RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 EDC3Q96F86 508 aaKnown RBP14.71□□□□□ -0.05
SEMA4D-213ENST00000455551 SMC3Q9UQE7 1217 aa14.71□□□□□ -0.05
SEMA4D-213ENST00000455551 UTYO14607 1347 aa14.71□□□□□ -0.06
SEMA4D-213ENST00000455551 CCDC171Q6TFL3 1326 aa14.71□□□□□ -0.06
SEMA4D-213ENST00000455551 ATP5J2-PTCD1G3V325 749 aa14.7□□□□□ -0.06
SEMA4D-213ENST00000455551 PTCD1O75127 700 aaKnown RBP14.7□□□□□ -0.06
SEMA4D-213ENST00000455551 COL9A3Q14050 684 aaPredicted RBP14.7□□□□□ -0.06
SEMA4D-213ENST00000455551 IFNL2Q8IZJ0 200 aa14.7□□□□□ -0.06
SEMA4D-213ENST00000455551 CNPY2Q9Y2B0 182 aa14.7□□□□□ -0.06
SEMA4D-213ENST00000455551 RBM8AQ9Y5S9 174 aaKnown RBP14.7□□□□□ -0.06
SEMA4D-213ENST00000455551 CRYBG1Q9Y4K1 1723 aa14.7□□□□□ -0.06
SEMA4D-213ENST00000455551 CYP27B1O15528 508 aa14.7□□□□□ -0.06
SEMA4D-213ENST00000455551 A0A0D9SFI3 127 aa14.7□□□□□ -0.06
SEMA4D-213ENST00000455551 SYT1P21579 422 aa14.7□□□□□ -0.06
SEMA4D-213ENST00000455551 METTL22Q9BUU2 404 aaPredicted RBP14.7□□□□□ -0.06
SEMA4D-213ENST00000455551 NDUFB9Q9Y6M9 179 aa14.7□□□□□ -0.06
SEMA4D-213ENST00000455551 ANKRD13DQ6ZTN6 518 aa14.69□□□□□ -0.06
SEMA4D-213ENST00000455551 UBE3BQ7Z3V4 1068 aa14.69□□□□□ -0.06
SEMA4D-213ENST00000455551 TCEANC2Q96MN5 208 aa14.69□□□□□ -0.06
SEMA4D-213ENST00000455551 CCDC9Q9Y3X0 531 aaKnown RBP14.69□□□□□ -0.06
SEMA4D-213ENST00000455551 TMEM94Q12767 1356 aa14.69□□□□□ -0.06
SEMA4D-213ENST00000455551 CYP46A1Q9Y6A2 500 aa14.69□□□□□ -0.06
SEMA4D-213ENST00000455551 STX6O43752 255 aa14.69□□□□□ -0.06
SEMA4D-213ENST00000455551 NECAB1Q8N987 351 aa14.69□□□□□ -0.06
SEMA4D-213ENST00000455551 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.69□□□□□ -0.06
SEMA4D-213ENST00000455551 ZSCAN22P10073 491 aaPredicted RBP14.68□□□□□ -0.06
SEMA4D-213ENST00000455551 CREB3L3Q68CJ9 461 aa14.68□□□□□ -0.06
SEMA4D-213ENST00000455551 SNRPA1P09661 255 aaKnown RBP14.68□□□□□ -0.06
SEMA4D-213ENST00000455551 ZKSCAN1P17029 563 aaPredicted RBP14.68□□□□□ -0.06
SEMA4D-213ENST00000455551 KIF1AQ12756 1690 aa14.68□□□□□ -0.06
SEMA4D-213ENST00000455551 FIBPO43427 364 aa14.68□□□□□ -0.06
SEMA4D-213ENST00000455551 GJB2P29033 226 aa14.68□□□□□ -0.06
SEMA4D-213ENST00000455551 NECTIN1Q15223 517 aa14.68□□□□□ -0.06
SEMA4D-213ENST00000455551 TAF6LQ9Y6J9 622 aa14.67□□□□□ -0.06
SEMA4D-213ENST00000455551 MST1RQ04912 1400 aa14.67□□□□□ -0.06
SEMA4D-213ENST00000455551 SCN11AQ9UI33 1791 aa14.67□□□□□ -0.06
SEMA4D-213ENST00000455551 ALS2Q96Q42 1657 aa14.67□□□□□ -0.06
SEMA4D-213ENST00000455551 CABP4P57796 275 aa14.67□□□□□ -0.06
SEMA4D-213ENST00000455551 VPS53Q5VIR6 699 aa14.67□□□□□ -0.06
SEMA4D-213ENST00000455551 ZSWIM6Q9HCJ5 1215 aa14.67□□□□□ -0.06
SEMA4D-213ENST00000455551 ADAMTS7Q9UKP4 1686 aa14.66□□□□□ -0.06
SEMA4D-213ENST00000455551 ME3Q16798 604 aa14.66□□□□□ -0.06
SEMA4D-213ENST00000455551 ZNF589Q86UQ0 364 aaPredicted RBP14.66□□□□□ -0.06
SEMA4D-213ENST00000455551 DCAF5Q96JK2 942 aa14.66□□□□□ -0.06
SEMA4D-213ENST00000455551 FMNL2Q96PY5 1086 aa14.66□□□□□ -0.06
SEMA4D-213ENST00000455551 VPS37CA5D8V6 355 aaPredicted RBP14.66□□□□□ -0.06
SEMA4D-213ENST00000455551 CHGBP05060 677 aa14.66□□□□□ -0.06
SEMA4D-213ENST00000455551 TFCP2Q12800 502 aa14.66□□□□□ -0.06
SEMA4D-213ENST00000455551 CHMP3Q9Y3E7 222 aa14.66□□□□□ -0.06
SEMA4D-213ENST00000455551 A0A087WZG4 1122 aa14.65□□□□□ -0.06
SEMA4D-213ENST00000455551 SLC27A2O14975 620 aa14.65□□□□□ -0.06
SEMA4D-213ENST00000455551 F13A1P00488 732 aa14.65□□□□□ -0.06
SEMA4D-213ENST00000455551 ST3GAL1Q11201 340 aa14.65□□□□□ -0.06
SEMA4D-213ENST00000455551 LRP10Q7Z4F1 713 aa14.65□□□□□ -0.06
SEMA4D-213ENST00000455551 ZSCAN30Q86W11 494 aa14.65□□□□□ -0.06
SEMA4D-213ENST00000455551 SYAP1Q96A49 352 aaPredicted RBP14.65□□□□□ -0.06
SEMA4D-213ENST00000455551 MAP4K1Q92918 833 aa14.65□□□□□ -0.06
SEMA4D-213ENST00000455551 TSPY26PQ9H489 355 aa14.65□□□□□ -0.06
SEMA4D-213ENST00000455551 DBNLQ9UJU6 430 aaKnown RBP14.65□□□□□ -0.06
SEMA4D-213ENST00000455551 HIP1O00291 1037 aa14.65□□□□□ -0.06
SEMA4D-213ENST00000455551 DNAJC2Q99543 621 aaKnown RBP14.65□□□□□ -0.06
SEMA4D-213ENST00000455551 MSNP26038 577 aaKnown RBP14.64□□□□□ -0.07
SEMA4D-213ENST00000455551 TPCN1Q9ULQ1 816 aa14.64□□□□□ -0.07
SEMA4D-213ENST00000455551 PTPN12Q05209 780 aaKnown RBP14.64□□□□□ -0.07
SEMA4D-213ENST00000455551 TM6SF1Q9BZW5 370 aa14.64□□□□□ -0.07
SEMA4D-213ENST00000455551 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.64□□□□□ -0.07
SEMA4D-213ENST00000455551 DNM1Q05193 864 aaKnown RBP14.63□□□□□ -0.07
SEMA4D-213ENST00000455551 TNNI3KQ59H18 835 aa14.63□□□□□ -0.07
SEMA4D-213ENST00000455551 FPGT-TNNI3KV9GXZ4 949 aa14.63□□□□□ -0.07
SEMA4D-213ENST00000455551 RFX5P48382 616 aaPredicted RBP14.63□□□□□ -0.07
SEMA4D-213ENST00000455551 KCNB2Q92953 911 aa14.63□□□□□ -0.07
SEMA4D-213ENST00000455551 CCDC129Q6ZRS4 1044 aa14.63□□□□□ -0.07
SEMA4D-213ENST00000455551 PDLIM2Q96JY6 352 aa14.63□□□□□ -0.07
SEMA4D-213ENST00000455551 ZSCAN31Q96LW9 406 aaPredicted RBP14.63□□□□□ -0.07
SEMA4D-213ENST00000455551 DBNDD2Q9BQY9 259 aa14.63□□□□□ -0.07
SEMA4D-213ENST00000455551 COPRSQ9NQ92 184 aa14.63□□□□□ -0.07
SEMA4D-213ENST00000455551 SH2B1Q9NRF2 756 aaPredicted RBP14.63□□□□□ -0.07
SEMA4D-213ENST00000455551 MTMR6Q9Y217 621 aa14.63□□□□□ -0.07
SEMA4D-213ENST00000455551 STK3Q13188 491 aa14.62□□□□□ -0.07
SEMA4D-213ENST00000455551 BLOC1S2Q6QNY1 142 aa14.62□□□□□ -0.07
SEMA4D-213ENST00000455551 FERMT3Q86UX7 667 aa14.62□□□□□ -0.07
SEMA4D-213ENST00000455551 LMBR1LQ6UX01 489 aa14.62□□□□□ -0.07
SEMA4D-213ENST00000455551 LMTK3Q96Q04 1460 aa14.61□□□□□ -0.07
SEMA4D-213ENST00000455551 TNS3Q68CZ2 1445 aa14.61□□□□□ -0.07
SEMA4D-213ENST00000455551 DDX46Q7L014 1031 aaKnown RBP14.61□□□□□ -0.07
SEMA4D-213ENST00000455551 SEC62Q99442 399 aaKnown RBP14.61□□□□□ -0.07
SEMA4D-213ENST00000455551 MED23Q9ULK4 1368 aa14.61□□□□□ -0.07
SEMA4D-213ENST00000455551 PSMA5P28066 241 aa14.61□□□□□ -0.07
SEMA4D-213ENST00000455551 RNF20Q5VTR2 975 aa14.61□□□□□ -0.07
SEMA4D-213ENST00000455551 COL18A1P39060 1754 aa14.61□□□□□ -0.07
SEMA4D-213ENST00000455551 AFDNP55196 1824 aaKnown RBP14.61□□□□□ -0.07
SEMA4D-213ENST00000455551 PHF14O94880 888 aa14.6□□□□□ -0.07
SEMA4D-213ENST00000455551 TTLL7Q6ZT98 887 aa14.6□□□□□ -0.07
SEMA4D-213ENST00000455551 MPNDQ8N594 471 aa14.6□□□□□ -0.07
SEMA4D-213ENST00000455551 TMEM87AQ8NBN3 555 aa14.6□□□□□ -0.07
SEMA4D-213ENST00000455551 NBPF26B4DH59 902 aa14.6□□□□□ -0.07
SEMA4D-213ENST00000455551 NBPF14Q5TI25 921 aa14.6□□□□□ -0.07
SEMA4D-213ENST00000455551 NBPF10Q6P3W6 841 aaKnown RBP14.6□□□□□ -0.07
SEMA4D-213ENST00000455551 FAM173BQ6P4H8 233 aa14.6□□□□□ -0.07
SEMA4D-213ENST00000455551 NBPF15Q8N660 670 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms