RNA–Protein interactions for RNA: ENST00000457478.1

LINC01250-201, Transcript of long intergenic non-protein coding RNA 1250, humanhuman

TSL 2 BASIC

Gene LINC01250, Length 2,344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01250-201ENST00000457478 CLSTN1O94985 981 aa17.23■□□□□ 0.35
LINC01250-201ENST00000457478 ERCC6LQ2NKX8 1250 aa17.23■□□□□ 0.35
LINC01250-201ENST00000457478 ADGRB1O14514 1584 aa17.23■□□□□ 0.35
LINC01250-201ENST00000457478 LEKR1Q6ZMV7 388 aa17.22■□□□□ 0.35
LINC01250-201ENST00000457478 TBC1D22AQ8WUA7 517 aa17.22■□□□□ 0.35
LINC01250-201ENST00000457478 TMX3Q96JJ7 454 aa17.22■□□□□ 0.35
LINC01250-201ENST00000457478 TRAK1Q9UPV9 953 aa17.22■□□□□ 0.35
LINC01250-201ENST00000457478 WDR33Q9C0J8 1336 aaKnown RBP17.22■□□□□ 0.35
LINC01250-201ENST00000457478 MST1RQ04912 1400 aa17.22■□□□□ 0.35
LINC01250-201ENST00000457478 CCDC192P0DO97 292 aa17.22■□□□□ 0.35
LINC01250-201ENST00000457478 PLA2G4DQ86XP0 818 aa17.22■□□□□ 0.35
LINC01250-201ENST00000457478 SSR1P43307 286 aaKnown RBP17.21■□□□□ 0.35
LINC01250-201ENST00000457478 SAFB2Q14151 953 aaKnown RBP eCLIP17.21■□□□□ 0.35
LINC01250-201ENST00000457478 ANKRD45Q5TZF3 282 aa17.21■□□□□ 0.35
LINC01250-201ENST00000457478 PRAM1Q96QH2 718 aa17.21■□□□□ 0.35
LINC01250-201ENST00000457478 GDPD2Q9HCC8 539 aa17.21■□□□□ 0.35
LINC01250-201ENST00000457478 MAP9Q49MG5 647 aa17.21■□□□□ 0.35
LINC01250-201ENST00000457478 INTS3Q68E01 1043 aaKnown RBP17.21■□□□□ 0.35
LINC01250-201ENST00000457478 CACTINQ8WUQ7 758 aaKnown RBP17.21■□□□□ 0.35
LINC01250-201ENST00000457478 RUNDC1Q96C34 613 aa17.21■□□□□ 0.35
LINC01250-201ENST00000457478 KLHL33A6NCF5 533 aa17.2■□□□□ 0.34
LINC01250-201ENST00000457478 CDC25BP30305 580 aa17.2■□□□□ 0.34
LINC01250-201ENST00000457478 ZKSCAN8Q15776 578 aaPredicted RBP17.2■□□□□ 0.34
LINC01250-201ENST00000457478 BRINP3Q76B58 766 aa17.2■□□□□ 0.34
LINC01250-201ENST00000457478 EFCAB13Q8IY85 973 aa17.2■□□□□ 0.34
LINC01250-201ENST00000457478 ZNF75DP51815 510 aa17.2■□□□□ 0.34
LINC01250-201ENST00000457478 ARHGAP29Q52LW3 1261 aa17.2■□□□□ 0.34
LINC01250-201ENST00000457478 FAM212AQ96EL1 285 aa17.2■□□□□ 0.34
LINC01250-201ENST00000457478 SMC1AQ14683 1233 aaKnown RBP17.19■□□□□ 0.34
LINC01250-201ENST00000457478 DRC7Q8IY82 874 aa17.19■□□□□ 0.34
LINC01250-201ENST00000457478 MKRN1Q9UHC7 482 aaKnown RBP17.19■□□□□ 0.34
LINC01250-201ENST00000457478 PPIP5K1Q6PFW1 1433 aa17.19■□□□□ 0.34
LINC01250-201ENST00000457478 GSPT1P15170 499 aaKnown RBP17.19■□□□□ 0.34
LINC01250-201ENST00000457478 LMAN1P49257 510 aa17.19■□□□□ 0.34
LINC01250-201ENST00000457478 PPP2R5AQ15172 486 aa17.19■□□□□ 0.34
LINC01250-201ENST00000457478 ZRSR1Q15695 479 aaKnown RBP17.19■□□□□ 0.34
LINC01250-201ENST00000457478 CCDC93Q567U6 631 aa17.19■□□□□ 0.34
LINC01250-201ENST00000457478 GIMAP6Q6P9H5 292 aa17.19■□□□□ 0.34
LINC01250-201ENST00000457478 TMEM57Q8N5G2 664 aa17.19■□□□□ 0.34
LINC01250-201ENST00000457478 NRBP1Q9UHY1 535 aa17.19■□□□□ 0.34
LINC01250-201ENST00000457478 ADAM21Q9UKJ8 722 aa17.19■□□□□ 0.34
LINC01250-201ENST00000457478 TTC36A6NLP5 189 aa17.18■□□□□ 0.34
LINC01250-201ENST00000457478 C21orf2O43822 256 aa17.18■□□□□ 0.34
LINC01250-201ENST00000457478 ORC3Q9UBD5 711 aaPredicted RBP17.18■□□□□ 0.34
LINC01250-201ENST00000457478 C1orf167Q5SNV9 1468 aa17.17■□□□□ 0.34
LINC01250-201ENST00000457478 DLC1Q96QB1 1528 aa17.17■□□□□ 0.34
LINC01250-201ENST00000457478 NUTM2FA1L443 756 aa17.17■□□□□ 0.34
LINC01250-201ENST00000457478 USP27XA6NNY8 438 aa17.17■□□□□ 0.34
LINC01250-201ENST00000457478 CASTP20810 708 aaKnown RBP17.17■□□□□ 0.34
LINC01250-201ENST00000457478 PHLPP1O60346 1717 aa17.17■□□□□ 0.34
LINC01250-201ENST00000457478 CDC42BPGQ6DT37 1551 aa17.17■□□□□ 0.34
LINC01250-201ENST00000457478 TPM1P09493 284 aa17.16■□□□□ 0.34
LINC01250-201ENST00000457478 ZCCHC17Q9NP64 241 aaKnown RBP17.16■□□□□ 0.34
LINC01250-201ENST00000457478 TBC1D8O95759 1140 aa17.16■□□□□ 0.34
LINC01250-201ENST00000457478 LRRC8AQ8IWT6 810 aa17.16■□□□□ 0.34
LINC01250-201ENST00000457478 TCP11L2Q8N4U5 519 aa17.16■□□□□ 0.34
LINC01250-201ENST00000457478 NPHP1O15259 732 aa17.15■□□□□ 0.34
LINC01250-201ENST00000457478 TUBB4AP04350 444 aa17.15■□□□□ 0.34
LINC01250-201ENST00000457478 LIG1P18858 919 aa17.15■□□□□ 0.34
LINC01250-201ENST00000457478 KIAA1210Q9ULL0 1709 aa17.15■□□□□ 0.34
LINC01250-201ENST00000457478 SGSM2O43147 1006 aa17.15■□□□□ 0.34
LINC01250-201ENST00000457478 USP8P40818 1118 aa17.15■□□□□ 0.34
LINC01250-201ENST00000457478 BIRC2Q13490 618 aa17.15■□□□□ 0.34
LINC01250-201ENST00000457478 NBPF6Q5VWK0 638 aa17.15■□□□□ 0.34
LINC01250-201ENST00000457478 TADA2BQ86TJ2 420 aa17.15■□□□□ 0.34
LINC01250-201ENST00000457478 NBPF5PQ86XG9 351 aaPredicted RBP17.15■□□□□ 0.34
LINC01250-201ENST00000457478 CCAR2Q8N163 923 aaKnown RBP17.15■□□□□ 0.34
LINC01250-201ENST00000457478 STAG1Q8WVM7 1258 aa17.15■□□□□ 0.34
LINC01250-201ENST00000457478 DNAAF4Q8WXU2 420 aa17.15■□□□□ 0.34
LINC01250-201ENST00000457478 NBPF4Q96M43 638 aa17.15■□□□□ 0.34
LINC01250-201ENST00000457478 ORAI2Q96SN7 254 aa17.15■□□□□ 0.34
LINC01250-201ENST00000457478 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.15■□□□□ 0.34
LINC01250-201ENST00000457478 SMC2O95347 1197 aa17.14■□□□□ 0.33
LINC01250-201ENST00000457478 TTC22Q5TAA0 569 aa17.14■□□□□ 0.33
LINC01250-201ENST00000457478 CASC1Q6TDU7 716 aa17.14■□□□□ 0.33
LINC01250-201ENST00000457478 TRIM5Q9C035 493 aa17.14■□□□□ 0.33
LINC01250-201ENST00000457478 CLIP2Q9UDT6 1046 aa17.14■□□□□ 0.33
LINC01250-201ENST00000457478 RTL1A6NKG5 1358 aa17.14■□□□□ 0.33
LINC01250-201ENST00000457478 A0A087WUV0 522 aaPredicted RBP17.13■□□□□ 0.33
LINC01250-201ENST00000457478 SASH3O75995 380 aa17.13■□□□□ 0.33
LINC01250-201ENST00000457478 CCDC158Q5M9N0 1113 aa17.13■□□□□ 0.33
LINC01250-201ENST00000457478 TDRD7Q8NHU6 1098 aaKnown RBP17.13■□□□□ 0.33
LINC01250-201ENST00000457478 DDX17Q92841 729 aaKnown RBP17.13■□□□□ 0.33
LINC01250-201ENST00000457478 SRCIN1Q9C0H9 1055 aa17.13■□□□□ 0.33
LINC01250-201ENST00000457478 TERF2IPQ9NYB0 399 aa17.13■□□□□ 0.33
LINC01250-201ENST00000457478 AHDC1Q5TGY3 1603 aaPredicted RBP17.13■□□□□ 0.33
LINC01250-201ENST00000457478 ADGRB2O60241 1585 aa17.13■□□□□ 0.33
LINC01250-201ENST00000457478 ESCO1Q5FWF5 840 aa17.13■□□□□ 0.33
LINC01250-201ENST00000457478 ITFG2Q969R8 447 aa17.13■□□□□ 0.33
LINC01250-201ENST00000457478 A1CFQ9NQ94 594 aaKnown RBP17.13■□□□□ 0.33
LINC01250-201ENST00000457478 CNPY2Q9Y2B0 182 aa17.13■□□□□ 0.33
LINC01250-201ENST00000457478 IPO8O15397 1037 aaKnown RBP17.12■□□□□ 0.33
LINC01250-201ENST00000457478 SSH1Q8WYL5 1049 aa17.12■□□□□ 0.33
LINC01250-201ENST00000457478 UBXN4Q92575 508 aa17.12■□□□□ 0.33
LINC01250-201ENST00000457478 ZNF428Q96B54 188 aa17.12■□□□□ 0.33
LINC01250-201ENST00000457478 CALR3Q96L12 384 aaKnown RBP17.12■□□□□ 0.33
LINC01250-201ENST00000457478 MRVI1Q9Y6F6 885 aa17.12■□□□□ 0.33
LINC01250-201ENST00000457478 MINK1Q8N4C8 1332 aaPredicted RBP17.12■□□□□ 0.33
LINC01250-201ENST00000457478 COL16A1Q07092 1604 aaPredicted RBP17.12■□□□□ 0.33
LINC01250-201ENST00000457478 NEUROD2Q15784 382 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms