RNA–Protein interactions for RNA: ENST00000453007.1

SCN3A-205, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-205ENST00000453007 ANKMY2Q8IV38 441 aa9.75□□□□□ -0.85
SCN3A-205ENST00000453007 FAM182BQ5T319 152 aa9.74□□□□□ -0.85
SCN3A-205ENST00000453007 C1orf53Q5VUE5 145 aa9.74□□□□□ -0.85
SCN3A-205ENST00000453007 ZNF428Q96B54 188 aa9.74□□□□□ -0.85
SCN3A-205ENST00000453007 NGLY1Q96IV0 654 aa9.74□□□□□ -0.85
SCN3A-205ENST00000453007 C21orf2O43822 256 aa9.73□□□□□ -0.85
SCN3A-205ENST00000453007 HIRAP54198 1017 aaPredicted RBP9.73□□□□□ -0.85
SCN3A-205ENST00000453007 LAMC2Q13753 1193 aa9.73□□□□□ -0.85
SCN3A-205ENST00000453007 ELOAQ14241 798 aaKnown RBP9.73□□□□□ -0.85
SCN3A-205ENST00000453007 GAS2L2Q8NHY3 880 aa9.73□□□□□ -0.85
SCN3A-205ENST00000453007 FAM200AQ8TCP9 573 aa9.73□□□□□ -0.85
SCN3A-205ENST00000453007 HSH2DQ96JZ2 352 aa9.73□□□□□ -0.85
SCN3A-205ENST00000453007 STRN4Q9NRL3 753 aa9.73□□□□□ -0.85
SCN3A-205ENST00000453007 ANKIB1Q9P2G1 1089 aa9.73□□□□□ -0.85
SCN3A-205ENST00000453007 NOVA2Q9UNW9 492 aaKnown RBP9.73□□□□□ -0.85
SCN3A-205ENST00000453007 EFSO43281 561 aa9.72□□□□□ -0.85
SCN3A-205ENST00000453007 ADH6P28332 368 aa9.72□□□□□ -0.85
SCN3A-205ENST00000453007 RBM25P49756 843 aaKnown RBP9.72□□□□□ -0.85
SCN3A-205ENST00000453007 ALDH16A1Q8IZ83 802 aa9.72□□□□□ -0.85
SCN3A-205ENST00000453007 HCN2Q9UL51 889 aa9.72□□□□□ -0.85
SCN3A-205ENST00000453007 EPXP11678 715 aa9.71□□□□□ -0.86
SCN3A-205ENST00000453007 PCBP4P57723 403 aaKnown RBP9.71□□□□□ -0.86
SCN3A-205ENST00000453007 SNRPNP63162 240 aaKnown RBP9.71□□□□□ -0.86
SCN3A-205ENST00000453007 C7orf43Q8WVR3 580 aa9.71□□□□□ -0.86
SCN3A-205ENST00000453007 CEP63Q96MT8 703 aa9.71□□□□□ -0.86
SCN3A-205ENST00000453007 C2orf49Q9BVC5 232 aaPredicted RBP9.71□□□□□ -0.86
SCN3A-205ENST00000453007 MKL2Q9ULH7 1088 aa9.71□□□□□ -0.86
SCN3A-205ENST00000453007 POTEAQ6S8J7 498 aa9.7□□□□□ -0.86
SCN3A-205ENST00000453007 STAG2Q8N3U4 1231 aa9.7□□□□□ -0.86
SCN3A-205ENST00000453007 AVENQ9NQS1 362 aaPredicted RBP9.7□□□□□ -0.86
SCN3A-205ENST00000453007 ZMIZ1Q9ULJ6 1067 aa9.7□□□□□ -0.86
SCN3A-205ENST00000453007 SFSWAPQ12872 951 aaKnown RBP9.69□□□□□ -0.86
SCN3A-205ENST00000453007 CCDC27Q2M243 656 aa9.69□□□□□ -0.86
SCN3A-205ENST00000453007 TMEM164Q5U3C3 297 aa9.69□□□□□ -0.86
SCN3A-205ENST00000453007 ZNF468Q5VIY5 522 aaPredicted RBP9.69□□□□□ -0.86
SCN3A-205ENST00000453007 SND1Q7KZF4 910 aaKnown RBP eCLIP9.69□□□□□ -0.86
SCN3A-205ENST00000453007 STK32AQ8WU08 396 aa9.69□□□□□ -0.86
SCN3A-205ENST00000453007 SUSD3Q96L08 255 aa9.69□□□□□ -0.86
SCN3A-205ENST00000453007 BRD7Q9NPI1 651 aa9.69□□□□□ -0.86
SCN3A-205ENST00000453007 IGFBP4P22692 258 aa9.68□□□□□ -0.86
SCN3A-205ENST00000453007 HIF1AQ16665 826 aa9.68□□□□□ -0.86
SCN3A-205ENST00000453007 ZNF280CQ8ND82 737 aa9.68□□□□□ -0.86
SCN3A-205ENST00000453007 BTBD6Q96KE9 485 aa9.68□□□□□ -0.86
SCN3A-205ENST00000453007 KLF15Q9UIH9 416 aa9.68□□□□□ -0.86
SCN3A-205ENST00000453007 SYT9Q86SS6 491 aa9.67□□□□□ -0.86
SCN3A-205ENST00000453007 FCHSD1Q86WN1 690 aa9.67□□□□□ -0.86
SCN3A-205ENST00000453007 ERCC6Q03468 1493 aa9.66□□□□□ -0.86
SCN3A-205ENST00000453007 GRIN2CQ14957 1233 aa9.66□□□□□ -0.86
SCN3A-205ENST00000453007 VTI1AQ96AJ9 217 aa9.66□□□□□ -0.86
SCN3A-205ENST00000453007 CADPSQ9ULU8 1353 aa9.65□□□□□ -0.86
SCN3A-205ENST00000453007 NEUROD1Q13562 356 aa9.65□□□□□ -0.86
SCN3A-205ENST00000453007 B4GALNT3Q6L9W6 998 aa9.65□□□□□ -0.86
SCN3A-205ENST00000453007 GPAT2Q6NUI2 795 aa9.65□□□□□ -0.86
SCN3A-205ENST00000453007 CHSY3Q70JA7 882 aa9.65□□□□□ -0.86
SCN3A-205ENST00000453007 GNEQ9Y223 722 aaKnown RBP9.65□□□□□ -0.86
SCN3A-205ENST00000453007 PIK3R2O00459 728 aa9.64□□□□□ -0.87
SCN3A-205ENST00000453007 TYRO3Q06418 890 aa9.64□□□□□ -0.87
SCN3A-205ENST00000453007 SPEM2Q0P670 501 aa9.64□□□□□ -0.87
SCN3A-205ENST00000453007 RTN1Q16799 776 aa9.64□□□□□ -0.87
SCN3A-205ENST00000453007 RAB44Q7Z6P3 723 aaPredicted RBP9.64□□□□□ -0.87
SCN3A-205ENST00000453007 DCAF5Q96JK2 942 aa9.64□□□□□ -0.87
SCN3A-205ENST00000453007 SLC30A3Q99726 388 aa9.64□□□□□ -0.87
SCN3A-205ENST00000453007 KCNH4Q9UQ05 1017 aa9.64□□□□□ -0.87
SCN3A-205ENST00000453007 ALAS2P22557 587 aa9.63□□□□□ -0.87
SCN3A-205ENST00000453007 BTLAQ7Z6A9 289 aa9.63□□□□□ -0.87
SCN3A-205ENST00000453007 FOXO3O43524 673 aa9.62□□□□□ -0.87
SCN3A-205ENST00000453007 SWI5Q1ZZU3 235 aa9.62□□□□□ -0.87
SCN3A-205ENST00000453007 PHLDB3Q6NSJ2 640 aa9.62□□□□□ -0.87
SCN3A-205ENST00000453007 ELOA3CA0A087WX78 387 aaPredicted RBP9.61□□□□□ -0.87
SCN3A-205ENST00000453007 ELOA3DA6NLF2 546 aaPredicted RBP9.61□□□□□ -0.87
SCN3A-205ENST00000453007 GNB5O14775 395 aa9.61□□□□□ -0.87
SCN3A-205ENST00000453007 SIN3BO75182 1162 aa9.61□□□□□ -0.87
SCN3A-205ENST00000453007 WEE1P30291 646 aa9.61□□□□□ -0.87
SCN3A-205ENST00000453007 ELOA3BQ3SY89 546 aa9.61□□□□□ -0.87
SCN3A-205ENST00000453007 ELOA3Q8NG57 546 aa9.61□□□□□ -0.87
SCN3A-205ENST00000453007 TOP2AP11388 1531 aaKnown RBP9.61□□□□□ -0.87
SCN3A-205ENST00000453007 CCDC88BA6NC98 1476 aa9.6□□□□□ -0.87
SCN3A-205ENST00000453007 HOXB4P17483 251 aaPredicted RBP9.6□□□□□ -0.87
SCN3A-205ENST00000453007 DGKGP49619 791 aa9.6□□□□□ -0.87
SCN3A-205ENST00000453007 LINC00114Q6XXX2 140 aa9.6□□□□□ -0.87
SCN3A-205ENST00000453007 TXNDC2Q86VQ3 553 aa9.6□□□□□ -0.87
SCN3A-205ENST00000453007 KLK14Q9P0G3 267 aa9.6□□□□□ -0.87
SCN3A-205ENST00000453007 SLAIN2Q9P270 581 aa9.6□□□□□ -0.87
SCN3A-205ENST00000453007 TGFBR3LH3BV60 316 aa9.59□□□□□ -0.87
SCN3A-205ENST00000453007 KCNQ4P56696 695 aa9.59□□□□□ -0.87
SCN3A-205ENST00000453007 CCER1Q8TC90 406 aaPredicted RBP9.59□□□□□ -0.87
SCN3A-205ENST00000453007 BHMTQ93088 406 aa9.59□□□□□ -0.87
SCN3A-205ENST00000453007 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.59□□□□□ -0.87
SCN3A-205ENST00000453007 AMOTL2Q9Y2J4 779 aa9.59□□□□□ -0.87
SCN3A-205ENST00000453007 E9PSI1 815 aa9.58□□□□□ -0.88
SCN3A-205ENST00000453007 TBC1D8BQ0IIM8 1120 aa9.58□□□□□ -0.88
SCN3A-205ENST00000453007 DGKZQ13574 1117 aa9.58□□□□□ -0.88
SCN3A-205ENST00000453007 PLA2G4EQ3MJ16 856 aa9.58□□□□□ -0.88
SCN3A-205ENST00000453007 IER5Q5VY09 327 aa9.58□□□□□ -0.88
SCN3A-205ENST00000453007 CLP1Q92989 425 aaKnown RBP9.58□□□□□ -0.88
SCN3A-205ENST00000453007 PRIMPOLQ96LW4 560 aa9.58□□□□□ -0.88
SCN3A-205ENST00000453007 SUV39H2Q9H5I1 410 aa9.58□□□□□ -0.88
SCN3A-205ENST00000453007 PRMT3O60678 531 aa9.57□□□□□ -0.88
SCN3A-205ENST00000453007 IGHA1P01876 353 aa9.57□□□□□ -0.88
SCN3A-205ENST00000453007 SSFA2P28290 1259 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms