RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 C7orf43Q8WVR3 580 aa9.43□□□□□ -0.9
CUL3-208ENST00000454323 SFI1A8K8P3 1242 aa9.42□□□□□ -0.9
CUL3-208ENST00000454323 PAX4O43316 350 aa9.42□□□□□ -0.9
CUL3-208ENST00000454323 PNMA5Q96PV4 448 aa9.42□□□□□ -0.9
CUL3-208ENST00000454323 RGS9O75916 674 aaPredicted RBP9.41□□□□□ -0.9
CUL3-208ENST00000454323 NCOA4Q13772 614 aa9.41□□□□□ -0.9
CUL3-208ENST00000454323 TXKP42681 527 aa9.4□□□□□ -0.9
CUL3-208ENST00000454323 MCTP1Q6DN14 999 aa9.4□□□□□ -0.9
CUL3-208ENST00000454323 TNS4Q8IZW8 715 aa9.4□□□□□ -0.9
CUL3-208ENST00000454323 SUSD3Q96L08 255 aa9.4□□□□□ -0.9
CUL3-208ENST00000454323 SSBP4Q9BWG4 385 aaPredicted RBP9.4□□□□□ -0.9
CUL3-208ENST00000454323 PHACTR1Q9C0D0 580 aa9.4□□□□□ -0.9
CUL3-208ENST00000454323 ZMYND15Q9H091 742 aa9.4□□□□□ -0.9
CUL3-208ENST00000454323 RBM19Q9Y4C8 960 aaKnown RBP9.4□□□□□ -0.9
CUL3-208ENST00000454323 M0R2N6 131 aa9.39□□□□□ -0.91
CUL3-208ENST00000454323 PSAPL1Q6NUJ1 521 aa9.39□□□□□ -0.91
CUL3-208ENST00000454323 POTEAQ6S8J7 498 aa9.39□□□□□ -0.91
CUL3-208ENST00000454323 SHISA2Q6UWI4 295 aa9.39□□□□□ -0.91
CUL3-208ENST00000454323 NUDT8Q8WV74 236 aa9.39□□□□□ -0.91
CUL3-208ENST00000454323 IGFLR1Q9H665 355 aa9.39□□□□□ -0.91
CUL3-208ENST00000454323 AFF1P51825 1210 aaKnown RBP9.38□□□□□ -0.91
CUL3-208ENST00000454323 TBCELQ5QJ74 424 aa9.38□□□□□ -0.91
CUL3-208ENST00000454323 DCAF11Q8TEB1 546 aa9.38□□□□□ -0.91
CUL3-208ENST00000454323 HSH2DQ96JZ2 352 aa9.38□□□□□ -0.91
CUL3-208ENST00000454323 USP17L5A8MUK1 530 aa9.37□□□□□ -0.91
CUL3-208ENST00000454323 PIK3CDO00329 1044 aa9.37□□□□□ -0.91
CUL3-208ENST00000454323 EPB42P16452 691 aa9.37□□□□□ -0.91
CUL3-208ENST00000454323 TPCN2Q8NHX9 752 aa9.37□□□□□ -0.91
CUL3-208ENST00000454323 DNAJB12Q9NXW2 375 aaKnown RBP9.37□□□□□ -0.91
CUL3-208ENST00000454323 FRRS1LQ9P0K9 344 aa9.37□□□□□ -0.91
CUL3-208ENST00000454323 MSL1Q68DK7 614 aa9.36□□□□□ -0.91
CUL3-208ENST00000454323 BTLAQ7Z6A9 289 aa9.36□□□□□ -0.91
CUL3-208ENST00000454323 FBXO11Q86XK2 927 aa9.36□□□□□ -0.91
CUL3-208ENST00000454323 DMRTC2Q8IXT2 367 aaPredicted RBP9.36□□□□□ -0.91
CUL3-208ENST00000454323 PCMTD2Q9NV79 361 aa9.36□□□□□ -0.91
CUL3-208ENST00000454323 HCN4Q9Y3Q4 1203 aa9.36□□□□□ -0.91
CUL3-208ENST00000454323 ARID4AP29374 1257 aaPredicted RBP9.35□□□□□ -0.91
CUL3-208ENST00000454323 IER5Q5VY09 327 aa9.35□□□□□ -0.91
CUL3-208ENST00000454323 IGF2-ASQ6U949 168 aa9.35□□□□□ -0.91
CUL3-208ENST00000454323 GAS2L2Q8NHY3 880 aa9.35□□□□□ -0.91
CUL3-208ENST00000454323 WFDC12Q8WWY7 111 aa9.35□□□□□ -0.91
CUL3-208ENST00000454323 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.35□□□□□ -0.91
CUL3-208ENST00000454323 CCINQ13939 588 aa9.34□□□□□ -0.91
CUL3-208ENST00000454323 SH3PXD2AQ5TCZ1 1133 aa9.34□□□□□ -0.91
CUL3-208ENST00000454323 CCDC102BQ68D86 513 aa9.34□□□□□ -0.91
CUL3-208ENST00000454323 STAG2Q8N3U4 1231 aa9.34□□□□□ -0.91
CUL3-208ENST00000454323 TSPAN10Q9H1Z9 355 aaPredicted RBP9.34□□□□□ -0.91
CUL3-208ENST00000454323 PPP1R12BO60237 982 aaPredicted RBP9.33□□□□□ -0.92
CUL3-208ENST00000454323 WFDC8Q8IUA0 241 aa9.33□□□□□ -0.92
CUL3-208ENST00000454323 ALG2Q9H553 416 aa9.33□□□□□ -0.92
CUL3-208ENST00000454323 COL17A1Q9UMD9 1497 aaPredicted RBP9.33□□□□□ -0.92
CUL3-208ENST00000454323 YBX3P16989 372 aaKnown RBP eCLIP9.32□□□□□ -0.923e-6■□□□□ 8.1
CUL3-208ENST00000454323 PRR23CQ6ZRP0 262 aa9.32□□□□□ -0.92
CUL3-208ENST00000454323 KRTAP19-1Q8IUB9 90 aa9.32□□□□□ -0.92
CUL3-208ENST00000454323 PLEKHM2Q8IWE5 1019 aa9.32□□□□□ -0.92
CUL3-208ENST00000454323 LARGE2Q8N3Y3 721 aa9.32□□□□□ -0.92
CUL3-208ENST00000454323 ZNF280CQ8ND82 737 aa9.32□□□□□ -0.92
CUL3-208ENST00000454323 PALM3A6NDB9 673 aaPredicted RBP9.31□□□□□ -0.92
CUL3-208ENST00000454323 GSC2O15499 205 aa9.31□□□□□ -0.92
CUL3-208ENST00000454323 IREB2P48200 963 aaKnown RBP9.31□□□□□ -0.92
CUL3-208ENST00000454323 FAM35AQ86V20 835 aa9.31□□□□□ -0.92
CUL3-208ENST00000454323 ALDH16A1Q8IZ83 802 aa9.31□□□□□ -0.92
CUL3-208ENST00000454323 C11orf16Q9NQ32 467 aa9.31□□□□□ -0.92
CUL3-208ENST00000454323 PTCD1O75127 700 aaKnown RBP9.3□□□□□ -0.92
CUL3-208ENST00000454323 NFKB1P19838 968 aa9.3□□□□□ -0.92
CUL3-208ENST00000454323 ILDR2Q71H61 639 aa9.3□□□□□ -0.92
CUL3-208ENST00000454323 TTC9Q92623 222 aa9.3□□□□□ -0.92
CUL3-208ENST00000454323 GSX2Q9BZM3 304 aa9.3□□□□□ -0.92
CUL3-208ENST00000454323 MAP3K6O95382 1288 aa9.29□□□□□ -0.92
CUL3-208ENST00000454323 NOS3P29474 1203 aa9.29□□□□□ -0.92
CUL3-208ENST00000454323 IRAK1P51617 712 aa9.29□□□□□ -0.92
CUL3-208ENST00000454323 SRA1Q9HD15 236 aaKnown RBP9.29□□□□□ -0.92
CUL3-208ENST00000454323 NAGPAQ9UK23 515 aa9.29□□□□□ -0.92
CUL3-208ENST00000454323 TGFBR3LH3BV60 316 aa9.28□□□□□ -0.92
CUL3-208ENST00000454323 COBLO75128 1261 aa9.28□□□□□ -0.92
CUL3-208ENST00000454323 UBTFP17480 764 aaKnown RBP9.28□□□□□ -0.92
CUL3-208ENST00000454323 ELMSAN1Q6PJG2 1045 aa9.28□□□□□ -0.92
CUL3-208ENST00000454323 DEPDC4Q8N2C3 294 aa9.28□□□□□ -0.92
CUL3-208ENST00000454323 KRTAP9-9Q9BYP9 154 aa9.28□□□□□ -0.92
CUL3-208ENST00000454323 KRTAP9-4Q9BYQ2 154 aa9.28□□□□□ -0.92
CUL3-208ENST00000454323 MCM6Q14566 821 aa9.27□□□□□ -0.93
CUL3-208ENST00000454323 RTN1Q16799 776 aa9.27□□□□□ -0.93
CUL3-208ENST00000454323 USP17L3A6NCW0 530 aa9.26□□□□□ -0.93
CUL3-208ENST00000454323 USP17L4A6NCW7 530 aa9.26□□□□□ -0.93
CUL3-208ENST00000454323 CPB1P15086 417 aa9.26□□□□□ -0.93
CUL3-208ENST00000454323 FSTP19883 344 aa9.26□□□□□ -0.93
CUL3-208ENST00000454323 USP17L2Q6R6M4 530 aa9.26□□□□□ -0.93
CUL3-208ENST00000454323 USP17L1Q7RTZ2 530 aa9.26□□□□□ -0.93
CUL3-208ENST00000454323 SIX5Q8N196 739 aa9.26□□□□□ -0.93
CUL3-208ENST00000454323 MRPL18Q9H0U6 180 aaKnown RBP9.26□□□□□ -0.93
CUL3-208ENST00000454323 AKTIPQ9H8T0 292 aa9.26□□□□□ -0.93
CUL3-208ENST00000454323 ZBTB7BO15156 539 aaPredicted RBP9.25□□□□□ -0.93
CUL3-208ENST00000454323 MAP4K3Q8IVH8 894 aa9.25□□□□□ -0.93
CUL3-208ENST00000454323 FMNL2Q96PY5 1086 aa9.25□□□□□ -0.93
CUL3-208ENST00000454323 LPIN3Q9BQK8 851 aa9.25□□□□□ -0.93
CUL3-208ENST00000454323 C2orf49Q9BVC5 232 aaPredicted RBP9.25□□□□□ -0.93
CUL3-208ENST00000454323 OGFOD1Q8N543 542 aa9.24□□□□□ -0.93
CUL3-208ENST00000454323 TRPM4Q8TD43 1214 aa9.24□□□□□ -0.93
CUL3-208ENST00000454323 MEGF10Q96KG7 1140 aa9.24□□□□□ -0.93
CUL3-208ENST00000454323 ATAD2Q6PL18 1390 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms