RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 TLR7Q9NYK1 1049 aaKnown RBP22.15■■□□□ 1.14
SEMA3B-209ENST00000456560 ESPNB1AK53 854 aa22.15■■□□□ 1.14
SEMA3B-209ENST00000456560 COPRSQ9NQ92 184 aa22.15■■□□□ 1.14
SEMA3B-209ENST00000456560 HIP1O00291 1037 aa22.14■■□□□ 1.14
SEMA3B-209ENST00000456560 RFX5P48382 616 aaPredicted RBP22.14■■□□□ 1.14
SEMA3B-209ENST00000456560 RUFY3Q7L099 469 aa22.14■■□□□ 1.14
SEMA3B-209ENST00000456560 KLHDC4Q8TBB5 520 aa22.14■■□□□ 1.14
SEMA3B-209ENST00000456560 TRIM44Q96DX7 344 aaPredicted RBP22.14■■□□□ 1.14
SEMA3B-209ENST00000456560 SIL1Q9H173 461 aa22.14■■□□□ 1.14
SEMA3B-209ENST00000456560 ROBO1Q9Y6N7 1651 aa22.14■■□□□ 1.13
SEMA3B-209ENST00000456560 PIP4K2AP48426 406 aaPredicted RBP22.14■■□□□ 1.13
SEMA3B-209ENST00000456560 TM6SF1Q9BZW5 370 aa22.14■■□□□ 1.13
SEMA3B-209ENST00000456560 LIMCH1Q9UPQ0 1083 aa22.14■■□□□ 1.13
SEMA3B-209ENST00000456560 LAMB4A4D0S4 1761 aa22.13■■□□□ 1.13
SEMA3B-209ENST00000456560 NECTIN1Q15223 517 aa22.13■■□□□ 1.13
SEMA3B-209ENST00000456560 RABL6Q3YEC7 729 aaPredicted RBP22.13■■□□□ 1.13
SEMA3B-209ENST00000456560 ARFGEF2Q9Y6D5 1785 aa22.13■■□□□ 1.13
SEMA3B-209ENST00000456560 CCDC171Q6TFL3 1326 aa22.12■■□□□ 1.13
SEMA3B-209ENST00000456560 NMIQ13287 307 aaPredicted RBP22.12■■□□□ 1.13
SEMA3B-209ENST00000456560 WDR33Q9C0J8 1336 aaKnown RBP22.12■■□□□ 1.13
SEMA3B-209ENST00000456560 AFDNP55196 1824 aaKnown RBP22.11■■□□□ 1.13
SEMA3B-209ENST00000456560 PRPF40BQ6NWY9 871 aaKnown RBP22.11■■□□□ 1.13
SEMA3B-209ENST00000456560 ZSWIM6Q9HCJ5 1215 aa22.11■■□□□ 1.13
SEMA3B-209ENST00000456560 NSFL1CQ9UNZ2 370 aaKnown RBP22.11■■□□□ 1.13
SEMA3B-209ENST00000456560 RPAP1Q9BWH6 1393 aaPredicted RBP22.11■■□□□ 1.13
SEMA3B-209ENST00000456560 CASTP20810 708 aaKnown RBP22.11■■□□□ 1.13
SEMA3B-209ENST00000456560 PLBD2Q8NHP8 589 aa22.11■■□□□ 1.13
SEMA3B-209ENST00000456560 FAM227BQ96M60 508 aa22.11■■□□□ 1.13
SEMA3B-209ENST00000456560 RBM27Q9P2N5 1060 aaKnown RBP22.11■■□□□ 1.13
SEMA3B-209ENST00000456560 ERBB4Q15303 1308 aa22.11■■□□□ 1.13
SEMA3B-209ENST00000456560 CASP7P55210 303 aa22.1■■□□□ 1.13
SEMA3B-209ENST00000456560 PTPN12Q05209 780 aaKnown RBP22.1■■□□□ 1.13
SEMA3B-209ENST00000456560 ADCK5Q3MIX3 580 aa22.1■■□□□ 1.13
SEMA3B-209ENST00000456560 VPS53Q5VIR6 699 aa22.1■■□□□ 1.13
SEMA3B-209ENST00000456560 JARID2Q92833 1246 aaPredicted RBP22.1■■□□□ 1.13
SEMA3B-209ENST00000456560 MAP4K1Q92918 833 aa22.1■■□□□ 1.13
SEMA3B-209ENST00000456560 UBAP1LF5GYI3 381 aa22.1■■□□□ 1.13
SEMA3B-209ENST00000456560 MBD3O95983 291 aa22.1■■□□□ 1.13
SEMA3B-209ENST00000456560 CPA1P15085 419 aa22.1■■□□□ 1.13
SEMA3B-209ENST00000456560 NASPP49321 788 aaPredicted RBP22.1■■□□□ 1.13
SEMA3B-209ENST00000456560 BOLA2Q9H3K6 86 aa22.1■■□□□ 1.13
SEMA3B-209ENST00000456560 WDR17Q8IZU2 1322 aa22.1■■□□□ 1.13
SEMA3B-209ENST00000456560 NHSL1Q5SYE7 1610 aa22.09■■□□□ 1.13
SEMA3B-209ENST00000456560 JAKMIP1Q96N16 626 aaKnown RBP22.09■■□□□ 1.13
SEMA3B-209ENST00000456560 TMEM63CQ9P1W3 806 aa22.09■■□□□ 1.13
SEMA3B-209ENST00000456560 UBE3BQ7Z3V4 1068 aa22.08■■□□□ 1.13
SEMA3B-209ENST00000456560 PPP1R9BQ96SB3 815 aa22.08■■□□□ 1.13
SEMA3B-209ENST00000456560 RBM8AQ9Y5S9 174 aaKnown RBP22.08■■□□□ 1.13
SEMA3B-209ENST00000456560 NBPF26B4DH59 902 aa22.08■■□□□ 1.13
SEMA3B-209ENST00000456560 TOM1O60784 492 aa22.08■■□□□ 1.13
SEMA3B-209ENST00000456560 NBPF14Q5TI25 921 aa22.08■■□□□ 1.13
SEMA3B-209ENST00000456560 NBPF10Q6P3W6 841 aaKnown RBP22.08■■□□□ 1.13
SEMA3B-209ENST00000456560 NBPF15Q8N660 670 aa22.08■■□□□ 1.13
SEMA3B-209ENST00000456560 PDRG1Q9NUG6 133 aa22.08■■□□□ 1.13
SEMA3B-209ENST00000456560 CREB3L3Q68CJ9 461 aa22.07■■□□□ 1.12
SEMA3B-209ENST00000456560 ZCRB1Q8TBF4 217 aaKnown RBP22.07■■□□□ 1.12
SEMA3B-209ENST00000456560 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.07■■□□□ 1.12
SEMA3B-209ENST00000456560 A0A087WZG4 1122 aa22.07■■□□□ 1.12
SEMA3B-209ENST00000456560 A0A0D9SFI3 127 aa22.07■■□□□ 1.12
SEMA3B-209ENST00000456560 ATP5J2-PTCD1G3V325 749 aa22.07■■□□□ 1.12
SEMA3B-209ENST00000456560 PTCD1O75127 700 aaKnown RBP22.07■■□□□ 1.12
SEMA3B-209ENST00000456560 LARP6Q9BRS8 491 aaKnown RBP22.07■■□□□ 1.12
SEMA3B-209ENST00000456560 CYP46A1Q9Y6A2 500 aa22.07■■□□□ 1.12
SEMA3B-209ENST00000456560 PCDH11XQ9BZA7 1347 aa22.07■■□□□ 1.12
SEMA3B-209ENST00000456560 PCDH11YQ9BZA8 1340 aa22.07■■□□□ 1.12
SEMA3B-209ENST00000456560 MED23Q9ULK4 1368 aa22.07■■□□□ 1.12
SEMA3B-209ENST00000456560 LARGE1O95461 756 aa22.06■■□□□ 1.12
SEMA3B-209ENST00000456560 ATP5JP18859 108 aa22.06■■□□□ 1.12
SEMA3B-209ENST00000456560 TNNI3KQ59H18 835 aa22.06■■□□□ 1.12
SEMA3B-209ENST00000456560 ZSCAN31Q96LW9 406 aaPredicted RBP22.06■■□□□ 1.12
SEMA3B-209ENST00000456560 FSD1Q9BTV5 496 aa22.06■■□□□ 1.12
SEMA3B-209ENST00000456560 FPGT-TNNI3KV9GXZ4 949 aa22.06■■□□□ 1.12
SEMA3B-209ENST00000456560 UBR2Q8IWV8 1755 aa22.06■■□□□ 1.12
SEMA3B-209ENST00000456560 ERVV-2B6SEH9 535 aa22.06■■□□□ 1.12
SEMA3B-209ENST00000456560 CCDC173Q0VFZ6 552 aa22.06■■□□□ 1.12
SEMA3B-209ENST00000456560 TFCP2Q12800 502 aa22.06■■□□□ 1.12
SEMA3B-209ENST00000456560 NKX1-1Q15270 411 aaPredicted RBP22.06■■□□□ 1.12
SEMA3B-209ENST00000456560 PRDM11Q9NQV5 511 aa22.06■■□□□ 1.12
SEMA3B-209ENST00000456560 JCADQ9P266 1359 aa22.05■■□□□ 1.12
SEMA3B-209ENST00000456560 ZKSCAN1P17029 563 aaPredicted RBP22.05■■□□□ 1.12
SEMA3B-209ENST00000456560 PRIM1P49642 420 aaKnown RBP22.05■■□□□ 1.12
SEMA3B-209ENST00000456560 RBSNQ9H1K0 784 aa22.05■■□□□ 1.12
SEMA3B-209ENST00000456560 DBNLQ9UJU6 430 aaKnown RBP22.05■■□□□ 1.12
SEMA3B-209ENST00000456560 H7C1W4 665 aa22.04■■□□□ 1.12
SEMA3B-209ENST00000456560 SLC27A2O14975 620 aa22.04■■□□□ 1.12
SEMA3B-209ENST00000456560 ZSCAN22P10073 491 aaPredicted RBP22.04■■□□□ 1.12
SEMA3B-209ENST00000456560 LRSAM1Q6UWE0 723 aa22.04■■□□□ 1.12
SEMA3B-209ENST00000456560 TOM1L2Q6ZVM7 507 aa22.04■■□□□ 1.12
SEMA3B-209ENST00000456560 SH2B1Q9NRF2 756 aaPredicted RBP22.04■■□□□ 1.12
SEMA3B-209ENST00000456560 COL5A2P05997 1499 aaPredicted RBP22.04■■□□□ 1.12
SEMA3B-209ENST00000456560 TMEM87AQ8NBN3 555 aa22.03■■□□□ 1.12
SEMA3B-209ENST00000456560 SMC3Q9UQE7 1217 aa22.03■■□□□ 1.12
SEMA3B-209ENST00000456560 KCPQ6ZWJ8 1503 aa22.03■■□□□ 1.12
SEMA3B-209ENST00000456560 SYT1P21579 422 aa22.03■■□□□ 1.12
SEMA3B-209ENST00000456560 FOXO4P98177 505 aa22.03■■□□□ 1.12
SEMA3B-209ENST00000456560 PAPPAQ13219 1627 aa22.03■■□□□ 1.12
SEMA3B-209ENST00000456560 STX6O43752 255 aa22.02■■□□□ 1.12
SEMA3B-209ENST00000456560 USP48Q86UV5 1035 aa22.02■■□□□ 1.12
SEMA3B-209ENST00000456560 CERKQ8TCT0 537 aa22.02■■□□□ 1.12
SEMA3B-209ENST00000456560 NUP188Q5SRE5 1749 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms