RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ST18O60284 1047 aa5.4□□□□□ -1.55
DEPDC1-202ENST00000456315 ANXA1P04083 346 aa5.4□□□□□ -1.55
DEPDC1-202ENST00000456315 CCDC112Q8NEF3 446 aa5.4□□□□□ -1.55
DEPDC1-202ENST00000456315 GPHNQ9NQX3 736 aaPredicted RBP5.4□□□□□ -1.55
DEPDC1-202ENST00000456315 AKAP2Q9Y2D5 859 aa5.4□□□□□ -1.55
DEPDC1-202ENST00000456315 PARP3Q9Y6F1 533 aa5.4□□□□□ -1.55
DEPDC1-202ENST00000456315 ZCCHC11Q5TAX3 1644 aaKnown RBP5.4□□□□□ -1.55
DEPDC1-202ENST00000456315 FAM135BQ49AJ0 1406 aa5.4□□□□□ -1.55
DEPDC1-202ENST00000456315 SRLQ86TD4 932 aa5.4□□□□□ -1.55
DEPDC1-202ENST00000456315 FBXW7Q969H0 707 aa5.4□□□□□ -1.55
DEPDC1-202ENST00000456315 HINFPQ9BQA5 517 aa5.4□□□□□ -1.55
DEPDC1-202ENST00000456315 C14orf93Q9H972 538 aaKnown RBP5.4□□□□□ -1.55
DEPDC1-202ENST00000456315 MTF1Q14872 753 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 ZSCAN26Q16670 478 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 UVSSAQ2YD98 709 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 CEP135Q66GS9 1140 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 LARP1Q6PKG0 1096 aaKnown RBP5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 TEX2Q8IWB9 1127 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 ENGASEQ8NFI3 743 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 CABP1Q9NZU7 370 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 STAG3Q9UJ98 1225 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 MAP2P11137 1827 aaKnown RBP5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 ARHGEF5Q12774 1597 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 CT47B1P0C2W7 299 aaPredicted RBP5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 IL13P35225 146 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 SPRED3Q2MJR0 410 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 DPCR1Q3MIW9 517 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 TDRD7Q8NHU6 1098 aaKnown RBP5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 CCDC34Q96HJ3 373 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 TRIM5Q9C035 493 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 YTHDC2Q9H6S0 1430 aaKnown RBP5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 CCDC69A6NI79 296 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 HSP90AA4PQ58FG1 418 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 FAM227BQ96M60 508 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 DIAPH3Q9NSV4 1193 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 VPS37CA5D8V6 355 aaPredicted RBP5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 ZSWIM4Q9H7M6 989 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 TTC21AQ8NDW8 1320 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 STRCQ7RTU9 1775 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 PREX1Q8TCU6 1659 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 NRXN1Q9ULB1 1477 aa5.39□□□□□ -1.55
DEPDC1-202ENST00000456315 GJB2P29033 226 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 CEBPZQ03701 1054 aaKnown RBP5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 NME9Q86XW9 330 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 CARD6Q9BX69 1037 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 IL16Q14005 1332 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 MINK1Q8N4C8 1332 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 UBE2Q2LH0YL09 131 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 RNF225M0QZC1 329 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 CHL1O00533 1208 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 NECTIN1Q15223 517 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 ISM2Q6H9L7 571 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 KRBA2Q6ZNG9 492 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 ZNF397Q8NF99 534 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 LEO1Q8WVC0 666 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 LRRC2Q9BYS8 371 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 PHACTR2O75167 634 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 CDC27P30260 824 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 SKIDA1Q1XH10 827 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 SLC4A10Q6U841 1118 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 KAZALD1Q96I82 304 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 CFAP44Q96MT7 982 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 SRRTQ9BXP5 876 aaKnown RBP5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 TRIOO75962 3097 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 CDK12Q9NYV4 1490 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 TMEM232C9JQI7 657 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 SLC4A2P04920 1241 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 IRX3P78415 501 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 NFE2L2Q16236 605 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 WAPLQ7Z5K2 1190 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 PNKPQ96T60 521 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 RABEP2Q9H5N1 569 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 SOS1Q07889 1333 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 ADGRL1O94910 1474 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 PDE6BP35913 854 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 TOB2Q14106 344 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 HSP90AB2PQ58FF8 381 aa5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 DHX40Q8IX18 779 aaKnown RBP5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 NPHP4O75161 1426 aaPredicted RBP5.38□□□□□ -1.55
DEPDC1-202ENST00000456315 DUOX2Q9NRD8 1548 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 C5orf42Q9H799 3197 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 CTDNEP1O95476 244 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 GUCY2CP25092 1073 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 MUM1L1Q5H9M0 696 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 ICE2Q659A1 982 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 OTUD7BQ6GQQ9 843 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 CLIP2Q9UDT6 1046 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 MROH2AA6NES4 1674 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 EVC2Q86UK5 1308 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 WDR33Q9C0J8 1336 aaKnown RBP5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 DIAPH1O60610 1272 aaKnown RBP5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 CHGAP10645 457 aaKnown RBP5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 KIRREL3Q8IZU9 778 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 PHAXQ9H814 394 aaKnown RBP5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 IPO8O15397 1037 aaKnown RBP5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 REC8O95072 547 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 GORABQ5T7V8 394 aa5.37□□□□□ -1.55
DEPDC1-202ENST00000456315 CC2D1AQ6P1N0 951 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms