RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 CEP85Q6P2H3 762 aa15.66■□□□□ 0.1
HLA-DPA1-244ENST00000453337 NLRP10Q86W26 655 aa15.66■□□□□ 0.1
HLA-DPA1-244ENST00000453337 ZBTB38Q8NAP3 1195 aaPredicted RBP15.66■□□□□ 0.1
HLA-DPA1-244ENST00000453337 TFCP2L1Q9NZI6 479 aa15.66■□□□□ 0.1
HLA-DPA1-244ENST00000453337 BCORQ6W2J9 1755 aa15.66■□□□□ 0.1
HLA-DPA1-244ENST00000453337 PHF14O94880 888 aa15.65■□□□□ 0.1
HLA-DPA1-244ENST00000453337 UBE3BQ7Z3V4 1068 aa15.65■□□□□ 0.1
HLA-DPA1-244ENST00000453337 PPP1R42Q7Z4L9 355 aa15.65■□□□□ 0.1
HLA-DPA1-244ENST00000453337 NIP7Q9Y221 180 aaKnown RBP eCLIP15.65■□□□□ 0.1
HLA-DPA1-244ENST00000453337 HSP90B1P14625 803 aaKnown RBP15.64■□□□□ 0.09
HLA-DPA1-244ENST00000453337 SMIM5Q71RC9 77 aa15.64■□□□□ 0.09
HLA-DPA1-244ENST00000453337 SIRT2Q8IXJ6 389 aa15.64■□□□□ 0.09
HLA-DPA1-244ENST00000453337 SUCLG2Q96I99 432 aa15.64■□□□□ 0.09
HLA-DPA1-244ENST00000453337 TRMT112Q9UI30 125 aaKnown RBP15.64■□□□□ 0.09
HLA-DPA1-244ENST00000453337 KDM2BQ8NHM5 1336 aa15.64■□□□□ 0.09
HLA-DPA1-244ENST00000453337 USP42Q9H9J4 1324 aaKnown RBP15.64■□□□□ 0.09
HLA-DPA1-244ENST00000453337 CASP7P55210 303 aa15.63■□□□□ 0.09
HLA-DPA1-244ENST00000453337 GCC1Q96CN9 775 aa15.63■□□□□ 0.09
HLA-DPA1-244ENST00000453337 SETDB2Q96T68 719 aa15.63■□□□□ 0.09
HLA-DPA1-244ENST00000453337 UTP14AQ9BVJ6 771 aaKnown RBP15.63■□□□□ 0.09
HLA-DPA1-244ENST00000453337 STK32BQ9NY57 414 aa15.63■□□□□ 0.09
HLA-DPA1-244ENST00000453337 SRP68Q9UHB9 627 aaKnown RBP15.63■□□□□ 0.09
HLA-DPA1-244ENST00000453337 MTX1Q13505 466 aa15.62■□□□□ 0.09
HLA-DPA1-244ENST00000453337 DEFB132Q7Z7B7 95 aa15.62■□□□□ 0.09
HLA-DPA1-244ENST00000453337 AMIGO3Q86WK7 504 aa15.62■□□□□ 0.09
HLA-DPA1-244ENST00000453337 JARID2Q92833 1246 aaPredicted RBP15.62■□□□□ 0.09
HLA-DPA1-244ENST00000453337 BCL2L12Q9HB09 334 aa15.62■□□□□ 0.09
HLA-DPA1-244ENST00000453337 C4AP0C0L4 1744 aa15.62■□□□□ 0.09
HLA-DPA1-244ENST00000453337 CDHR2Q9BYE9 1310 aa15.62■□□□□ 0.09
HLA-DPA1-244ENST00000453337 SCN7AQ01118 1682 aa15.61■□□□□ 0.09
HLA-DPA1-244ENST00000453337 ZNF827Q17R98 1081 aa15.61■□□□□ 0.09
HLA-DPA1-244ENST00000453337 SUSD4Q5VX71 490 aa15.61■□□□□ 0.09
HLA-DPA1-244ENST00000453337 TBC1D9BQ66K14 1250 aa15.61■□□□□ 0.09
HLA-DPA1-244ENST00000453337 SMC5Q8IY18 1101 aa15.61■□□□□ 0.09
HLA-DPA1-244ENST00000453337 SSH3Q8TE77 659 aa15.61■□□□□ 0.09
HLA-DPA1-244ENST00000453337 FAM89AQ96GI7 184 aa15.61■□□□□ 0.09
HLA-DPA1-244ENST00000453337 KAZALD1Q96I82 304 aa15.61■□□□□ 0.09
HLA-DPA1-244ENST00000453337 PLA2G12BQ9BX93 195 aa15.61■□□□□ 0.09
HLA-DPA1-244ENST00000453337 NYXQ9GZU5 481 aa15.61■□□□□ 0.09
HLA-DPA1-244ENST00000453337 BICC1Q9H694 974 aaKnown RBP15.61■□□□□ 0.09
HLA-DPA1-244ENST00000453337 DCTPP1Q9H773 170 aa15.61■□□□□ 0.09
HLA-DPA1-244ENST00000453337 SRGAP3O43295 1099 aa15.6■□□□□ 0.09
HLA-DPA1-244ENST00000453337 SLC15A2Q16348 729 aa15.6■□□□□ 0.09
HLA-DPA1-244ENST00000453337 RTL5Q5HYW3 569 aaPredicted RBP15.6■□□□□ 0.09
HLA-DPA1-244ENST00000453337 UBN2Q6ZU65 1347 aa15.6■□□□□ 0.09
HLA-DPA1-244ENST00000453337 SH3TC1Q8TE82 1336 aa15.6■□□□□ 0.09
HLA-DPA1-244ENST00000453337 PNMA6EA0A0J9YXQ4 647 aa15.59■□□□□ 0.09
HLA-DPA1-244ENST00000453337 MSH5O43196 834 aa15.59■□□□□ 0.09
HLA-DPA1-244ENST00000453337 GYS1P13807 737 aa15.59■□□□□ 0.09
HLA-DPA1-244ENST00000453337 FOXO4P98177 505 aa15.59■□□□□ 0.09
HLA-DPA1-244ENST00000453337 POLA2Q14181 598 aa15.59■□□□□ 0.09
HLA-DPA1-244ENST00000453337 RABL6Q3YEC7 729 aaPredicted RBP15.59■□□□□ 0.09
HLA-DPA1-244ENST00000453337 TPTE2Q6XPS3 522 aa15.59■□□□□ 0.09
HLA-DPA1-244ENST00000453337 BICDL1Q6ZP65 573 aa15.59■□□□□ 0.09
HLA-DPA1-244ENST00000453337 COL23A1Q86Y22 540 aaPredicted RBP15.59■□□□□ 0.09
HLA-DPA1-244ENST00000453337 NLGN1Q8N2Q7 840 aa15.59■□□□□ 0.09
HLA-DPA1-244ENST00000453337 MYH3P11055 1940 aa15.58■□□□□ 0.09
HLA-DPA1-244ENST00000453337 IRS4O14654 1257 aaPredicted RBP15.58■□□□□ 0.08
HLA-DPA1-244ENST00000453337 PDE8AO60658 829 aa15.58■□□□□ 0.08
HLA-DPA1-244ENST00000453337 GTF2E1P29083 439 aaPredicted RBP15.58■□□□□ 0.08
HLA-DPA1-244ENST00000453337 HSP90AB4PQ58FF6 505 aa15.58■□□□□ 0.08
HLA-DPA1-244ENST00000453337 ZBTB47Q9UFB7 747 aaPredicted RBP15.58■□□□□ 0.08
HLA-DPA1-244ENST00000453337 QSER1Q2KHR3 1735 aa15.57■□□□□ 0.08
HLA-DPA1-244ENST00000453337 TUBGCP6Q96RT7 1819 aa15.57■□□□□ 0.08
HLA-DPA1-244ENST00000453337 FAM177BA6PVY3 158 aa15.57■□□□□ 0.08
HLA-DPA1-244ENST00000453337 NTSR2O95665 410 aa15.57■□□□□ 0.08
HLA-DPA1-244ENST00000453337 EPHA10Q5JZY3 1008 aa15.57■□□□□ 0.08
HLA-DPA1-244ENST00000453337 LMBR1LQ6UX01 489 aa15.57■□□□□ 0.08
HLA-DPA1-244ENST00000453337 UPF1Q92900 1129 aaKnown RBP eCLIP15.57■□□□□ 0.08
HLA-DPA1-244ENST00000453337 RAB11FIP3O75154 756 aa15.56■□□□□ 0.08
HLA-DPA1-244ENST00000453337 CSF1RP07333 972 aa15.56■□□□□ 0.08
HLA-DPA1-244ENST00000453337 TM4SF1P30408 202 aa15.56■□□□□ 0.08
HLA-DPA1-244ENST00000453337 NFIXQ14938 502 aa15.56■□□□□ 0.08
HLA-DPA1-244ENST00000453337 SLC10A5Q5PT55 438 aa15.56■□□□□ 0.08
HLA-DPA1-244ENST00000453337 NBPF5PQ86XG9 351 aaPredicted RBP15.56■□□□□ 0.08
HLA-DPA1-244ENST00000453337 CARMIL3Q8ND23 1372 aa15.55■□□□□ 0.08
HLA-DPA1-244ENST00000453337 PNPLA7Q6ZV29 1317 aa15.55■□□□□ 0.08
HLA-DPA1-244ENST00000453337 SURF6O75683 361 aaKnown RBP15.55■□□□□ 0.08
HLA-DPA1-244ENST00000453337 ANKRD45Q5TZF3 282 aa15.55■□□□□ 0.08
HLA-DPA1-244ENST00000453337 SYNE4Q8N205 404 aa15.55■□□□□ 0.08
HLA-DPA1-244ENST00000453337 ANO8Q9HCE9 1232 aaPredicted RBP15.55■□□□□ 0.08
HLA-DPA1-244ENST00000453337 NOP58Q9Y2X3 529 aaKnown RBP15.55■□□□□ 0.08
HLA-DPA1-244ENST00000453337 CHMP3Q9Y3E7 222 aa15.55■□□□□ 0.08
HLA-DPA1-244ENST00000453337 NPHP1O15259 732 aa15.54■□□□□ 0.08
HLA-DPA1-244ENST00000453337 NUCB1Q02818 461 aa15.54■□□□□ 0.08
HLA-DPA1-244ENST00000453337 CCDC57Q2TAC2 916 aa15.54■□□□□ 0.08
HLA-DPA1-244ENST00000453337 PELP1Q8IZL8 1130 aaKnown RBP15.54■□□□□ 0.08
HLA-DPA1-244ENST00000453337 PDZRN3Q9UPQ7 1066 aa15.54■□□□□ 0.08
HLA-DPA1-244ENST00000453337 HCLS1P14317 486 aaPredicted RBP15.53■□□□□ 0.08
HLA-DPA1-244ENST00000453337 CTSWP56202 376 aa15.53■□□□□ 0.08
HLA-DPA1-244ENST00000453337 G3BP1Q13283 466 aaKnown RBP eCLIP15.53■□□□□ 0.08
HLA-DPA1-244ENST00000453337 ERFEQ4G0M1 354 aa15.53■□□□□ 0.08
HLA-DPA1-244ENST00000453337 NUTM1Q86Y26 1132 aa15.53■□□□□ 0.08
HLA-DPA1-244ENST00000453337 TTLL11Q8NHH1 800 aa15.53■□□□□ 0.08
HLA-DPA1-244ENST00000453337 COPRSQ9NQ92 184 aa15.53■□□□□ 0.08
HLA-DPA1-244ENST00000453337 COL24A1Q17RW2 1714 aa15.53■□□□□ 0.08
HLA-DPA1-244ENST00000453337 SERPINB2P05120 415 aa15.52■□□□□ 0.08
HLA-DPA1-244ENST00000453337 IFIT5Q13325 482 aaKnown RBP15.52■□□□□ 0.08
HLA-DPA1-244ENST00000453337 CHD1LQ86WJ1 897 aa15.52■□□□□ 0.08
HLA-DPA1-244ENST00000453337 ERC1Q8IUD2 1116 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms