RNA–Protein interactions for RNA: ENST00000456150.5

CSPG5-203, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 1 (best) BASIC

Gene CSPG5, Length 2,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-203ENST00000456150 CHAMP1Q96JM3 812 aa24.15■■□□□ 1.46
CSPG5-203ENST00000456150 TMEM63CQ9P1W3 806 aa24.15■■□□□ 1.46
CSPG5-203ENST00000456150 CASTP20810 708 aaKnown RBP24.14■■□□□ 1.46
CSPG5-203ENST00000456150 LRSAM1Q6UWE0 723 aa24.14■■□□□ 1.46
CSPG5-203ENST00000456150 COPS6Q7L5N1 327 aa24.14■■□□□ 1.46
CSPG5-203ENST00000456150 EAF2Q96CJ1 260 aaPredicted RBP24.14■■□□□ 1.46
CSPG5-203ENST00000456150 ZNF496Q96IT1 587 aaPredicted RBP24.14■■□□□ 1.46
CSPG5-203ENST00000456150 WDR17Q8IZU2 1322 aa24.14■■□□□ 1.46
CSPG5-203ENST00000456150 MYD88Q99836 296 aa24.14■■□□□ 1.45
CSPG5-203ENST00000456150 STRN4Q9NRL3 753 aa24.14■■□□□ 1.45
CSPG5-203ENST00000456150 CCDC171Q6TFL3 1326 aa24.14■■□□□ 1.45
CSPG5-203ENST00000456150 AFDNP55196 1824 aaKnown RBP24.13■■□□□ 1.45
CSPG5-203ENST00000456150 PTH1RQ03431 593 aa24.13■■□□□ 1.45
CSPG5-203ENST00000456150 VPS53Q5VIR6 699 aa24.13■■□□□ 1.45
CSPG5-203ENST00000456150 RUFY3Q7L099 469 aa24.13■■□□□ 1.45
CSPG5-203ENST00000456150 SYAP1Q96A49 352 aaPredicted RBP24.13■■□□□ 1.45
CSPG5-203ENST00000456150 RPAP1Q9BWH6 1393 aaPredicted RBP24.13■■□□□ 1.45
CSPG5-203ENST00000456150 PRIM1P49642 420 aaKnown RBP24.12■■□□□ 1.45
CSPG5-203ENST00000456150 TOM1L2Q6ZVM7 507 aa24.12■■□□□ 1.45
CSPG5-203ENST00000456150 FMNL2Q96PY5 1086 aa24.12■■□□□ 1.45
CSPG5-203ENST00000456150 ANKRD13DQ6ZTN6 518 aa24.12■■□□□ 1.45
CSPG5-203ENST00000456150 ZKSCAN1P17029 563 aaPredicted RBP24.11■■□□□ 1.45
CSPG5-203ENST00000456150 PRPF40BQ6NWY9 871 aaKnown RBP24.11■■□□□ 1.45
CSPG5-203ENST00000456150 ZSCAN31Q96LW9 406 aaPredicted RBP24.11■■□□□ 1.45
CSPG5-203ENST00000456150 CCDC8Q9H0W5 538 aaPredicted RBP24.11■■□□□ 1.45
CSPG5-203ENST00000456150 RBSNQ9H1K0 784 aa24.11■■□□□ 1.45
CSPG5-203ENST00000456150 CYP46A1Q9Y6A2 500 aa24.11■■□□□ 1.45
CSPG5-203ENST00000456150 LAMB4A4D0S4 1761 aa24.11■■□□□ 1.45
CSPG5-203ENST00000456150 PARP4Q9UKK3 1724 aaKnown RBP24.11■■□□□ 1.45
CSPG5-203ENST00000456150 JAKMIP1Q96N16 626 aaKnown RBP24.11■■□□□ 1.45
CSPG5-203ENST00000456150 SIL1Q9H173 461 aa24.11■■□□□ 1.45
CSPG5-203ENST00000456150 ANO8Q9HCE9 1232 aaPredicted RBP24.11■■□□□ 1.45
CSPG5-203ENST00000456150 ZSWIM6Q9HCJ5 1215 aa24.11■■□□□ 1.45
CSPG5-203ENST00000456150 SNRKQ9NRH2 765 aa24.11■■□□□ 1.45
CSPG5-203ENST00000456150 PDRG1Q9NUG6 133 aa24.11■■□□□ 1.45
CSPG5-203ENST00000456150 NSFL1CQ9UNZ2 370 aaKnown RBP24.11■■□□□ 1.45
CSPG5-203ENST00000456150 SMC3Q9UQE7 1217 aa24.11■■□□□ 1.45
CSPG5-203ENST00000456150 NECTIN1Q15223 517 aa24.1■■□□□ 1.45
CSPG5-203ENST00000456150 SH2B1Q9NRF2 756 aaPredicted RBP24.1■■□□□ 1.45
CSPG5-203ENST00000456150 ARFGEF2Q9Y6D5 1785 aa24.1■■□□□ 1.45
CSPG5-203ENST00000456150 COL15A1P39059 1388 aa24.1■■□□□ 1.45
CSPG5-203ENST00000456150 LRP10Q7Z4F1 713 aa24.09■■□□□ 1.45
CSPG5-203ENST00000456150 SYCE3A1L190 88 aa24.09■■□□□ 1.45
CSPG5-203ENST00000456150 CYP27B1O15528 508 aa24.09■■□□□ 1.45
CSPG5-203ENST00000456150 ZSCAN22P10073 491 aaPredicted RBP24.09■■□□□ 1.45
CSPG5-203ENST00000456150 BTG4Q9NY30 223 aa24.09■■□□□ 1.45
CSPG5-203ENST00000456150 ERBB4Q15303 1308 aa24.08■■□□□ 1.45
CSPG5-203ENST00000456150 EVA1CP58658 441 aa24.08■■□□□ 1.45
CSPG5-203ENST00000456150 NMIQ13287 307 aaPredicted RBP24.08■■□□□ 1.45
CSPG5-203ENST00000456150 TMEM87AQ8NBN3 555 aa24.08■■□□□ 1.45
CSPG5-203ENST00000456150 COPRSQ9NQ92 184 aa24.08■■□□□ 1.45
CSPG5-203ENST00000456150 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.08■■□□□ 1.45
CSPG5-203ENST00000456150 RBM8AQ9Y5S9 174 aaKnown RBP24.08■■□□□ 1.45
CSPG5-203ENST00000456150 USP16Q9Y5T5 823 aa24.08■■□□□ 1.45
CSPG5-203ENST00000456150 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.08■■□□□ 1.45
CSPG5-203ENST00000456150 TCHHQ07283 1943 aa24.08■■□□□ 1.44
CSPG5-203ENST00000456150 STX6O43752 255 aa24.07■■□□□ 1.44
CSPG5-203ENST00000456150 KCNJ4P48050 445 aa24.07■■□□□ 1.44
CSPG5-203ENST00000456150 MAP4K1Q92918 833 aa24.07■■□□□ 1.44
CSPG5-203ENST00000456150 FSD1Q9BTV5 496 aa24.07■■□□□ 1.44
CSPG5-203ENST00000456150 TLR7Q9NYK1 1049 aaKnown RBP24.07■■□□□ 1.44
CSPG5-203ENST00000456150 PHF14O94880 888 aa24.07■■□□□ 1.44
CSPG5-203ENST00000456150 ATP6V1DQ9Y5K8 247 aa24.07■■□□□ 1.44
CSPG5-203ENST00000456150 PSMA5P28066 241 aa24.06■■□□□ 1.44
CSPG5-203ENST00000456150 CABP4P57796 275 aa24.06■■□□□ 1.44
CSPG5-203ENST00000456150 ADCK5Q3MIX3 580 aa24.06■■□□□ 1.44
CSPG5-203ENST00000456150 CREB3L3Q68CJ9 461 aa24.06■■□□□ 1.44
CSPG5-203ENST00000456150 FAM227BQ96M60 508 aa24.06■■□□□ 1.44
CSPG5-203ENST00000456150 BOLA2Q9H3K6 86 aa24.06■■□□□ 1.44
CSPG5-203ENST00000456150 CPA1P15085 419 aa24.06■■□□□ 1.44
CSPG5-203ENST00000456150 EPHA10Q5JZY3 1008 aa24.06■■□□□ 1.44
CSPG5-203ENST00000456150 USP48Q86UV5 1035 aa24.06■■□□□ 1.44
CSPG5-203ENST00000456150 CERKQ8TCT0 537 aa24.06■■□□□ 1.44
CSPG5-203ENST00000456150 ADAMTS2O95450 1211 aa24.05■■□□□ 1.44
CSPG5-203ENST00000456150 SYT1P21579 422 aa24.05■■□□□ 1.44
CSPG5-203ENST00000456150 RNF20Q5VTR2 975 aa24.05■■□□□ 1.44
CSPG5-203ENST00000456150 KLHDC4Q8TBB5 520 aa24.05■■□□□ 1.44
CSPG5-203ENST00000456150 RABL6Q3YEC7 729 aaPredicted RBP24.04■■□□□ 1.44
CSPG5-203ENST00000456150 HS1BP3Q53T59 392 aa24.04■■□□□ 1.44
CSPG5-203ENST00000456150 COL14A1Q05707 1796 aaKnown RBP24.04■■□□□ 1.44
CSPG5-203ENST00000456150 CARD10Q9BWT7 1032 aa24.04■■□□□ 1.44
CSPG5-203ENST00000456150 MED23Q9ULK4 1368 aa24.03■■□□□ 1.44
CSPG5-203ENST00000456150 NUTM2BA6NNL0 878 aaPredicted RBP24.03■■□□□ 1.44
CSPG5-203ENST00000456150 NUTM2EB1AL46 878 aaPredicted RBP24.03■■□□□ 1.44
CSPG5-203ENST00000456150 NUTM2AQ8IVF1 878 aaPredicted RBP24.03■■□□□ 1.44
CSPG5-203ENST00000456150 LARP6Q9BRS8 491 aaKnown RBP24.03■■□□□ 1.44
CSPG5-203ENST00000456150 GLI3P10071 1580 aa24.03■■□□□ 1.44
CSPG5-203ENST00000456150 LARGE1O95461 756 aa24.03■■□□□ 1.44
CSPG5-203ENST00000456150 F13A1P00488 732 aa24.03■■□□□ 1.44
CSPG5-203ENST00000456150 RFX5P48382 616 aaPredicted RBP24.03■■□□□ 1.44
CSPG5-203ENST00000456150 FOXD4L6Q3SYB3 417 aaPredicted RBP24.03■■□□□ 1.44
CSPG5-203ENST00000456150 FOXD4L3Q6VB84 417 aaPredicted RBP24.03■■□□□ 1.44
CSPG5-203ENST00000456150 CCDC83Q8IWF9 413 aa24.03■■□□□ 1.44
CSPG5-203ENST00000456150 PLBD2Q8NHP8 589 aa24.03■■□□□ 1.44
CSPG5-203ENST00000456150 PDLIM2Q96JY6 352 aa24.03■■□□□ 1.44
CSPG5-203ENST00000456150 A0A0D9SFI3 127 aa24.02■■□□□ 1.44
CSPG5-203ENST00000456150 SLC27A2O14975 620 aa24.02■■□□□ 1.44
CSPG5-203ENST00000456150 ZSCAN30Q86W11 494 aa24.02■■□□□ 1.44
CSPG5-203ENST00000456150 GDPD2Q9HCC8 539 aa24.02■■□□□ 1.44
CSPG5-203ENST00000456150 RFX7Q2KHR2 1363 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms