RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 NPR1P16066 1061 aa15.71■□□□□ 0.11
C9orf139-201ENST00000457302 FKBP5Q13451 457 aaPredicted RBP15.71■□□□□ 0.11
C9orf139-201ENST00000457302 PI4KAP1Q8N8J0 262 aa15.71■□□□□ 0.11
C9orf139-201ENST00000457302 RPGRQ92834 1020 aaKnown RBP15.71■□□□□ 0.11
C9orf139-201ENST00000457302 MYD88Q99836 296 aa15.71■□□□□ 0.11
C9orf139-201ENST00000457302 MAP3K2Q9Y2U5 619 aa15.71■□□□□ 0.11
C9orf139-201ENST00000457302 UBN2Q6ZU65 1347 aa15.7■□□□□ 0.1
C9orf139-201ENST00000457302 SH3TC1Q8TE82 1336 aa15.7■□□□□ 0.1
C9orf139-201ENST00000457302 SRGNP10124 158 aa15.7■□□□□ 0.1
C9orf139-201ENST00000457302 FLIIQ13045 1269 aa15.7■□□□□ 0.1
C9orf139-201ENST00000457302 TRIM28Q13263 835 aaKnown RBP15.7■□□□□ 0.1
C9orf139-201ENST00000457302 ZNF428Q96B54 188 aa15.7■□□□□ 0.1
C9orf139-201ENST00000457302 CDCA7LQ96GN5 454 aa15.7■□□□□ 0.1
C9orf139-201ENST00000457302 ISCA1Q9BUE6 129 aa15.7■□□□□ 0.1
C9orf139-201ENST00000457302 METTL22Q9BUU2 404 aaPredicted RBP15.7■□□□□ 0.1
C9orf139-201ENST00000457302 TMX4Q9H1E5 349 aaPredicted RBP15.7■□□□□ 0.1
C9orf139-201ENST00000457302 IBTKQ9P2D0 1353 aaPredicted RBP15.7■□□□□ 0.1
C9orf139-201ENST00000457302 NTSR2O95665 410 aa15.69■□□□□ 0.1
C9orf139-201ENST00000457302 SLC10A5Q5PT55 438 aa15.69■□□□□ 0.1
C9orf139-201ENST00000457302 CCDC191Q8NCU4 936 aa15.69■□□□□ 0.1
C9orf139-201ENST00000457302 RBM17Q96I25 401 aaKnown RBP15.69■□□□□ 0.1
C9orf139-201ENST00000457302 ANKRD36CQ5JPF3 1778 aa15.69■□□□□ 0.1
C9orf139-201ENST00000457302 KLRG2A4D1S0 409 aaPredicted RBP15.68■□□□□ 0.1
C9orf139-201ENST00000457302 SOGA3Q5TF21 947 aa15.68■□□□□ 0.1
C9orf139-201ENST00000457302 G2E3Q7L622 706 aa15.68■□□□□ 0.1
C9orf139-201ENST00000457302 CWC25Q9NXE8 425 aaPredicted RBP15.68■□□□□ 0.1
C9orf139-201ENST00000457302 ANKRD31Q8N7Z5 1873 aa15.67■□□□□ 0.1
C9orf139-201ENST00000457302 CT47B1P0C2W7 299 aaPredicted RBP15.67■□□□□ 0.1
C9orf139-201ENST00000457302 ZNF219Q9P2Y4 722 aaPredicted RBP15.67■□□□□ 0.1
C9orf139-201ENST00000457302 ARFGEF1Q9Y6D6 1849 aa15.66■□□□□ 0.1
C9orf139-201ENST00000457302 KIAA1551Q9HCM1 1747 aa15.66■□□□□ 0.1
C9orf139-201ENST00000457302 BRCA1P38398 1863 aaKnown RBP15.66■□□□□ 0.1
C9orf139-201ENST00000457302 RTL5Q5HYW3 569 aaPredicted RBP15.66■□□□□ 0.1
C9orf139-201ENST00000457302 TRMT2AQ8IZ69 625 aaKnown RBP15.66■□□□□ 0.1
C9orf139-201ENST00000457302 DNAAF4Q8WXU2 420 aa15.66■□□□□ 0.1
C9orf139-201ENST00000457302 FAM89AQ96GI7 184 aa15.66■□□□□ 0.1
C9orf139-201ENST00000457302 ARFGEF2Q9Y6D5 1785 aa15.65■□□□□ 0.1
C9orf139-201ENST00000457302 C21orf2O43822 256 aa15.65■□□□□ 0.1
C9orf139-201ENST00000457302 HCLS1P14317 486 aaPredicted RBP15.65■□□□□ 0.1
C9orf139-201ENST00000457302 ALDH1L2Q3SY69 923 aa15.65■□□□□ 0.1
C9orf139-201ENST00000457302 DDX46Q7L014 1031 aaKnown RBP15.65■□□□□ 0.1
C9orf139-201ENST00000457302 ZBTB38Q8NAP3 1195 aaPredicted RBP15.65■□□□□ 0.1
C9orf139-201ENST00000457302 IRS4O14654 1257 aaPredicted RBP15.64■□□□□ 0.09
C9orf139-201ENST00000457302 PRPF40BQ6NWY9 871 aaKnown RBP15.64■□□□□ 0.09
C9orf139-201ENST00000457302 DLEC1Q9Y238 1755 aa15.64■□□□□ 0.09
C9orf139-201ENST00000457302 PCCAP05165 728 aaPredicted RBP15.63■□□□□ 0.09
C9orf139-201ENST00000457302 HOXA10P31260 410 aaPredicted RBP15.63■□□□□ 0.09
C9orf139-201ENST00000457302 CRY2Q49AN0 593 aa15.63■□□□□ 0.09
C9orf139-201ENST00000457302 CRAMP1Q96RY5 1269 aa15.63■□□□□ 0.09
C9orf139-201ENST00000457302 CACNA1SQ13698 1873 aa15.63■□□□□ 0.09
C9orf139-201ENST00000457302 ABCC12Q96J65 1359 aa15.62■□□□□ 0.09
C9orf139-201ENST00000457302 RIC1Q4ADV7 1423 aa15.62■□□□□ 0.09
C9orf139-201ENST00000457302 BBOX1O75936 387 aa15.62■□□□□ 0.09
C9orf139-201ENST00000457302 CC2D2BQ6DHV5 1058 aa15.62■□□□□ 0.09
C9orf139-201ENST00000457302 SLC4A10Q6U841 1118 aa15.62■□□□□ 0.09
C9orf139-201ENST00000457302 SYNE4Q8N205 404 aa15.62■□□□□ 0.09
C9orf139-201ENST00000457302 MRPL50Q8N5N7 158 aaKnown RBP15.62■□□□□ 0.09
C9orf139-201ENST00000457302 LINS1Q8NG48 757 aa15.62■□□□□ 0.09
C9orf139-201ENST00000457302 SSH1Q8WYL5 1049 aa15.62■□□□□ 0.09
C9orf139-201ENST00000457302 SMC4Q9NTJ3 1288 aa15.62■□□□□ 0.09
C9orf139-201ENST00000457302 ADCY9O60503 1353 aa15.62■□□□□ 0.09
C9orf139-201ENST00000457302 NEURL1BA8MQ27 555 aa15.61■□□□□ 0.09
C9orf139-201ENST00000457302 CWF19L2Q2TBE0 894 aaKnown RBP15.61■□□□□ 0.09
C9orf139-201ENST00000457302 GRIPAP1Q4V328 841 aa15.61■□□□□ 0.09
C9orf139-201ENST00000457302 CCDC93Q567U6 631 aa15.61■□□□□ 0.09
C9orf139-201ENST00000457302 RTKN2Q8IZC4 609 aa15.61■□□□□ 0.09
C9orf139-201ENST00000457302 PTPRCP08575 1304 aa15.61■□□□□ 0.09
C9orf139-201ENST00000457302 SLX4Q8IY92 1834 aa15.6■□□□□ 0.09
C9orf139-201ENST00000457302 PDE8AO60658 829 aa15.6■□□□□ 0.09
C9orf139-201ENST00000457302 IGKV5-2P06315 115 aa15.6■□□□□ 0.09
C9orf139-201ENST00000457302 ZBED9Q6R2W3 1325 aa15.6■□□□□ 0.09
C9orf139-201ENST00000457302 F6X3S4 739 aa15.59■□□□□ 0.09
C9orf139-201ENST00000457302 LMNB1P20700 586 aa15.59■□□□□ 0.09
C9orf139-201ENST00000457302 GCKRQ14397 625 aa15.59■□□□□ 0.09
C9orf139-201ENST00000457302 SF3B3Q15393 1217 aaKnown RBP15.59■□□□□ 0.09
C9orf139-201ENST00000457302 CCDC152Q4G0S7 254 aa15.59■□□□□ 0.09
C9orf139-201ENST00000457302 C9orf131Q5VYM1 1079 aa15.59■□□□□ 0.09
C9orf139-201ENST00000457302 JARID2Q92833 1246 aaPredicted RBP15.59■□□□□ 0.09
C9orf139-201ENST00000457302 BCL2L13Q9BXK5 485 aa15.59■□□□□ 0.09
C9orf139-201ENST00000457302 SRCIN1Q9C0H9 1055 aa15.59■□□□□ 0.09
C9orf139-201ENST00000457302 C9orf78Q9NZ63 289 aaPredicted RBP15.59■□□□□ 0.09
C9orf139-201ENST00000457302 RNF181Q9P0P0 153 aa15.59■□□□□ 0.09
C9orf139-201ENST00000457302 GOLGB1Q14789 3259 aaKnown RBP15.59■□□□□ 0.09
C9orf139-201ENST00000457302 COL11A2P13942 1736 aaPredicted RBP15.58■□□□□ 0.08
C9orf139-201ENST00000457302 H7C1W4 665 aa15.58■□□□□ 0.08
C9orf139-201ENST00000457302 PPEF1O14829 653 aaPredicted RBP15.58■□□□□ 0.08
C9orf139-201ENST00000457302 ALDH1L1O75891 902 aa15.58■□□□□ 0.08
C9orf139-201ENST00000457302 TMC4Q7Z404 712 aa15.58■□□□□ 0.08
C9orf139-201ENST00000457302 TAOK3Q9H2K8 898 aa15.58■□□□□ 0.08
C9orf139-201ENST00000457302 UTRNP46939 3433 aa15.58■□□□□ 0.08
C9orf139-201ENST00000457302 CDHR2Q9BYE9 1310 aa15.58■□□□□ 0.08
C9orf139-201ENST00000457302 CCDC88AQ3V6T2 1871 aa15.58■□□□□ 0.08
C9orf139-201ENST00000457302 IPO8O15397 1037 aaKnown RBP15.57■□□□□ 0.08
C9orf139-201ENST00000457302 GRAPQ13588 217 aa15.57■□□□□ 0.08
C9orf139-201ENST00000457302 BEND3Q5T5X7 828 aa15.57■□□□□ 0.08
C9orf139-201ENST00000457302 C3orf67Q6ZVT6 689 aa15.57■□□□□ 0.08
C9orf139-201ENST00000457302 UBE3BQ7Z3V4 1068 aa15.57■□□□□ 0.08
C9orf139-201ENST00000457302 GRAPLQ8TC17 118 aaPredicted RBP15.57■□□□□ 0.08
C9orf139-201ENST00000457302 SP8Q8IXZ3 490 aa15.56■□□□□ 0.08
C9orf139-201ENST00000457302 C7orf43Q8WVR3 580 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms