 aa		13.78	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	RBM6	P78332	1123 aa	Known RBP	13.78	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	ZNF594	Q96JF6	807 aa	Predicted RBP	13.78	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.78	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	MX1	P20591	662 aa		13.78	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.78	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	OSBPL3	Q9H4L5	887 aa		13.78	□□□□□ -0.2
AFG3L1P-216	ENST00000458301	TUBGCP6	Q96RT7	1819 aa		13.77	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	SUSD4	Q5VX71	490 aa		13.77	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	ZNF772	Q68DY9	489 aa	Predicted RBP	13.77	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	TBC1D9	Q6ZT07	1266 aa		13.76	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	COPRS	Q9NQ92	184 aa		13.76	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	TRMT112	Q9UI30	125 aa	Known RBP	13.76	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	HSP90AB4P	Q58FF6	505 aa		13.76	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	HSP90AB3P	Q58FF7	597 aa		13.76	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	FAM196A	Q6ZSG2	479 aa		13.76	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	EAF2	Q96CJ1	260 aa	Predicted RBP	13.76	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	STAP2	Q9UGK3	403 aa		13.76	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	SRP68	Q9UHB9	627 aa	Known RBP	13.76	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	CNTNAP4	Q9C0A0	1308 aa		13.76	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	GNPAT	O15228	680 aa		13.75	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	MSH5	O43196	834 aa		13.75	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	MFAP1	P55081	439 aa	Known RBP	13.75	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.75	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	TLR7	Q9NYK1	1049 aa	Known RBP	13.75	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	MAP4K4	O95819	1239 aa	Predicted RBP	13.75	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	PUS3	Q9BZE2	481 aa	Known RBP	13.75	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	BCL2L12	Q9HB09	334 aa		13.75	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	TFCP2	Q12800	502 aa		13.74	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	LRRC24	Q50LG9	513 aa		13.74	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	POTEA	Q6S8J7	498 aa		13.74	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	PI4K2B	Q8TCG2	481 aa		13.74	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	MYH3	P11055	1940 aa		13.74	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	IRS4	O14654	1257 aa	Predicted RBP	13.74	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	RPS6KA4	O75676	772 aa		13.74	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	RC3H1	Q5TC82	1133 aa	Known RBP	13.74	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	ATG9A	Q7Z3C6	839 aa		13.74	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	AACS	Q86V21	672 aa		13.74	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	BCOR	Q6W2J9	1755 aa		13.74	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	CSF1R	P07333	972 aa		13.73	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	HCLS1	P14317	486 aa	Predicted RBP	13.73	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	PROM2	Q8N271	834 aa		13.73	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	CLASRP	Q8N2M8	674 aa	Known RBP	13.73	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	PLA2G12B	Q9BX93	195 aa		13.73	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	RXRB	P28702	533 aa		13.73	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	USPL1	Q5W0Q7	1092 aa		13.73	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	BICDL1	Q6ZP65	573 aa		13.73	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	ERC1	Q8IUD2	1116 aa		13.73	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	TTLL11	Q8NHH1	800 aa		13.73	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	ARHGEF1	Q92888	912 aa	Known RBP	13.73	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	C4B	P0C0L5	1744 aa		13.72	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	PHF14	O94880	888 aa		13.72	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	ANP32A	P39687	249 aa	Known RBP	13.72	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	CDHR2	Q9BYE9	1310 aa		13.72	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	GREM2	Q9H772	168 aa		13.72	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	CDC45	O75419	566 aa		13.71	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	TBC1D9B	Q66K14	1250 aa		13.71	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	RILPL2	Q969X0	211 aa		13.71	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	NTSR2	O95665	410 aa		13.71	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	IFIT2	P09913	472 aa	Known RBP	13.71	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	RTCB	Q9Y3I0	505 aa	Known RBP	13.71	□□□□□ -0.21
AFG3L1P-216	ENST00000458301	TRIM6-TRIM34	B2RNG4	842 aa		13.7	□□□□□ -0.22
AFG3L1P-216	ENST00000458301	CTSW	P56202	376 aa		13.7	□□□□□ -0.22
AFG3L1P-216	ENST00000458301	FBXO41	Q8TF61	875 aa		13.7	□□□□□ -0.22
AFG3L1P-216	ENST00000458301	TBC1D32	Q96NH3	1257 aa		13.7	□□□□□ -0.22
AFG3L1P-216	ENST00000458301	UTP14A	Q9BVJ6	771 aa	Known RBP	13.7	□□□□□ -0.22
AFG3L1P-216	ENST00000458301	AK9	Q5TCS8	1911 aa		13.7	□□□□□ -0.22
AFG3L1P-216	ENST00000458301	DDX60	Q8IY21	1712 aa	Known RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms