RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 RBM25P49756 843 aaKnown RBP11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 MTHFSDQ2M296 383 aaKnown RBP11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 TRAPPC3LQ5T215 181 aa11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 RPAP2Q8IXW5 612 aaPredicted RBP11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 SMAP1Q8IYB5 467 aaPredicted RBP11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 TMX1Q9H3N1 280 aa11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 CLIP2Q9UDT6 1046 aa11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 MADDQ8WXG6 1647 aa11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 ZBTB22O15209 634 aa11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 ANXA1P04083 346 aa11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 ZFYVE27Q5T4F4 411 aa11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 SBNO1A3KN83 1393 aa11.4□□□□□ -0.58
MSC-AS1-201ENST00000457356 JMYQ8N9B5 988 aa11.4□□□□□ -0.59
MSC-AS1-201ENST00000457356 MYD88Q99836 296 aa11.4□□□□□ -0.59
MSC-AS1-201ENST00000457356 PIP4K2AP48426 406 aaPredicted RBP11.39□□□□□ -0.59
MSC-AS1-201ENST00000457356 RBM5P52756 815 aaKnown RBP eCLIP11.39□□□□□ -0.59
MSC-AS1-201ENST00000457356 ZSCAN23Q3MJ62 389 aa11.39□□□□□ -0.59
MSC-AS1-201ENST00000457356 ARHGAP29Q52LW3 1261 aa11.39□□□□□ -0.59
MSC-AS1-201ENST00000457356 PCDHB15Q9Y5E8 787 aa11.39□□□□□ -0.59
MSC-AS1-201ENST00000457356 ST5P78524 1137 aa11.39□□□□□ -0.59
MSC-AS1-201ENST00000457356 NOLC1Q14978 699 aaKnown RBP eCLIP11.39□□□□□ -0.59
MSC-AS1-201ENST00000457356 TBC1D9Q6ZT07 1266 aa11.39□□□□□ -0.59
MSC-AS1-201ENST00000457356 ANKRD1Q15327 319 aa11.39□□□□□ -0.59
MSC-AS1-201ENST00000457356 GIMAP6Q6P9H5 292 aa11.39□□□□□ -0.59
MSC-AS1-201ENST00000457356 GPATCH11Q8N954 259 aa11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 ZSWIM4Q9H7M6 989 aa11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 ZNHIT6Q9NWK9 470 aaKnown RBP11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 V9GYY5 206 aaPredicted RBP11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 FAM135BQ49AJ0 1406 aa11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 C6orf229H3BNL8 230 aa11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 TRIM27P14373 513 aa11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 ODF2Q5BJF6 829 aa11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 ARHGEF25Q86VW2 580 aa11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 ANKIB1Q9P2G1 1089 aa11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 GCC2Q8IWJ2 1684 aa11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 KIF1BO60333 1816 aa11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 MCM5P33992 734 aa11.38□□□□□ -0.59
MSC-AS1-201ENST00000457356 SPATA31A6Q5VVP1 1343 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 XBP1P17861 261 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 EPS15P42566 896 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 ZNF165P49910 485 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 CCT4P50991 539 aaKnown RBP11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 GUCY1B3Q02153 619 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 CCDC181Q5TID7 509 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 SAMD1Q6SPF0 538 aaPredicted RBP11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 PPP1R42Q7Z4L9 355 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 GAS2L3Q86XJ1 694 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 CARD10Q9BWT7 1032 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 GNL3LQ9NVN8 582 aaKnown RBP11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 KIDINS220Q9ULH0 1771 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 PLA2R1Q13018 1463 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 ATP5J2-PTCD1G3V325 749 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 PPFIA3O75145 1194 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 PRPF40BQ6NWY9 871 aaKnown RBP11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 TAX1BP1Q86VP1 789 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 ZSCAN31Q96LW9 406 aaPredicted RBP11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 HYPKQ9NX55 129 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 HIP1O00291 1037 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 USP8P40818 1118 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 NIP7Q9Y221 180 aaKnown RBP eCLIP11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 ADGRB3O60242 1522 aa11.37□□□□□ -0.59
MSC-AS1-201ENST00000457356 KIF4BQ2VIQ3 1234 aa11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 AACSQ86V21 672 aa11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 ZKSCAN5Q9Y2L8 839 aa11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 DDX46Q7L014 1031 aaKnown RBP11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 DZIP3Q86Y13 1208 aaKnown RBP11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 CRACR2AQ9BSW2 395 aa11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 MAGEC2Q9UBF1 373 aaPredicted RBP11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 PRDM4Q9UKN5 801 aa11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 GOLGA6L10A6NI86 522 aa11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 GJD4Q96KN9 370 aaPredicted RBP11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 PRIMPOLQ96LW4 560 aa11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 CTDP1Q9Y5B0 961 aaPredicted RBP11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 BIN1O00499 593 aa11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 EPB41L2O43491 1005 aaKnown RBP11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 SCAND2PQ9GZW5 306 aaPredicted RBP11.36□□□□□ -0.59
MSC-AS1-201ENST00000457356 CEP170BQ9Y4F5 1589 aaPredicted RBP11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 WDR17Q8IZU2 1322 aa11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 TSHZ3Q63HK5 1081 aa11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 CPLX3Q8WVH0 158 aa11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 JARID2Q92833 1246 aaPredicted RBP11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 BRMS1Q9HCU9 246 aa11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 CEP126Q9P2H0 1117 aa11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 KIF2AO00139 706 aaPredicted RBP11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 LMAN1P49257 510 aa11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 KLHL10Q6JEL2 608 aa11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 CCDC186Q7Z3E2 898 aa11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 CEP152O94986 1710 aa11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 INO80Q9ULG1 1556 aaPredicted RBP11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 RNMTO43148 476 aaKnown RBP11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 CBFA2T2O43439 604 aa11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 JAKMIP3Q5VZ66 844 aa11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 TIGD1Q96MW7 591 aa11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 ZMYM4Q5VZL5 1548 aa11.35□□□□□ -0.59
MSC-AS1-201ENST00000457356 F6X3S4 739 aa11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 MX1P20591 662 aa11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 GPR162Q16538 588 aa11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 ISM2Q6H9L7 571 aa11.34□□□□□ -0.59
MSC-AS1-201ENST00000457356 TPTE2Q6XPS3 522 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms