RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 FAM177BA6PVY3 158 aa17.67■□□□□ 0.42
SNHG17-208ENST00000456953 CA12O43570 354 aa17.67■□□□□ 0.42
SNHG17-208ENST00000456953 EPS15P42566 896 aa17.67■□□□□ 0.42
SNHG17-208ENST00000456953 FMR1Q06787 632 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNHG17-208ENST00000456953 TLL2Q9Y6L7 1015 aa17.67■□□□□ 0.42
SNHG17-208ENST00000456953 NBPF26B4DH59 902 aa17.66■□□□□ 0.42
SNHG17-208ENST00000456953 TRAF5O00463 557 aa17.66■□□□□ 0.42
SNHG17-208ENST00000456953 CC2D1BQ5T0F9 858 aaKnown RBP17.66■□□□□ 0.42
SNHG17-208ENST00000456953 NBPF10Q6P3W6 841 aaKnown RBP17.66■□□□□ 0.42
SNHG17-208ENST00000456953 NBPF15Q8N660 670 aa17.66■□□□□ 0.42
SNHG17-208ENST00000456953 LARGE2Q8N3Y3 721 aa17.65■□□□□ 0.42
SNHG17-208ENST00000456953 NYXQ9GZU5 481 aa17.65■□□□□ 0.42
SNHG17-208ENST00000456953 TSKSQ9UJT2 592 aa17.65■□□□□ 0.42
SNHG17-208ENST00000456953 PER1O15534 1290 aaPredicted RBP17.64■□□□□ 0.41
SNHG17-208ENST00000456953 ABCC12Q96J65 1359 aa17.64■□□□□ 0.41
SNHG17-208ENST00000456953 PDE4DIPQ5VU43 2346 aa17.64■□□□□ 0.41
SNHG17-208ENST00000456953 AOC2O75106 756 aa17.63■□□□□ 0.41
SNHG17-208ENST00000456953 HOXA10P31260 410 aaPredicted RBP17.63■□□□□ 0.41
SNHG17-208ENST00000456953 HLFQ16534 295 aa17.63■□□□□ 0.41
SNHG17-208ENST00000456953 SAPCD2Q86UD0 394 aa17.63■□□□□ 0.41
SNHG17-208ENST00000456953 PHACTR3Q96KR7 559 aa17.63■□□□□ 0.41
SNHG17-208ENST00000456953 MCOLN1Q9GZU1 580 aa17.63■□□□□ 0.41
SNHG17-208ENST00000456953 BRPF1P55201 1214 aaPredicted RBP17.62■□□□□ 0.41
SNHG17-208ENST00000456953 RPGRQ92834 1020 aaKnown RBP17.62■□□□□ 0.41
SNHG17-208ENST00000456953 HHIPL1Q96JK4 782 aa17.62■□□□□ 0.41
SNHG17-208ENST00000456953 CFAP44Q96MT7 982 aa17.62■□□□□ 0.41
SNHG17-208ENST00000456953 ADARB2Q9NS39 739 aaKnown RBP17.62■□□□□ 0.41
SNHG17-208ENST00000456953 KIF7Q2M1P5 1343 aa17.62■□□□□ 0.41
SNHG17-208ENST00000456953 RIC1Q4ADV7 1423 aa17.62■□□□□ 0.41
SNHG17-208ENST00000456953 PRKAR2BP31323 418 aa17.61■□□□□ 0.41
SNHG17-208ENST00000456953 NUTM1Q86Y26 1132 aa17.61■□□□□ 0.41
SNHG17-208ENST00000456953 NIM1KQ8IY84 436 aa17.61■□□□□ 0.41
SNHG17-208ENST00000456953 RTF1Q92541 710 aaKnown RBP17.61■□□□□ 0.41
SNHG17-208ENST00000456953 GPRC5DQ9NZD1 345 aa17.61■□□□□ 0.41
SNHG17-208ENST00000456953 RSPH6AQ9H0K4 717 aa17.6■□□□□ 0.41
SNHG17-208ENST00000456953 NPC1L1Q9UHC9 1359 aa17.6■□□□□ 0.41
SNHG17-208ENST00000456953 IBTKQ9P2D0 1353 aaPredicted RBP17.59■□□□□ 0.41
SNHG17-208ENST00000456953 ERVV-1B6SEH8 477 aa17.59■□□□□ 0.41
SNHG17-208ENST00000456953 CELF2O95319 508 aaKnown RBP17.59■□□□□ 0.41
SNHG17-208ENST00000456953 MCM10Q7L590 875 aa17.59■□□□□ 0.41
SNHG17-208ENST00000456953 CRAMP1Q96RY5 1269 aa17.59■□□□□ 0.41
SNHG17-208ENST00000456953 CASP8AP2Q9UKL3 1982 aa17.59■□□□□ 0.41
SNHG17-208ENST00000456953 PPEF1O14829 653 aaPredicted RBP17.58■□□□□ 0.4
SNHG17-208ENST00000456953 PPIP5K2O43314 1243 aa17.58■□□□□ 0.4
SNHG17-208ENST00000456953 RBM17Q96I25 401 aaKnown RBP17.58■□□□□ 0.4
SNHG17-208ENST00000456953 VPS33BQ9H267 617 aa17.58■□□□□ 0.4
SNHG17-208ENST00000456953 DGKZQ13574 1117 aa17.57■□□□□ 0.4
SNHG17-208ENST00000456953 PGAP2Q9UHJ9 254 aa17.57■□□□□ 0.4
SNHG17-208ENST00000456953 LAMB4A4D0S4 1761 aa17.56■□□□□ 0.4
SNHG17-208ENST00000456953 MAP3K15Q6ZN16 1313 aa17.56■□□□□ 0.4
SNHG17-208ENST00000456953 CDHR2Q9BYE9 1310 aa17.56■□□□□ 0.4
SNHG17-208ENST00000456953 ZC3H15Q8WU90 426 aaKnown RBP17.56■□□□□ 0.4
SNHG17-208ENST00000456953 TMX4Q9H1E5 349 aaPredicted RBP17.56■□□□□ 0.4
SNHG17-208ENST00000456953 ZNRF3Q9ULT6 936 aa17.56■□□□□ 0.4
SNHG17-208ENST00000456953 NUP98P52948 1817 aa17.56■□□□□ 0.4
SNHG17-208ENST00000456953 HTATSF1O43719 755 aaKnown RBP17.55■□□□□ 0.4
SNHG17-208ENST00000456953 CXCL9Q07325 125 aa17.55■□□□□ 0.4
SNHG17-208ENST00000456953 AOC3Q16853 763 aa17.55■□□□□ 0.4
SNHG17-208ENST00000456953 CIAPIN1Q6FI81 312 aa17.55■□□□□ 0.4
SNHG17-208ENST00000456953 KIF6Q6ZMV9 814 aa17.55■□□□□ 0.4
SNHG17-208ENST00000456953 CFAP53Q96M91 514 aa17.55■□□□□ 0.4
SNHG17-208ENST00000456953 GLIS2Q9BZE0 524 aaPredicted RBP17.55■□□□□ 0.4
SNHG17-208ENST00000456953 TCERG1O14776 1098 aaKnown RBP17.54■□□□□ 0.4
SNHG17-208ENST00000456953 GMPSP49915 693 aaPredicted RBP17.54■□□□□ 0.4
SNHG17-208ENST00000456953 NOGQ13253 232 aa17.54■□□□□ 0.4
SNHG17-208ENST00000456953 SLC51AQ86UW1 340 aa17.54■□□□□ 0.4
SNHG17-208ENST00000456953 NGEFQ8N5V2 710 aa17.54■□□□□ 0.4
SNHG17-208ENST00000456953 ATP6V0A2Q9Y487 856 aa17.54■□□□□ 0.4
SNHG17-208ENST00000456953 UBN2Q6ZU65 1347 aa17.53■□□□□ 0.4
SNHG17-208ENST00000456953 GPTP24298 496 aa17.53■□□□□ 0.4
SNHG17-208ENST00000456953 ZEB1P37275 1124 aaPredicted RBP17.53■□□□□ 0.4
SNHG17-208ENST00000456953 DCTN1Q14203 1278 aa17.53■□□□□ 0.4
SNHG17-208ENST00000456953 TAF7Q15545 349 aaPredicted RBP17.53■□□□□ 0.4
SNHG17-208ENST00000456953 SUSD4Q5VX71 490 aa17.53■□□□□ 0.4
SNHG17-208ENST00000456953 SUPT20HQ8NEM7 779 aa17.53■□□□□ 0.4
SNHG17-208ENST00000456953 ZNF408Q9H9D4 720 aa17.53■□□□□ 0.4
SNHG17-208ENST00000456953 NUDCQ9Y266 331 aa17.53■□□□□ 0.4
SNHG17-208ENST00000456953 CNGB1Q14028 1251 aaPredicted RBP17.52■□□□□ 0.4
SNHG17-208ENST00000456953 TTLL7Q6ZT98 887 aa17.52■□□□□ 0.4
SNHG17-208ENST00000456953 CDC37L1Q7L3B6 337 aa17.52■□□□□ 0.4
SNHG17-208ENST00000456953 RTFDC1Q9BY42 306 aaPredicted RBP17.52■□□□□ 0.4
SNHG17-208ENST00000456953 NTSR2O95665 410 aa17.51■□□□□ 0.39
SNHG17-208ENST00000456953 U2AF1L5P0DN76 240 aaPredicted RBP17.51■□□□□ 0.39
SNHG17-208ENST00000456953 U2AF1Q01081 240 aaKnown RBP eCLIP17.51■□□□□ 0.39
SNHG17-208ENST00000456953 C3orf67Q6ZVT6 689 aa17.51■□□□□ 0.39
SNHG17-208ENST00000456953 ZNF34Q8IZ26 560 aa17.51■□□□□ 0.39
SNHG17-208ENST00000456953 HIRAP54198 1017 aaPredicted RBP17.5■□□□□ 0.39
SNHG17-208ENST00000456953 TNIP1Q15025 636 aa17.5■□□□□ 0.39
SNHG17-208ENST00000456953 PPP1R42Q7Z4L9 355 aa17.5■□□□□ 0.39
SNHG17-208ENST00000456953 NLRP3Q96P20 1036 aa17.5■□□□□ 0.39
SNHG17-208ENST00000456953 BCL2L13Q9BXK5 485 aa17.5■□□□□ 0.39
SNHG17-208ENST00000456953 ZBTB3Q9H5J0 574 aa17.5■□□□□ 0.39
SNHG17-208ENST00000456953 MIS18AQ9NYP9 233 aa17.5■□□□□ 0.39
SNHG17-208ENST00000456953 RRP7AQ9Y3A4 280 aaKnown RBP17.5■□□□□ 0.39
SNHG17-208ENST00000456953 HUNKP57058 714 aa17.49■□□□□ 0.39
SNHG17-208ENST00000456953 KIAA2012Q0VF49 1180 aa17.48■□□□□ 0.39
SNHG17-208ENST00000456953 PARP10Q53GL7 1025 aa17.48■□□□□ 0.39
SNHG17-208ENST00000456953 DPP8Q6V1X1 898 aaPredicted RBP17.48■□□□□ 0.39
SNHG17-208ENST00000456953 GIGYF2Q6Y7W6 1299 aaKnown RBP17.48■□□□□ 0.39
SNHG17-208ENST00000456953 TRPM4Q8TD43 1214 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms