RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 PDE4DIPQ5VU43 2346 aa13.27□□□□□ -0.29
CLCN4-204ENST00000454850 PER1O15534 1290 aaPredicted RBP13.26□□□□□ -0.29
CLCN4-204ENST00000454850 HLFQ16534 295 aa13.26□□□□□ -0.29
CLCN4-204ENST00000454850 NUTM1Q86Y26 1132 aa13.26□□□□□ -0.29
CLCN4-204ENST00000454850 SNED1Q8TER0 1413 aa13.26□□□□□ -0.29
CLCN4-204ENST00000454850 TSKSQ9UJT2 592 aa13.26□□□□□ -0.29
CLCN4-204ENST00000454850 TRAF5O00463 557 aa13.25□□□□□ -0.29
CLCN4-204ENST00000454850 TCERG1O14776 1098 aaKnown RBP13.25□□□□□ -0.29
CLCN4-204ENST00000454850 EPS15P42566 896 aa13.25□□□□□ -0.29
CLCN4-204ENST00000454850 SLC51AQ86UW1 340 aa13.25□□□□□ -0.29
CLCN4-204ENST00000454850 NGEFQ8N5V2 710 aa13.25□□□□□ -0.29
CLCN4-204ENST00000454850 RTF1Q92541 710 aaKnown RBP13.25□□□□□ -0.29
CLCN4-204ENST00000454850 PSMD1Q99460 953 aa13.25□□□□□ -0.29
CLCN4-204ENST00000454850 RSPH6AQ9H0K4 717 aa13.25□□□□□ -0.29
CLCN4-204ENST00000454850 ECE1P42892 770 aa13.24□□□□□ -0.29
CLCN4-204ENST00000454850 DCTN1Q14203 1278 aa13.24□□□□□ -0.29
CLCN4-204ENST00000454850 LARGE2Q8N3Y3 721 aa13.24□□□□□ -0.29
CLCN4-204ENST00000454850 RPGRQ92834 1020 aaKnown RBP13.24□□□□□ -0.29
CLCN4-204ENST00000454850 CFAP44Q96MT7 982 aa13.24□□□□□ -0.29
CLCN4-204ENST00000454850 GPR101Q96P66 508 aaPredicted RBP13.24□□□□□ -0.29
CLCN4-204ENST00000454850 KDM3BQ7LBC6 1761 aa13.23□□□□□ -0.29
CLCN4-204ENST00000454850 AOC2O75106 756 aa13.23□□□□□ -0.29
CLCN4-204ENST00000454850 SCNN1DP51172 638 aa13.23□□□□□ -0.29
CLCN4-204ENST00000454850 MLLT1Q03111 559 aaPredicted RBP13.23□□□□□ -0.29
CLCN4-204ENST00000454850 CRY2Q49AN0 593 aa13.22□□□□□ -0.29
CLCN4-204ENST00000454850 CFAP53Q96M91 514 aa13.22□□□□□ -0.29
CLCN4-204ENST00000454850 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
CLCN4-204ENST00000454850 LAMB2P55268 1798 aa13.22□□□□□ -0.29
CLCN4-204ENST00000454850 POLR2AP24928 1970 aaKnown RBP13.21□□□□□ -0.29
CLCN4-204ENST00000454850 RGL2O15211 777 aa13.21□□□□□ -0.29
CLCN4-204ENST00000454850 U2AF1L5P0DN76 240 aaPredicted RBP13.21□□□□□ -0.29
CLCN4-204ENST00000454850 GPTP24298 496 aa13.21□□□□□ -0.29
CLCN4-204ENST00000454850 U2AF1Q01081 240 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLCN4-204ENST00000454850 CST9Q5W186 159 aa13.21□□□□□ -0.29
CLCN4-204ENST00000454850 CC2D2BQ6DHV5 1058 aa13.21□□□□□ -0.29
CLCN4-204ENST00000454850 NIM1KQ8IY84 436 aa13.21□□□□□ -0.29
CLCN4-204ENST00000454850 MIS18AQ9NYP9 233 aa13.21□□□□□ -0.29
CLCN4-204ENST00000454850 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
CLCN4-204ENST00000454850 PPEF1O14829 653 aaPredicted RBP13.2□□□□□ -0.3
CLCN4-204ENST00000454850 PPIP5K2O43314 1243 aa13.2□□□□□ -0.3
CLCN4-204ENST00000454850 USP50Q70EL3 339 aaPredicted RBP13.2□□□□□ -0.3
CLCN4-204ENST00000454850 CCER1Q8TC90 406 aaPredicted RBP13.2□□□□□ -0.3
CLCN4-204ENST00000454850 TLL2Q9Y6L7 1015 aa13.2□□□□□ -0.3
CLCN4-204ENST00000454850 TAF1P21675 1872 aa13.2□□□□□ -0.3
CLCN4-204ENST00000454850 UBN2Q6ZU65 1347 aa13.19□□□□□ -0.3
CLCN4-204ENST00000454850 CELF2O95319 508 aaKnown RBP13.19□□□□□ -0.3
CLCN4-204ENST00000454850 MYL6BP14649 208 aa13.19□□□□□ -0.3
CLCN4-204ENST00000454850 AOC3Q16853 763 aa13.19□□□□□ -0.3
CLCN4-204ENST00000454850 KIF6Q6ZMV9 814 aa13.19□□□□□ -0.3
CLCN4-204ENST00000454850 RBM17Q96I25 401 aaKnown RBP13.19□□□□□ -0.3
CLCN4-204ENST00000454850 ZBTB3Q9H5J0 574 aa13.19□□□□□ -0.3
CLCN4-204ENST00000454850 ZNF408Q9H9D4 720 aa13.19□□□□□ -0.3
CLCN4-204ENST00000454850 NUDCQ9Y266 331 aa13.19□□□□□ -0.3
CLCN4-204ENST00000454850 RRP7AQ9Y3A4 280 aaKnown RBP13.19□□□□□ -0.3
CLCN4-204ENST00000454850 RIC1Q4ADV7 1423 aa13.19□□□□□ -0.3
CLCN4-204ENST00000454850 MAP3K15Q6ZN16 1313 aa13.18□□□□□ -0.3
CLCN4-204ENST00000454850 ANKRD36CQ5JPF3 1778 aa13.18□□□□□ -0.3
CLCN4-204ENST00000454850 HOXA10P31260 410 aaPredicted RBP13.18□□□□□ -0.3
CLCN4-204ENST00000454850 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
CLCN4-204ENST00000454850 TTLL7Q6ZT98 887 aa13.18□□□□□ -0.3
CLCN4-204ENST00000454850 C3orf67Q6ZVT6 689 aa13.18□□□□□ -0.3
CLCN4-204ENST00000454850 GLIS2Q9BZE0 524 aaPredicted RBP13.18□□□□□ -0.3
CLCN4-204ENST00000454850 MCOLN1Q9GZU1 580 aa13.18□□□□□ -0.3
CLCN4-204ENST00000454850 ADARB2Q9NS39 739 aaKnown RBP13.18□□□□□ -0.3
CLCN4-204ENST00000454850 MAP2K2P36507 400 aa13.17□□□□□ -0.3
CLCN4-204ENST00000454850 SUSD4Q5VX71 490 aa13.17□□□□□ -0.3
CLCN4-204ENST00000454850 GPRC5DQ9NZD1 345 aa13.17□□□□□ -0.3
CLCN4-204ENST00000454850 IBTKQ9P2D0 1353 aaPredicted RBP13.17□□□□□ -0.3
CLCN4-204ENST00000454850 AKAP11Q9UKA4 1901 aa13.17□□□□□ -0.3
CLCN4-204ENST00000454850 ERVV-1B6SEH8 477 aa13.16□□□□□ -0.3
CLCN4-204ENST00000454850 RGS19P49795 217 aa13.16□□□□□ -0.3
CLCN4-204ENST00000454850 GMPSP49915 693 aaPredicted RBP13.16□□□□□ -0.3
CLCN4-204ENST00000454850 GRIPAP1Q4V328 841 aa13.16□□□□□ -0.3
CLCN4-204ENST00000454850 SAPCD2Q86UD0 394 aa13.16□□□□□ -0.3
CLCN4-204ENST00000454850 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
CLCN4-204ENST00000454850 TMX4Q9H1E5 349 aaPredicted RBP13.16□□□□□ -0.3
CLCN4-204ENST00000454850 NTSR2O95665 410 aa13.15□□□□□ -0.3
CLCN4-204ENST00000454850 CXCL9Q07325 125 aa13.15□□□□□ -0.3
CLCN4-204ENST00000454850 DGKZQ13574 1117 aa13.15□□□□□ -0.3
CLCN4-204ENST00000454850 CA12O43570 354 aa13.14□□□□□ -0.31
CLCN4-204ENST00000454850 HTATSF1O43719 755 aaKnown RBP13.14□□□□□ -0.31
CLCN4-204ENST00000454850 CIAPIN1Q6FI81 312 aa13.14□□□□□ -0.31
CLCN4-204ENST00000454850 BCL2L13Q9BXK5 485 aa13.14□□□□□ -0.31
CLCN4-204ENST00000454850 ZNRF3Q9ULT6 936 aa13.14□□□□□ -0.31
CLCN4-204ENST00000454850 ABCC4O15439 1325 aa13.13□□□□□ -0.31
CLCN4-204ENST00000454850 RAD17O75943 681 aa13.13□□□□□ -0.31
CLCN4-204ENST00000454850 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
CLCN4-204ENST00000454850 PPP1R42Q7Z4L9 355 aa13.13□□□□□ -0.31
CLCN4-204ENST00000454850 NLRP3Q96P20 1036 aa13.13□□□□□ -0.31
CLCN4-204ENST00000454850 ATP6V0A2Q9Y487 856 aa13.13□□□□□ -0.31
CLCN4-204ENST00000454850 SHTN1A0MZ66 631 aa13.12□□□□□ -0.31
CLCN4-204ENST00000454850 PPP2R1AP30153 589 aa13.12□□□□□ -0.31
CLCN4-204ENST00000454850 DPP8Q6V1X1 898 aaPredicted RBP13.12□□□□□ -0.31
CLCN4-204ENST00000454850 GIGYF2Q6Y7W6 1299 aaKnown RBP13.12□□□□□ -0.31
CLCN4-204ENST00000454850 ZNF34Q8IZ26 560 aa13.12□□□□□ -0.31
CLCN4-204ENST00000454850 TRPM4Q8TD43 1214 aa13.12□□□□□ -0.31
CLCN4-204ENST00000454850 THUMPD2Q9BTF0 503 aaKnown RBP13.12□□□□□ -0.31
CLCN4-204ENST00000454850 HIRAP54198 1017 aaPredicted RBP13.11□□□□□ -0.31
CLCN4-204ENST00000454850 EIF4A1P60842 406 aaKnown RBP13.11□□□□□ -0.31
CLCN4-204ENST00000454850 SUPT20HQ8NEM7 779 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms