RNA–Protein interactions for RNA: ENST00000456128.5

TOM1-212, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 1,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-212ENST00000456128 STK31Q9BXU1 1019 aa20.2■□□□□ 0.82
TOM1-212ENST00000456128 ANKRD36CQ5JPF3 1778 aa20.2■□□□□ 0.82
TOM1-212ENST00000456128 TNRC6CQ9HCJ0 1690 aaKnown RBP20.19■□□□□ 0.82
TOM1-212ENST00000456128 ALDH1B1P30837 517 aa20.19■□□□□ 0.82
TOM1-212ENST00000456128 SLC10A5Q5PT55 438 aa20.19■□□□□ 0.82
TOM1-212ENST00000456128 C9orf131Q5VYM1 1079 aa20.19■□□□□ 0.82
TOM1-212ENST00000456128 DIEXFQ68CQ4 756 aaKnown RBP20.19■□□□□ 0.82
TOM1-212ENST00000456128 RIC3Q7Z5B4 369 aa20.19■□□□□ 0.82
TOM1-212ENST00000456128 ISCA1Q9BUE6 129 aa20.19■□□□□ 0.82
TOM1-212ENST00000456128 DDX58O95786 925 aaKnown RBP20.18■□□□□ 0.82
TOM1-212ENST00000456128 EXOSC9Q06265 439 aaKnown RBP20.18■□□□□ 0.82
TOM1-212ENST00000456128 TRIM28Q13263 835 aaKnown RBP20.18■□□□□ 0.82
TOM1-212ENST00000456128 ZNF219Q9P2Y4 722 aaPredicted RBP20.18■□□□□ 0.82
TOM1-212ENST00000456128 TRMT112Q9UI30 125 aaKnown RBP20.18■□□□□ 0.82
TOM1-212ENST00000456128 NFKBIEO00221 500 aa20.17■□□□□ 0.82
TOM1-212ENST00000456128 RASSF7Q02833 373 aa20.17■□□□□ 0.82
TOM1-212ENST00000456128 SOGA3Q5TF21 947 aa20.17■□□□□ 0.82
TOM1-212ENST00000456128 NLRP3Q96P20 1036 aa20.17■□□□□ 0.82
TOM1-212ENST00000456128 RNF181Q9P0P0 153 aa20.17■□□□□ 0.82
TOM1-212ENST00000456128 ATP5J2-PTCD1G3V325 749 aa20.16■□□□□ 0.82
TOM1-212ENST00000456128 TCERG1O14776 1098 aaKnown RBP20.16■□□□□ 0.82
TOM1-212ENST00000456128 VAMP4O75379 141 aa20.16■□□□□ 0.82
TOM1-212ENST00000456128 LMNB1P20700 586 aa20.16■□□□□ 0.82
TOM1-212ENST00000456128 HOXA10P31260 410 aaPredicted RBP20.16■□□□□ 0.82
TOM1-212ENST00000456128 C7orf43Q8WVR3 580 aa20.16■□□□□ 0.82
TOM1-212ENST00000456128 RPGRQ92834 1020 aaKnown RBP20.16■□□□□ 0.82
TOM1-212ENST00000456128 SH3TC1Q8TE82 1336 aa20.16■□□□□ 0.82
TOM1-212ENST00000456128 ARFGEF2Q9Y6D5 1785 aa20.16■□□□□ 0.82
TOM1-212ENST00000456128 SLX4Q8IY92 1834 aa20.16■□□□□ 0.82
TOM1-212ENST00000456128 SLC4A2P04920 1241 aa20.15■□□□□ 0.82
TOM1-212ENST00000456128 C3orf67Q6ZVT6 689 aa20.15■□□□□ 0.82
TOM1-212ENST00000456128 HCLS1P14317 486 aaPredicted RBP20.14■□□□□ 0.81
TOM1-212ENST00000456128 SYNE4Q8N205 404 aa20.14■□□□□ 0.81
TOM1-212ENST00000456128 RBM17Q96I25 401 aaKnown RBP20.14■□□□□ 0.81
TOM1-212ENST00000456128 GPBP1L1Q9HC44 474 aaPredicted RBP20.14■□□□□ 0.81
TOM1-212ENST00000456128 LTBP3Q9NS15 1303 aa20.13■□□□□ 0.81
TOM1-212ENST00000456128 PRELPP51888 382 aa20.13■□□□□ 0.81
TOM1-212ENST00000456128 CCDC93Q567U6 631 aa20.13■□□□□ 0.81
TOM1-212ENST00000456128 KSR2Q6VAB6 950 aa20.13■□□□□ 0.81
TOM1-212ENST00000456128 ZNF526Q8TF50 670 aaPredicted RBP20.13■□□□□ 0.81
TOM1-212ENST00000456128 CRAMP1Q96RY5 1269 aa20.13■□□□□ 0.81
TOM1-212ENST00000456128 MYD88Q99836 296 aa20.13■□□□□ 0.81
TOM1-212ENST00000456128 METTL22Q9BUU2 404 aaPredicted RBP20.13■□□□□ 0.81
TOM1-212ENST00000456128 ZC3H4Q9UPT8 1303 aaKnown RBP20.12■□□□□ 0.81
TOM1-212ENST00000456128 PI4KAP2A4QPH2 592 aa20.12■□□□□ 0.81
TOM1-212ENST00000456128 G2E3Q7L622 706 aa20.12■□□□□ 0.81
TOM1-212ENST00000456128 PI4KAP1Q8N8J0 262 aa20.12■□□□□ 0.81
TOM1-212ENST00000456128 ZNF428Q96B54 188 aa20.12■□□□□ 0.81
TOM1-212ENST00000456128 FAM89AQ96GI7 184 aa20.12■□□□□ 0.81
TOM1-212ENST00000456128 TAOK3Q9H2K8 898 aa20.12■□□□□ 0.81
TOM1-212ENST00000456128 MAP3K2Q9Y2U5 619 aa20.12■□□□□ 0.81
TOM1-212ENST00000456128 E9PSI1 815 aa20.11■□□□□ 0.81
TOM1-212ENST00000456128 MIER1Q8N108 512 aa20.11■□□□□ 0.81
TOM1-212ENST00000456128 CCDC191Q8NCU4 936 aa20.11■□□□□ 0.81
TOM1-212ENST00000456128 CACNA1SQ13698 1873 aa20.11■□□□□ 0.81
TOM1-212ENST00000456128 SBF1O95248 1867 aa20.1■□□□□ 0.81
TOM1-212ENST00000456128 FER1L6Q2WGJ9 1857 aa20.1■□□□□ 0.81
TOM1-212ENST00000456128 FLIIQ13045 1269 aa20.1■□□□□ 0.81
TOM1-212ENST00000456128 RTKN2Q8IZC4 609 aa20.1■□□□□ 0.81
TOM1-212ENST00000456128 OLFM4Q6UX06 510 aa20.09■□□□□ 0.81
TOM1-212ENST00000456128 ZBTB38Q8NAP3 1195 aaPredicted RBP20.09■□□□□ 0.81
TOM1-212ENST00000456128 CWC25Q9NXE8 425 aaPredicted RBP20.09■□□□□ 0.81
TOM1-212ENST00000456128 NEXNQ0ZGT2 675 aa20.08■□□□□ 0.81
TOM1-212ENST00000456128 RTL5Q5HYW3 569 aaPredicted RBP20.08■□□□□ 0.81
TOM1-212ENST00000456128 CC2D2BQ6DHV5 1058 aa20.08■□□□□ 0.81
TOM1-212ENST00000456128 ABCC4O15439 1325 aa20.07■□□□□ 0.8
TOM1-212ENST00000456128 IRS4O14654 1257 aaPredicted RBP20.07■□□□□ 0.8
TOM1-212ENST00000456128 PPEF1O14829 653 aaPredicted RBP20.07■□□□□ 0.8
TOM1-212ENST00000456128 IGKV5-2P06315 115 aa20.07■□□□□ 0.8
TOM1-212ENST00000456128 HSP90B1P14625 803 aaKnown RBP20.07■□□□□ 0.8
TOM1-212ENST00000456128 FKBP4Q02790 459 aaKnown RBP eCLIP20.07■□□□□ 0.8
TOM1-212ENST00000456128 SLFN5Q08AF3 891 aa20.07■□□□□ 0.8
TOM1-212ENST00000456128 FKBP5Q13451 457 aaPredicted RBP20.07■□□□□ 0.8
TOM1-212ENST00000456128 DDX46Q7L014 1031 aaKnown RBP20.07■□□□□ 0.8
TOM1-212ENST00000456128 PCCAP05165 728 aaPredicted RBP20.06■□□□□ 0.8
TOM1-212ENST00000456128 SF3B3Q15393 1217 aaKnown RBP20.06■□□□□ 0.8
TOM1-212ENST00000456128 GRIPAP1Q4V328 841 aa20.06■□□□□ 0.8
TOM1-212ENST00000456128 SNED1Q8TER0 1413 aa20.06■□□□□ 0.8
TOM1-212ENST00000456128 KDM2BQ8NHM5 1336 aa20.05■□□□□ 0.8
TOM1-212ENST00000456128 BBOX1O75936 387 aa20.05■□□□□ 0.8
TOM1-212ENST00000456128 PSMD1Q99460 953 aa20.05■□□□□ 0.8
TOM1-212ENST00000456128 DDX60Q8IY21 1712 aaKnown RBP20.05■□□□□ 0.8
TOM1-212ENST00000456128 LAMB2P55268 1798 aa20.04■□□□□ 0.8
TOM1-212ENST00000456128 GRAPQ13588 217 aa20.04■□□□□ 0.8
TOM1-212ENST00000456128 GRAPLQ8TC17 118 aaPredicted RBP20.04■□□□□ 0.8
TOM1-212ENST00000456128 DNAAF4Q8WXU2 420 aa20.04■□□□□ 0.8
TOM1-212ENST00000456128 ATP6V0A2Q9Y487 856 aa20.04■□□□□ 0.8
TOM1-212ENST00000456128 NEURL1BA8MQ27 555 aa20.03■□□□□ 0.8
TOM1-212ENST00000456128 CWF19L2Q2TBE0 894 aaKnown RBP20.03■□□□□ 0.8
TOM1-212ENST00000456128 CDCA7LQ96GN5 454 aa20.03■□□□□ 0.8
TOM1-212ENST00000456128 TMX4Q9H1E5 349 aaPredicted RBP20.03■□□□□ 0.8
TOM1-212ENST00000456128 ZNF277Q9NRM2 450 aaPredicted RBP20.03■□□□□ 0.8
TOM1-212ENST00000456128 CEP350Q5VT06 3117 aa20.02■□□□□ 0.8
TOM1-212ENST00000456128 KIF3CO14782 793 aa20.02■□□□□ 0.8
TOM1-212ENST00000456128 C1QTNF8P60827 252 aa20.02■□□□□ 0.8
TOM1-212ENST00000456128 TRMT2AQ8IZ69 625 aaKnown RBP20.02■□□□□ 0.8
TOM1-212ENST00000456128 NMRK2Q9NPI5 230 aa20.02■□□□□ 0.8
TOM1-212ENST00000456128 CACNA1FO60840 1977 aa20.02■□□□□ 0.8
TOM1-212ENST00000456128 TIAM2Q8IVF5 1701 aa20.02■□□□□ 0.79
TOM1-212ENST00000456128 CDHR2Q9BYE9 1310 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms