RNA–Protein interactions for RNA: ENST00000455580.5

PPP1CB-208, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 3

Gene PPP1CB, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-208ENST00000455580 HOXA10P31260 410 aaPredicted RBP31.19■■■□□ 2.58
PPP1CB-208ENST00000455580 TCIRG1Q13488 830 aa31.19■■■□□ 2.58
PPP1CB-208ENST00000455580 UTP14AQ9BVJ6 771 aaKnown RBP31.19■■■□□ 2.58
PPP1CB-208ENST00000455580 CACNA1SQ13698 1873 aa31.18■■■□□ 2.58
PPP1CB-208ENST00000455580 SLC10A5Q5PT55 438 aa31.18■■■□□ 2.58
PPP1CB-208ENST00000455580 TNRC6CQ9HCJ0 1690 aaKnown RBP31.17■■■□□ 2.58
PPP1CB-208ENST00000455580 OLFM4Q6UX06 510 aa31.16■■■□□ 2.58
PPP1CB-208ENST00000455580 NLRP10Q86W26 655 aa31.16■■■□□ 2.58
PPP1CB-208ENST00000455580 C16orf71Q8IYS4 520 aaPredicted RBP31.16■■■□□ 2.58
PPP1CB-208ENST00000455580 RTKN2Q8IZC4 609 aa31.16■■■□□ 2.58
PPP1CB-208ENST00000455580 RBM46Q8TBY0 533 aaKnown RBP31.16■■■□□ 2.58
PPP1CB-208ENST00000455580 RPGRQ92834 1020 aaKnown RBP31.16■■■□□ 2.58
PPP1CB-208ENST00000455580 MRS2Q9HD23 443 aa31.16■■■□□ 2.58
PPP1CB-208ENST00000455580 DPY19L2Q6NUT2 758 aa31.15■■■□□ 2.58
PPP1CB-208ENST00000455580 ANKRD13DQ6ZTN6 518 aa31.15■■■□□ 2.58
PPP1CB-208ENST00000455580 PLBD2Q8NHP8 589 aa31.15■■■□□ 2.58
PPP1CB-208ENST00000455580 NLRP3Q96P20 1036 aa31.15■■■□□ 2.58
PPP1CB-208ENST00000455580 HYPKQ9NX55 129 aa31.15■■■□□ 2.58
PPP1CB-208ENST00000455580 FKBP4Q02790 459 aaKnown RBP eCLIP31.14■■■□□ 2.582e-8■■■■■ 37.1
PPP1CB-208ENST00000455580 CCDC27Q2M243 656 aa31.14■■■□□ 2.58
PPP1CB-208ENST00000455580 C3orf67Q6ZVT6 689 aa31.14■■■□□ 2.58
PPP1CB-208ENST00000455580 RBM17Q96I25 401 aaKnown RBP31.14■■■□□ 2.58
PPP1CB-208ENST00000455580 RNF123Q5XPI4 1314 aa31.14■■■□□ 2.58
PPP1CB-208ENST00000455580 ELL2O00472 640 aaPredicted RBP31.13■■■□□ 2.57
PPP1CB-208ENST00000455580 CRAMP1Q96RY5 1269 aa31.13■■■□□ 2.57
PPP1CB-208ENST00000455580 VEGFAP15692 232 aaPredicted RBP31.12■■■□□ 2.57
PPP1CB-208ENST00000455580 C8orf58Q8NAV2 365 aa31.12■■■□□ 2.57
PPP1CB-208ENST00000455580 DICER1Q9UPY3 1922 aaKnown RBP31.12■■■□□ 2.57
PPP1CB-208ENST00000455580 TIAM2Q8IVF5 1701 aa31.11■■■□□ 2.57
PPP1CB-208ENST00000455580 NCBP3Q53F19 620 aaKnown RBP31.1■■■□□ 2.57
PPP1CB-208ENST00000455580 CC2D2BQ6DHV5 1058 aa31.1■■■□□ 2.57
PPP1CB-208ENST00000455580 WWC1Q8IX03 1113 aa31.1■■■□□ 2.57
PPP1CB-208ENST00000455580 TRMT112Q9UI30 125 aaKnown RBP31.1■■■□□ 2.57
PPP1CB-208ENST00000455580 POTECB2RU33 542 aa31.09■■■□□ 2.57
PPP1CB-208ENST00000455580 SYNE4Q8N205 404 aa31.08■■■□□ 2.57
PPP1CB-208ENST00000455580 ISCA1Q9BUE6 129 aa31.08■■■□□ 2.57
PPP1CB-208ENST00000455580 ZNF277Q9NRM2 450 aaPredicted RBP31.08■■■□□ 2.57
PPP1CB-208ENST00000455580 FSTL1Q12841 308 aa31.07■■■□□ 2.56
PPP1CB-208ENST00000455580 ANKRD36CQ5JPF3 1778 aa31.07■■■□□ 2.56
PPP1CB-208ENST00000455580 SNED1Q8TER0 1413 aa31.07■■■□□ 2.56
PPP1CB-208ENST00000455580 SH3TC1Q8TE82 1336 aa31.06■■■□□ 2.56
PPP1CB-208ENST00000455580 PSMD1Q99460 953 aa31.06■■■□□ 2.56
PPP1CB-208ENST00000455580 PHAXQ9H814 394 aaKnown RBP31.06■■■□□ 2.56
PPP1CB-208ENST00000455580 HCLS1P14317 486 aaPredicted RBP31.05■■■□□ 2.56
PPP1CB-208ENST00000455580 GRIPAP1Q4V328 841 aa31.05■■■□□ 2.56
PPP1CB-208ENST00000455580 CHMP4AQ9BY43 222 aa31.05■■■□□ 2.56
PPP1CB-208ENST00000455580 CEP350Q5VT06 3117 aa31.04■■■□□ 2.56
PPP1CB-208ENST00000455580 DDNO94850 711 aaPredicted RBP31.04■■■□□ 2.56
PPP1CB-208ENST00000455580 TSPYL6Q8N831 410 aa31.04■■■□□ 2.56
PPP1CB-208ENST00000455580 ATP5J2-PTCD1G3V325 749 aa31.03■■■□□ 2.56
PPP1CB-208ENST00000455580 PPEF1O14829 653 aaPredicted RBP31.03■■■□□ 2.56
PPP1CB-208ENST00000455580 IARSP41252 1262 aaKnown RBP31.03■■■□□ 2.56
PPP1CB-208ENST00000455580 APLP1P51693 650 aa31.03■■■□□ 2.56
PPP1CB-208ENST00000455580 TRIM28Q13263 835 aaKnown RBP31.03■■■□□ 2.56
PPP1CB-208ENST00000455580 TSR2Q969E8 191 aaKnown RBP31.03■■■□□ 2.56
PPP1CB-208ENST00000455580 WDR90Q96KV7 1748 aa31.02■■■□□ 2.56
PPP1CB-208ENST00000455580 CCDC30Q5VVM6 783 aa31.02■■■□□ 2.56
PPP1CB-208ENST00000455580 IL16Q14005 1332 aa31.01■■■□□ 2.56
PPP1CB-208ENST00000455580 TCERG1O14776 1098 aaKnown RBP31.01■■■□□ 2.55
PPP1CB-208ENST00000455580 RIC3Q7Z5B4 369 aa31.01■■■□□ 2.55
PPP1CB-208ENST00000455580 SMC1BQ8NDV3 1235 aa31.01■■■□□ 2.55
PPP1CB-208ENST00000455580 ZNF428Q96B54 188 aa31.01■■■□□ 2.55
PPP1CB-208ENST00000455580 ABCC4O15439 1325 aa31■■■□□ 2.55
PPP1CB-208ENST00000455580 GOLGA2Q08379 1002 aa31■■■□□ 2.55
PPP1CB-208ENST00000455580 BBOX1O75936 387 aa30.99■■■□□ 2.55
PPP1CB-208ENST00000455580 SLC51AQ86UW1 340 aa30.99■■■□□ 2.55
PPP1CB-208ENST00000455580 FAM89AQ96GI7 184 aa30.99■■■□□ 2.55
PPP1CB-208ENST00000455580 ATP6V0A2Q9Y487 856 aa30.99■■■□□ 2.55
PPP1CB-208ENST00000455580 FZD9O00144 591 aa30.98■■■□□ 2.55
PPP1CB-208ENST00000455580 DDX46Q7L014 1031 aaKnown RBP30.97■■■□□ 2.55
PPP1CB-208ENST00000455580 L3MBTL3Q96JM7 780 aaPredicted RBP30.96■■■□□ 2.55
PPP1CB-208ENST00000455580 TMX4Q9H1E5 349 aaPredicted RBP30.96■■■□□ 2.55
PPP1CB-208ENST00000455580 JDP2Q8WYK2 163 aa30.95■■■□□ 2.55
PPP1CB-208ENST00000455580 ZNF541Q9H0D2 1346 aa30.95■■■□□ 2.54
PPP1CB-208ENST00000455580 SF3B3Q15393 1217 aaKnown RBP30.94■■■□□ 2.54
PPP1CB-208ENST00000455580 WDR63Q8IWG1 891 aa30.94■■■□□ 2.54
PPP1CB-208ENST00000455580 SP8Q8IXZ3 490 aa30.94■■■□□ 2.54
PPP1CB-208ENST00000455580 SALL2Q9Y467 1007 aaPredicted RBP30.94■■■□□ 2.54
PPP1CB-208ENST00000455580 DDX58O95786 925 aaKnown RBP30.93■■■□□ 2.54
PPP1CB-208ENST00000455580 GRAPQ13588 217 aa30.93■■■□□ 2.54
PPP1CB-208ENST00000455580 TWISTNBQ3B726 338 aaPredicted RBP30.93■■■□□ 2.54
PPP1CB-208ENST00000455580 GRAPLQ8TC17 118 aaPredicted RBP30.93■■■□□ 2.54
PPP1CB-208ENST00000455580 MYD88Q99836 296 aa30.93■■■□□ 2.54
PPP1CB-208ENST00000455580 LAMB2P55268 1798 aa30.92■■■□□ 2.54
PPP1CB-208ENST00000455580 FAM9BQ8IZU0 186 aa30.92■■■□□ 2.54
PPP1CB-208ENST00000455580 IQCA1LA6NCM1 817 aa30.91■■■□□ 2.54
PPP1CB-208ENST00000455580 RTL5Q5HYW3 569 aaPredicted RBP30.91■■■□□ 2.54
PPP1CB-208ENST00000455580 DNAJC5GQ8N7S2 189 aa30.91■■■□□ 2.54
PPP1CB-208ENST00000455580 ZBTB38Q8NAP3 1195 aaPredicted RBP30.91■■■□□ 2.54
PPP1CB-208ENST00000455580 METTL22Q9BUU2 404 aaPredicted RBP30.91■■■□□ 2.54
PPP1CB-208ENST00000455580 VPS33BQ9H267 617 aa30.91■■■□□ 2.54
PPP1CB-208ENST00000455580 IRS4O14654 1257 aaPredicted RBP30.9■■■□□ 2.54
PPP1CB-208ENST00000455580 LARGE2Q8N3Y3 721 aa30.9■■■□□ 2.54
PPP1CB-208ENST00000455580 CCDC191Q8NCU4 936 aa30.9■■■□□ 2.54
PPP1CB-208ENST00000455580 STK31Q9BXU1 1019 aa30.9■■■□□ 2.54
PPP1CB-208ENST00000455580 RTFDC1Q9BY42 306 aaPredicted RBP30.9■■■□□ 2.54
PPP1CB-208ENST00000455580 KSR2Q6VAB6 950 aa30.88■■■□□ 2.53
PPP1CB-208ENST00000455580 TMC4Q7Z404 712 aa30.88■■■□□ 2.53
PPP1CB-208ENST00000455580 GPC2Q8N158 579 aa30.88■■■□□ 2.53
PPP1CB-208ENST00000455580 COL4A5P29400 1685 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms