RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 DCTN1Q14203 1278 aa17.85■□□□□ 0.45
EPCAM-204ENST00000456133 CAPNS2Q96L46 248 aa17.85■□□□□ 0.45
EPCAM-204ENST00000456133 DLG5Q8TDM6 1919 aa17.85■□□□□ 0.45
EPCAM-204ENST00000456133 EPS15P42566 896 aa17.84■□□□□ 0.45
EPCAM-204ENST00000456133 GRM1Q13255 1194 aa17.84■□□□□ 0.45
EPCAM-204ENST00000456133 CRY2Q49AN0 593 aa17.84■□□□□ 0.45
EPCAM-204ENST00000456133 NUTM1Q86Y26 1132 aa17.84■□□□□ 0.45
EPCAM-204ENST00000456133 CASP8AP2Q9UKL3 1982 aa17.84■□□□□ 0.45
EPCAM-204ENST00000456133 SCNN1DP51172 638 aa17.83■□□□□ 0.45
EPCAM-204ENST00000456133 CC2D2BQ6DHV5 1058 aa17.83■□□□□ 0.45
EPCAM-204ENST00000456133 CYP4F22Q6NT55 531 aa17.83■□□□□ 0.45
EPCAM-204ENST00000456133 CFAP53Q96M91 514 aa17.83■□□□□ 0.45
EPCAM-204ENST00000456133 CCDC85CA6NKD9 419 aa17.82■□□□□ 0.44
EPCAM-204ENST00000456133 ECE1P42892 770 aa17.82■□□□□ 0.44
EPCAM-204ENST00000456133 LARGE2Q8N3Y3 721 aa17.82■□□□□ 0.44
EPCAM-204ENST00000456133 NGEFQ8N5V2 710 aa17.82■□□□□ 0.44
EPCAM-204ENST00000456133 GPR101Q96P66 508 aaPredicted RBP17.82■□□□□ 0.44
EPCAM-204ENST00000456133 NYXQ9GZU5 481 aa17.82■□□□□ 0.44
EPCAM-204ENST00000456133 KDM3BQ7LBC6 1761 aa17.82■□□□□ 0.44
EPCAM-204ENST00000456133 TRAF5O00463 557 aa17.82■□□□□ 0.44
EPCAM-204ENST00000456133 SLC51AQ86UW1 340 aa17.82■□□□□ 0.44
EPCAM-204ENST00000456133 RPGRQ92834 1020 aaKnown RBP17.82■□□□□ 0.44
EPCAM-204ENST00000456133 BEGAINQ9BUH8 593 aa17.82■□□□□ 0.44
EPCAM-204ENST00000456133 CST9Q5W186 159 aa17.81■□□□□ 0.44
EPCAM-204ENST00000456133 CCER1Q8TC90 406 aaPredicted RBP17.81■□□□□ 0.44
EPCAM-204ENST00000456133 MIS18AQ9NYP9 233 aa17.81■□□□□ 0.44
EPCAM-204ENST00000456133 NUDCQ9Y266 331 aa17.81■□□□□ 0.44
EPCAM-204ENST00000456133 TCERG1O14776 1098 aaKnown RBP17.8■□□□□ 0.44
EPCAM-204ENST00000456133 U2AF1L5P0DN76 240 aaPredicted RBP17.8■□□□□ 0.44
EPCAM-204ENST00000456133 HOXA10P31260 410 aaPredicted RBP17.8■□□□□ 0.44
EPCAM-204ENST00000456133 U2AF1Q01081 240 aaKnown RBP eCLIP17.8■□□□□ 0.44
EPCAM-204ENST00000456133 USP50Q70EL3 339 aaPredicted RBP17.8■□□□□ 0.44
EPCAM-204ENST00000456133 TSKSQ9UJT2 592 aa17.8■□□□□ 0.44
EPCAM-204ENST00000456133 AOC2O75106 756 aa17.79■□□□□ 0.44
EPCAM-204ENST00000456133 TAF7Q15545 349 aaPredicted RBP17.79■□□□□ 0.44
EPCAM-204ENST00000456133 TLL2Q9Y6L7 1015 aa17.79■□□□□ 0.44
EPCAM-204ENST00000456133 RIC1Q4ADV7 1423 aa17.79■□□□□ 0.44
EPCAM-204ENST00000456133 MAP3K15Q6ZN16 1313 aa17.79■□□□□ 0.44
EPCAM-204ENST00000456133 ERVV-1B6SEH8 477 aa17.78■□□□□ 0.44
EPCAM-204ENST00000456133 HTATSF1O43719 755 aaKnown RBP17.78■□□□□ 0.44
EPCAM-204ENST00000456133 GPTP24298 496 aa17.78■□□□□ 0.44
EPCAM-204ENST00000456133 MLLT1Q03111 559 aaPredicted RBP17.78■□□□□ 0.44
EPCAM-204ENST00000456133 GRIPAP1Q4V328 841 aa17.78■□□□□ 0.44
EPCAM-204ENST00000456133 TTLL7Q6ZT98 887 aa17.78■□□□□ 0.44
EPCAM-204ENST00000456133 NIM1KQ8IY84 436 aa17.78■□□□□ 0.44
EPCAM-204ENST00000456133 PPEF1O14829 653 aaPredicted RBP17.77■□□□□ 0.44
EPCAM-204ENST00000456133 RBM17Q96I25 401 aaKnown RBP17.77■□□□□ 0.44
EPCAM-204ENST00000456133 CRAMP1Q96RY5 1269 aa17.77■□□□□ 0.44
EPCAM-204ENST00000456133 RRP7AQ9Y3A4 280 aaKnown RBP17.77■□□□□ 0.44
EPCAM-204ENST00000456133 UBN2Q6ZU65 1347 aa17.77■□□□□ 0.44
EPCAM-204ENST00000456133 RGS19P49795 217 aa17.77■□□□□ 0.43
EPCAM-204ENST00000456133 SUSD4Q5VX71 490 aa17.77■□□□□ 0.43
EPCAM-204ENST00000456133 KIF6Q6ZMV9 814 aa17.77■□□□□ 0.43
EPCAM-204ENST00000456133 IBTKQ9P2D0 1353 aaPredicted RBP17.76■□□□□ 0.43
EPCAM-204ENST00000456133 LAMB2P55268 1798 aa17.76■□□□□ 0.43
EPCAM-204ENST00000456133 PPIP5K2O43314 1243 aa17.76■□□□□ 0.43
EPCAM-204ENST00000456133 C3orf67Q6ZVT6 689 aa17.76■□□□□ 0.43
EPCAM-204ENST00000456133 ZBTB3Q9H5J0 574 aa17.76■□□□□ 0.43
EPCAM-204ENST00000456133 ADARB2Q9NS39 739 aaKnown RBP17.76■□□□□ 0.43
EPCAM-204ENST00000456133 MYL6BP14649 208 aa17.75■□□□□ 0.43
EPCAM-204ENST00000456133 MAP2K2P36507 400 aa17.75■□□□□ 0.43
EPCAM-204ENST00000456133 AOC3Q16853 763 aa17.75■□□□□ 0.43
EPCAM-204ENST00000456133 GPRC5DQ9NZD1 345 aa17.75■□□□□ 0.43
EPCAM-204ENST00000456133 POLR2AP24928 1970 aaKnown RBP17.74■□□□□ 0.43
EPCAM-204ENST00000456133 CELF2O95319 508 aaKnown RBP17.73■□□□□ 0.43
EPCAM-204ENST00000456133 NTSR2O95665 410 aa17.73■□□□□ 0.43
EPCAM-204ENST00000456133 ZNF34Q8IZ26 560 aa17.73■□□□□ 0.43
EPCAM-204ENST00000456133 GLIS2Q9BZE0 524 aaPredicted RBP17.73■□□□□ 0.43
EPCAM-204ENST00000456133 TAF1P21675 1872 aa17.73■□□□□ 0.43
EPCAM-204ENST00000456133 PPP2R1AP30153 589 aa17.72■□□□□ 0.43
EPCAM-204ENST00000456133 CXCL9Q07325 125 aa17.72■□□□□ 0.43
EPCAM-204ENST00000456133 SAPCD2Q86UD0 394 aa17.72■□□□□ 0.43
EPCAM-204ENST00000456133 CFAP44Q96MT7 982 aa17.72■□□□□ 0.43
EPCAM-204ENST00000456133 ANKRD36CQ5JPF3 1778 aa17.72■□□□□ 0.43
EPCAM-204ENST00000456133 GMPSP49915 693 aaPredicted RBP17.72■□□□□ 0.43
EPCAM-204ENST00000456133 EIF4A1P60842 406 aaKnown RBP17.72■□□□□ 0.43
EPCAM-204ENST00000456133 PNISRQ8TF01 805 aaKnown RBP17.72■□□□□ 0.43
EPCAM-204ENST00000456133 MCOLN1Q9GZU1 580 aa17.72■□□□□ 0.43
EPCAM-204ENST00000456133 ZNRF3Q9ULT6 936 aa17.72■□□□□ 0.43
EPCAM-204ENST00000456133 ATP6V0A2Q9Y487 856 aa17.72■□□□□ 0.43
EPCAM-204ENST00000456133 TNRC18O15417 2968 aaPredicted RBP17.71■□□□□ 0.43
EPCAM-204ENST00000456133 GIGYF2Q6Y7W6 1299 aaKnown RBP17.71■□□□□ 0.43
EPCAM-204ENST00000456133 NLRP3Q96P20 1036 aa17.71■□□□□ 0.43
EPCAM-204ENST00000456133 TMX4Q9H1E5 349 aaPredicted RBP17.71■□□□□ 0.43
EPCAM-204ENST00000456133 VPS33BQ9H267 617 aa17.71■□□□□ 0.43
EPCAM-204ENST00000456133 CA12O43570 354 aa17.7■□□□□ 0.42
EPCAM-204ENST00000456133 PPP1R42Q7Z4L9 355 aa17.7■□□□□ 0.42
EPCAM-204ENST00000456133 ZNF408Q9H9D4 720 aa17.7■□□□□ 0.42
EPCAM-204ENST00000456133 ABCC4O15439 1325 aa17.69■□□□□ 0.42
EPCAM-204ENST00000456133 SUPT20HQ8NEM7 779 aa17.69■□□□□ 0.42
EPCAM-204ENST00000456133 HHIPL1Q96JK4 782 aa17.69■□□□□ 0.42
EPCAM-204ENST00000456133 PGAP2Q9UHJ9 254 aa17.69■□□□□ 0.42
EPCAM-204ENST00000456133 BRPF1P55201 1214 aaPredicted RBP17.68■□□□□ 0.42
EPCAM-204ENST00000456133 PARP10Q53GL7 1025 aa17.68■□□□□ 0.42
EPCAM-204ENST00000456133 CIAPIN1Q6FI81 312 aa17.68■□□□□ 0.42
EPCAM-204ENST00000456133 RTFDC1Q9BY42 306 aaPredicted RBP17.68■□□□□ 0.42
EPCAM-204ENST00000456133 RAD17O75943 681 aa17.67■□□□□ 0.42
EPCAM-204ENST00000456133 HIRAP54198 1017 aaPredicted RBP17.67■□□□□ 0.42
EPCAM-204ENST00000456133 DGKZQ13574 1117 aa17.67■□□□□ 0.42
EPCAM-204ENST00000456133 THUMPD2Q9BTF0 503 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms