RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 CALD1Q05682 793 aaKnown RBP21.38■■□□□ 1.01
NCKIPSD-208ENST00000454134 C3orf67Q6ZVT6 689 aa21.38■■□□□ 1.01
NCKIPSD-208ENST00000454134 RPGRQ92834 1020 aaKnown RBP21.38■■□□□ 1.01
NCKIPSD-208ENST00000454134 UTP14AQ9BVJ6 771 aaKnown RBP21.38■■□□□ 1.01
NCKIPSD-208ENST00000454134 ELL2O00472 640 aaPredicted RBP21.37■■□□□ 1.01
NCKIPSD-208ENST00000454134 GNAI1P63096 354 aa21.37■■□□□ 1.01
NCKIPSD-208ENST00000454134 ZNF428Q96B54 188 aa21.37■■□□□ 1.01
NCKIPSD-208ENST00000454134 MRS2Q9HD23 443 aa21.37■■□□□ 1.01
NCKIPSD-208ENST00000454134 DBF4Q9UBU7 674 aaPredicted RBP21.37■■□□□ 1.01
NCKIPSD-208ENST00000454134 DICER1Q9UPY3 1922 aaKnown RBP21.37■■□□□ 1.01
NCKIPSD-208ENST00000454134 RIC1Q4ADV7 1423 aa21.37■■□□□ 1.01
NCKIPSD-208ENST00000454134 ANKRD36CQ5JPF3 1778 aa21.36■■□□□ 1.01
NCKIPSD-208ENST00000454134 NLRP10Q86W26 655 aa21.36■■□□□ 1.01
NCKIPSD-208ENST00000454134 TCIRG1Q13488 830 aa21.35■■□□□ 1.01
NCKIPSD-208ENST00000454134 HSP90AB3PQ58FF7 597 aa21.35■■□□□ 1.01
NCKIPSD-208ENST00000454134 SYNE4Q8N205 404 aa21.35■■□□□ 1.01
NCKIPSD-208ENST00000454134 RBM46Q8TBY0 533 aaKnown RBP21.35■■□□□ 1.01
NCKIPSD-208ENST00000454134 ZNF277Q9NRM2 450 aaPredicted RBP21.35■■□□□ 1.01
NCKIPSD-208ENST00000454134 HOXA10P31260 410 aaPredicted RBP21.34■■□□□ 1.01
NCKIPSD-208ENST00000454134 FKBP4Q02790 459 aaKnown RBP eCLIP21.34■■□□□ 1.01
NCKIPSD-208ENST00000454134 SLC51AQ86UW1 340 aa21.34■■□□□ 1.01
NCKIPSD-208ENST00000454134 CEP350Q5VT06 3117 aa21.34■■□□□ 1.01
NCKIPSD-208ENST00000454134 TCERG1O14776 1098 aaKnown RBP21.33■■□□□ 1.01
NCKIPSD-208ENST00000454134 VEGFAP15692 232 aaPredicted RBP21.33■■□□□ 1.01
NCKIPSD-208ENST00000454134 SLC10A5Q5PT55 438 aa21.33■■□□□ 1.01
NCKIPSD-208ENST00000454134 DPY19L2Q6NUT2 758 aa21.33■■□□□ 1.01
NCKIPSD-208ENST00000454134 ANKRD13DQ6ZTN6 518 aa21.33■■□□□ 1.01
NCKIPSD-208ENST00000454134 RTKN2Q8IZC4 609 aa21.33■■□□□ 1.01
NCKIPSD-208ENST00000454134 C8orf58Q8NAV2 365 aa21.33■■□□□ 1.01
NCKIPSD-208ENST00000454134 PLBD2Q8NHP8 589 aa21.33■■□□□ 1.01
NCKIPSD-208ENST00000454134 NLRP3Q96P20 1036 aa21.33■■□□□ 1.01
NCKIPSD-208ENST00000454134 HYPKQ9NX55 129 aa21.33■■□□□ 1.01
NCKIPSD-208ENST00000454134 HCLS1P14317 486 aaPredicted RBP21.32■■□□□ 1
NCKIPSD-208ENST00000454134 RBM17Q96I25 401 aaKnown RBP21.32■■□□□ 1
NCKIPSD-208ENST00000454134 TRMT112Q9UI30 125 aaKnown RBP21.32■■□□□ 1
NCKIPSD-208ENST00000454134 POTECB2RU33 542 aa21.31■■□□□ 1
NCKIPSD-208ENST00000454134 TSR2Q969E8 191 aaKnown RBP21.31■■□□□ 1
NCKIPSD-208ENST00000454134 CRAMP1Q96RY5 1269 aa21.31■■□□□ 1
NCKIPSD-208ENST00000454134 ATP5J2-PTCD1G3V325 749 aa21.3■■□□□ 1
NCKIPSD-208ENST00000454134 DDNO94850 711 aaPredicted RBP21.3■■□□□ 1
NCKIPSD-208ENST00000454134 RNF123Q5XPI4 1314 aa21.29■■□□□ 1
NCKIPSD-208ENST00000454134 SNED1Q8TER0 1413 aa21.29■■□□□ 1
NCKIPSD-208ENST00000454134 PPEF1O14829 653 aaPredicted RBP21.29■■□□□ 1
NCKIPSD-208ENST00000454134 WWC1Q8IX03 1113 aa21.29■■□□□ 1
NCKIPSD-208ENST00000454134 TSPYL6Q8N831 410 aa21.29■■□□□ 1
NCKIPSD-208ENST00000454134 PHAXQ9H814 394 aaKnown RBP21.29■■□□□ 1
NCKIPSD-208ENST00000454134 WDR90Q96KV7 1748 aa21.29■■□□□ 1
NCKIPSD-208ENST00000454134 SH3TC1Q8TE82 1336 aa21.29■■□□□ 1
NCKIPSD-208ENST00000454134 IARSP41252 1262 aaKnown RBP21.28■■□□□ 1
NCKIPSD-208ENST00000454134 FSTL1Q12841 308 aa21.28■■□□□ 1
NCKIPSD-208ENST00000454134 CCDC27Q2M243 656 aa21.28■■□□□ 1
NCKIPSD-208ENST00000454134 ISCA1Q9BUE6 129 aa21.28■■□□□ 1
NCKIPSD-208ENST00000454134 LAMB2P55268 1798 aa21.28■■□□□ 1
NCKIPSD-208ENST00000454134 APLP1P51693 650 aa21.27■■□□□ 1
NCKIPSD-208ENST00000454134 CC2D2BQ6DHV5 1058 aa21.27■■□□□ 1
NCKIPSD-208ENST00000454134 SALL2Q9Y467 1007 aaPredicted RBP21.27■■□□□ 1
NCKIPSD-208ENST00000454134 ABCC4O15439 1325 aa21.27■□□□□ 0.99
NCKIPSD-208ENST00000454134 RIC3Q7Z5B4 369 aa21.26■□□□□ 0.99
NCKIPSD-208ENST00000454134 SMC1BQ8NDV3 1235 aa21.26■□□□□ 0.99
NCKIPSD-208ENST00000454134 FAM89AQ96GI7 184 aa21.26■□□□□ 0.99
NCKIPSD-208ENST00000454134 PSMD1Q99460 953 aa21.26■□□□□ 0.99
NCKIPSD-208ENST00000454134 ZNF541Q9H0D2 1346 aa21.26■□□□□ 0.99
NCKIPSD-208ENST00000454134 GOLGA2Q08379 1002 aa21.25■□□□□ 0.99
NCKIPSD-208ENST00000454134 RTL5Q5HYW3 569 aaPredicted RBP21.25■□□□□ 0.99
NCKIPSD-208ENST00000454134 HTRA3P83110 453 aa21.24■□□□□ 0.99
NCKIPSD-208ENST00000454134 CCDC30Q5VVM6 783 aa21.24■□□□□ 0.99
NCKIPSD-208ENST00000454134 ATP6V0A2Q9Y487 856 aa21.23■□□□□ 0.99
NCKIPSD-208ENST00000454134 COL4A5P29400 1685 aa21.23■□□□□ 0.99
NCKIPSD-208ENST00000454134 DDX60Q8IY21 1712 aaKnown RBP21.22■□□□□ 0.99
NCKIPSD-208ENST00000454134 DDX46Q7L014 1031 aaKnown RBP21.22■□□□□ 0.99
NCKIPSD-208ENST00000454134 MYD88Q99836 296 aa21.22■□□□□ 0.99
NCKIPSD-208ENST00000454134 TAF1P21675 1872 aa21.22■□□□□ 0.99
NCKIPSD-208ENST00000454134 FZD9O00144 591 aa21.21■□□□□ 0.99
NCKIPSD-208ENST00000454134 TRIM28Q13263 835 aaKnown RBP21.21■□□□□ 0.99
NCKIPSD-208ENST00000454134 GRIPAP1Q4V328 841 aa21.21■□□□□ 0.99
NCKIPSD-208ENST00000454134 FAM9BQ8IZU0 186 aa21.21■□□□□ 0.99
NCKIPSD-208ENST00000454134 TMX4Q9H1E5 349 aaPredicted RBP21.21■□□□□ 0.99
NCKIPSD-208ENST00000454134 IL16Q14005 1332 aa21.21■□□□□ 0.99
NCKIPSD-208ENST00000454134 BBOX1O75936 387 aa21.2■□□□□ 0.98
NCKIPSD-208ENST00000454134 POTEIP0CG38 1075 aa21.2■□□□□ 0.98
NCKIPSD-208ENST00000454134 POTEJP0CG39 1038 aa21.2■□□□□ 0.98
NCKIPSD-208ENST00000454134 TWISTNBQ3B726 338 aaPredicted RBP21.2■□□□□ 0.98
NCKIPSD-208ENST00000454134 LARGE2Q8N3Y3 721 aa21.2■□□□□ 0.98
NCKIPSD-208ENST00000454134 JDP2Q8WYK2 163 aa21.2■□□□□ 0.98
NCKIPSD-208ENST00000454134 GRAPQ13588 217 aa21.19■□□□□ 0.98
NCKIPSD-208ENST00000454134 DNAJC5GQ8N7S2 189 aa21.19■□□□□ 0.98
NCKIPSD-208ENST00000454134 GRAPLQ8TC17 118 aaPredicted RBP21.19■□□□□ 0.98
NCKIPSD-208ENST00000454134 L3MBTL3Q96JM7 780 aaPredicted RBP21.19■□□□□ 0.98
NCKIPSD-208ENST00000454134 CHMP4AQ9BY43 222 aa21.19■□□□□ 0.98
NCKIPSD-208ENST00000454134 IRS4O14654 1257 aaPredicted RBP21.18■□□□□ 0.98
NCKIPSD-208ENST00000454134 NCBP3Q53F19 620 aaKnown RBP21.18■□□□□ 0.98
NCKIPSD-208ENST00000454134 SP8Q8IXZ3 490 aa21.18■□□□□ 0.98
NCKIPSD-208ENST00000454134 JARID2Q92833 1246 aaPredicted RBP21.18■□□□□ 0.98
NCKIPSD-208ENST00000454134 IQCA1LA6NCM1 817 aa21.17■□□□□ 0.98
NCKIPSD-208ENST00000454134 PPIP5K2O43314 1243 aa21.17■□□□□ 0.98
NCKIPSD-208ENST00000454134 DDX58O95786 925 aaKnown RBP21.17■□□□□ 0.98
NCKIPSD-208ENST00000454134 SF3B3Q15393 1217 aaKnown RBP21.17■□□□□ 0.98
NCKIPSD-208ENST00000454134 AOC3Q16853 763 aa21.17■□□□□ 0.98
NCKIPSD-208ENST00000454134 ZBTB38Q8NAP3 1195 aaPredicted RBP21.17■□□□□ 0.98
NCKIPSD-208ENST00000454134 METTL22Q9BUU2 404 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms