RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 KCNA4P22459 653 aa14.59□□□□□ -0.07
HDAC9-217ENST00000455069 ERFEQ4G0M1 354 aa14.59□□□□□ -0.07
HDAC9-217ENST00000455069 DALRD3Q5D0E6 543 aaKnown RBP14.59□□□□□ -0.07
HDAC9-217ENST00000455069 ANKRD13DQ6ZTN6 518 aa14.59□□□□□ -0.07
HDAC9-217ENST00000455069 VAMP4O75379 141 aa14.58□□□□□ -0.08
HDAC9-217ENST00000455069 GOLGA2Q08379 1002 aa14.58□□□□□ -0.08
HDAC9-217ENST00000455069 TCIRG1Q13488 830 aa14.58□□□□□ -0.08
HDAC9-217ENST00000455069 NLRP10Q86W26 655 aa14.58□□□□□ -0.08
HDAC9-217ENST00000455069 NYXQ9GZU5 481 aa14.58□□□□□ -0.08
HDAC9-217ENST00000455069 TAF1P21675 1872 aa14.58□□□□□ -0.08
HDAC9-217ENST00000455069 PARP10Q53GL7 1025 aa14.57□□□□□ -0.08
HDAC9-217ENST00000455069 HSP90AB3PQ58FF7 597 aa14.57□□□□□ -0.08
HDAC9-217ENST00000455069 G2E3Q7L622 706 aa14.57□□□□□ -0.08
HDAC9-217ENST00000455069 TTLL6Q8N841 843 aa14.57□□□□□ -0.08
HDAC9-217ENST00000455069 ZNF526Q8TF50 670 aaPredicted RBP14.57□□□□□ -0.08
HDAC9-217ENST00000455069 ZNF428Q96B54 188 aa14.57□□□□□ -0.08
HDAC9-217ENST00000455069 ISCA1Q9BUE6 129 aa14.57□□□□□ -0.08
HDAC9-217ENST00000455069 MYH16Q9H6N6 1097 aa14.57□□□□□ -0.08
HDAC9-217ENST00000455069 PDZRN3Q9UPQ7 1066 aa14.57□□□□□ -0.08
HDAC9-217ENST00000455069 ATP5J2-PTCD1G3V325 749 aa14.56□□□□□ -0.08
HDAC9-217ENST00000455069 CRY2Q49AN0 593 aa14.56□□□□□ -0.08
HDAC9-217ENST00000455069 STYK1Q6J9G0 422 aa14.56□□□□□ -0.08
HDAC9-217ENST00000455069 C3orf67Q6ZVT6 689 aa14.56□□□□□ -0.08
HDAC9-217ENST00000455069 SYNE4Q8N205 404 aa14.56□□□□□ -0.08
HDAC9-217ENST00000455069 ZNF622Q969S3 477 aaKnown RBP eCLIP14.56□□□□□ -0.08
HDAC9-217ENST00000455069 TIAM2Q8IVF5 1701 aa14.55□□□□□ -0.08
HDAC9-217ENST00000455069 DICER1Q9UPY3 1922 aaKnown RBP14.55□□□□□ -0.08
HDAC9-217ENST00000455069 PPP1R42Q7Z4L9 355 aa14.55□□□□□ -0.08
HDAC9-217ENST00000455069 CDCA7LQ96GN5 454 aa14.55□□□□□ -0.08
HDAC9-217ENST00000455069 MASTLQ96GX5 879 aa14.55□□□□□ -0.08
HDAC9-217ENST00000455069 UTP14AQ9BVJ6 771 aaKnown RBP14.55□□□□□ -0.08
HDAC9-217ENST00000455069 STK31Q9BXU1 1019 aa14.55□□□□□ -0.08
HDAC9-217ENST00000455069 COL4A1P02462 1669 aa14.55□□□□□ -0.08
HDAC9-217ENST00000455069 SLC4A2P04920 1241 aa14.54□□□□□ -0.08
HDAC9-217ENST00000455069 GTF2E1P29083 439 aaPredicted RBP14.54□□□□□ -0.08
HDAC9-217ENST00000455069 SLFN5Q08AF3 891 aa14.54□□□□□ -0.08
HDAC9-217ENST00000455069 PRPF40BQ6NWY9 871 aaKnown RBP14.54□□□□□ -0.08
HDAC9-217ENST00000455069 ARHGAP27Q6ZUM4 889 aa14.54□□□□□ -0.08
HDAC9-217ENST00000455069 RIC3Q7Z5B4 369 aa14.54□□□□□ -0.08
HDAC9-217ENST00000455069 RNF123Q5XPI4 1314 aa14.54□□□□□ -0.08
HDAC9-217ENST00000455069 MYH3P11055 1940 aa14.53□□□□□ -0.08
HDAC9-217ENST00000455069 SNED1Q8TER0 1413 aa14.53□□□□□ -0.08
HDAC9-217ENST00000455069 E9PSI1 815 aa14.53□□□□□ -0.08
HDAC9-217ENST00000455069 KIF3CO14782 793 aa14.53□□□□□ -0.08
HDAC9-217ENST00000455069 NPR1P16066 1061 aa14.53□□□□□ -0.08
HDAC9-217ENST00000455069 PRELPP51888 382 aa14.53□□□□□ -0.08
HDAC9-217ENST00000455069 RASSF7Q02833 373 aa14.53□□□□□ -0.08
HDAC9-217ENST00000455069 CHMP4AQ9BY43 222 aa14.53□□□□□ -0.08
HDAC9-217ENST00000455069 PI4KAP2A4QPH2 592 aa14.52□□□□□ -0.09
HDAC9-217ENST00000455069 NFKBIEO00221 500 aa14.52□□□□□ -0.09
HDAC9-217ENST00000455069 C21orf2O43822 256 aa14.52□□□□□ -0.09
HDAC9-217ENST00000455069 FLIIQ13045 1269 aa14.52□□□□□ -0.09
HDAC9-217ENST00000455069 TRIM28Q13263 835 aaKnown RBP14.52□□□□□ -0.09
HDAC9-217ENST00000455069 SLC10A5Q5PT55 438 aa14.52□□□□□ -0.09
HDAC9-217ENST00000455069 SLC51AQ86UW1 340 aa14.52□□□□□ -0.09
HDAC9-217ENST00000455069 TRMT2AQ8IZ69 625 aaKnown RBP14.52□□□□□ -0.09
HDAC9-217ENST00000455069 PI4KAP1Q8N8J0 262 aa14.52□□□□□ -0.09
HDAC9-217ENST00000455069 C7orf43Q8WVR3 580 aa14.52□□□□□ -0.09
HDAC9-217ENST00000455069 CNKSR1Q969H4 720 aa14.52□□□□□ -0.09
HDAC9-217ENST00000455069 MYD88Q99836 296 aa14.52□□□□□ -0.09
HDAC9-217ENST00000455069 METTL22Q9BUU2 404 aaPredicted RBP14.52□□□□□ -0.09
HDAC9-217ENST00000455069 TRMT112Q9UI30 125 aaKnown RBP14.52□□□□□ -0.09
HDAC9-217ENST00000455069 MAP3K2Q9Y2U5 619 aa14.52□□□□□ -0.09
HDAC9-217ENST00000455069 SH3TC1Q8TE82 1336 aa14.51□□□□□ -0.09
HDAC9-217ENST00000455069 IGKV5-2P06315 115 aa14.51□□□□□ -0.09
HDAC9-217ENST00000455069 HCLS1P14317 486 aaPredicted RBP14.51□□□□□ -0.09
HDAC9-217ENST00000455069 KSR2Q6VAB6 950 aa14.51□□□□□ -0.09
HDAC9-217ENST00000455069 ZNF219Q9P2Y4 722 aaPredicted RBP14.51□□□□□ -0.09
HDAC9-217ENST00000455069 LRRC37AA6NMS7 1700 aa14.5□□□□□ -0.09
HDAC9-217ENST00000455069 DDX58O95786 925 aaKnown RBP14.5□□□□□ -0.09
HDAC9-217ENST00000455069 OLFM4Q6UX06 510 aa14.5□□□□□ -0.09
HDAC9-217ENST00000455069 FAM89AQ96GI7 184 aa14.5□□□□□ -0.09
HDAC9-217ENST00000455069 HSPA6P17066 643 aa14.49□□□□□ -0.09
HDAC9-217ENST00000455069 HOXA10P31260 410 aaPredicted RBP14.49□□□□□ -0.09
HDAC9-217ENST00000455069 FKBP5Q13451 457 aaPredicted RBP14.48□□□□□ -0.09
HDAC9-217ENST00000455069 CWF19L2Q2TBE0 894 aaKnown RBP14.48□□□□□ -0.09
HDAC9-217ENST00000455069 RTL5Q5HYW3 569 aaPredicted RBP14.48□□□□□ -0.09
HDAC9-217ENST00000455069 C9orf131Q5VYM1 1079 aa14.48□□□□□ -0.09
HDAC9-217ENST00000455069 CCDC191Q8NCU4 936 aa14.48□□□□□ -0.09
HDAC9-217ENST00000455069 NLRP3Q96P20 1036 aa14.48□□□□□ -0.09
HDAC9-217ENST00000455069 SPEF2Q9C093 1822 aa14.48□□□□□ -0.09
HDAC9-217ENST00000455069 ABCC4O15439 1325 aa14.47□□□□□ -0.09
HDAC9-217ENST00000455069 ZBTB38Q8NAP3 1195 aaPredicted RBP14.47□□□□□ -0.09
HDAC9-217ENST00000455069 JARID2Q92833 1246 aaPredicted RBP14.47□□□□□ -0.09
HDAC9-217ENST00000455069 RPGRQ92834 1020 aaKnown RBP14.47□□□□□ -0.09
HDAC9-217ENST00000455069 CRAMP1Q96RY5 1269 aa14.47□□□□□ -0.09
HDAC9-217ENST00000455069 CWC25Q9NXE8 425 aaPredicted RBP14.47□□□□□ -0.09
HDAC9-217ENST00000455069 RNF181Q9P0P0 153 aa14.47□□□□□ -0.09
HDAC9-217ENST00000455069 LTBP3Q9NS15 1303 aa14.46□□□□□ -0.09
HDAC9-217ENST00000455069 NEURL1BA8MQ27 555 aa14.46□□□□□ -0.09
HDAC9-217ENST00000455069 F6X3S4 739 aa14.46□□□□□ -0.09
HDAC9-217ENST00000455069 IRS4O14654 1257 aaPredicted RBP14.46□□□□□ -0.09
HDAC9-217ENST00000455069 PCCAP05165 728 aaPredicted RBP14.46□□□□□ -0.09
HDAC9-217ENST00000455069 ALDH1B1P30837 517 aa14.46□□□□□ -0.09
HDAC9-217ENST00000455069 DNAAF4Q8WXU2 420 aa14.46□□□□□ -0.09
HDAC9-217ENST00000455069 LTBP1Q14766 1721 aa14.46□□□□□ -0.1
HDAC9-217ENST00000455069 HNRNPUQ00839 825 aaKnown RBP eCLIP14.45□□□□□ -0.1
HDAC9-217ENST00000455069 CCDC93Q567U6 631 aa14.45□□□□□ -0.1
HDAC9-217ENST00000455069 MRPL50Q8N5N7 158 aaKnown RBP14.45□□□□□ -0.1
HDAC9-217ENST00000455069 SSH1Q8WYL5 1049 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms