RNA–Protein interactions for RNA: ENST00000451156.1

TRPS1-205, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 4

Gene TRPS1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-205ENST00000451156 SOGA3Q5TF21 947 aa28.01■■■□□ 2.07
TRPS1-205ENST00000451156 CCDC30Q5VVM6 783 aa28.01■■■□□ 2.07
TRPS1-205ENST00000451156 SALL2Q9Y467 1007 aaPredicted RBP28.01■■■□□ 2.07
TRPS1-205ENST00000451156 RNF123Q5XPI4 1314 aa28■■■□□ 2.07
TRPS1-205ENST00000451156 PRELPP51888 382 aa28■■■□□ 2.07
TRPS1-205ENST00000451156 SLX4Q8IY92 1834 aa27.99■■■□□ 2.07
TRPS1-205ENST00000451156 HOXA10P31260 410 aaPredicted RBP27.99■■■□□ 2.07
TRPS1-205ENST00000451156 SBF1O95248 1867 aa27.98■■■□□ 2.07
TRPS1-205ENST00000451156 C1QTNF8P60827 252 aa27.98■■■□□ 2.07
TRPS1-205ENST00000451156 ISCA1Q9BUE6 129 aa27.98■■■□□ 2.07
TRPS1-205ENST00000451156 PHAXQ9H814 394 aaKnown RBP27.98■■■□□ 2.07
TRPS1-205ENST00000451156 NLRP3Q96P20 1036 aa27.97■■■□□ 2.07
TRPS1-205ENST00000451156 LTBP3Q9NS15 1303 aa27.96■■■□□ 2.07
TRPS1-205ENST00000451156 ZC3H4Q9UPT8 1303 aaKnown RBP27.96■■■□□ 2.07
TRPS1-205ENST00000451156 TRIM28Q13263 835 aaKnown RBP27.96■■■□□ 2.07
TRPS1-205ENST00000451156 TRMT112Q9UI30 125 aaKnown RBP27.96■■■□□ 2.07
TRPS1-205ENST00000451156 TWISTNBQ3B726 338 aaPredicted RBP27.95■■■□□ 2.06
TRPS1-205ENST00000451156 RPGRQ92834 1020 aaKnown RBP27.95■■■□□ 2.06
TRPS1-205ENST00000451156 GOLGA2Q08379 1002 aa27.94■■■□□ 2.06
TRPS1-205ENST00000451156 CCDC93Q567U6 631 aa27.94■■■□□ 2.06
TRPS1-205ENST00000451156 C3orf67Q6ZVT6 689 aa27.94■■■□□ 2.06
TRPS1-205ENST00000451156 RIC3Q7Z5B4 369 aa27.94■■■□□ 2.06
TRPS1-205ENST00000451156 CRAMP1Q96RY5 1269 aa27.94■■■□□ 2.06
TRPS1-205ENST00000451156 TAOK3Q9H2K8 898 aa27.94■■■□□ 2.06
TRPS1-205ENST00000451156 RBM17Q96I25 401 aaKnown RBP27.93■■■□□ 2.06
TRPS1-205ENST00000451156 SH3TC1Q8TE82 1336 aa27.92■■■□□ 2.06
TRPS1-205ENST00000451156 FANCIQ9NVI1 1328 aa27.92■■■□□ 2.06
TRPS1-205ENST00000451156 ARFGEF2Q9Y6D5 1785 aa27.92■■■□□ 2.06
TRPS1-205ENST00000451156 ATP5J2-PTCD1G3V325 749 aa27.92■■■□□ 2.06
TRPS1-205ENST00000451156 KIF3CO14782 793 aa27.92■■■□□ 2.06
TRPS1-205ENST00000451156 SYNE4Q8N205 404 aa27.92■■■□□ 2.06
TRPS1-205ENST00000451156 TNRC6CQ9HCJ0 1690 aaKnown RBP27.91■■■□□ 2.06
TRPS1-205ENST00000451156 RTKN2Q8IZC4 609 aa27.91■■■□□ 2.06
TRPS1-205ENST00000451156 STK31Q9BXU1 1019 aa27.91■■■□□ 2.06
TRPS1-205ENST00000451156 FER1L6Q2WGJ9 1857 aa27.91■■■□□ 2.06
TRPS1-205ENST00000451156 DDX58O95786 925 aaKnown RBP27.9■■■□□ 2.06
TRPS1-205ENST00000451156 HCLS1P14317 486 aaPredicted RBP27.9■■■□□ 2.06
TRPS1-205ENST00000451156 SPINK5Q9NQ38 1064 aaPredicted RBP27.9■■■□□ 2.06
TRPS1-205ENST00000451156 ANKRD36CQ5JPF3 1778 aa27.9■■■□□ 2.06
TRPS1-205ENST00000451156 KDM2BQ8NHM5 1336 aa27.9■■■□□ 2.06
TRPS1-205ENST00000451156 CC2D2BQ6DHV5 1058 aa27.89■■■□□ 2.06
TRPS1-205ENST00000451156 OLFM4Q6UX06 510 aa27.89■■■□□ 2.06
TRPS1-205ENST00000451156 CCER2I3L3R5 266 aa27.87■■■□□ 2.05
TRPS1-205ENST00000451156 VAMP4O75379 141 aa27.87■■■□□ 2.05
TRPS1-205ENST00000451156 FKBP4Q02790 459 aaKnown RBP eCLIP27.87■■■□□ 2.05
TRPS1-205ENST00000451156 NMRK2Q9NPI5 230 aa27.87■■■□□ 2.05
TRPS1-205ENST00000451156 GLTPD2A6NH11 291 aa27.86■■■□□ 2.05
TRPS1-205ENST00000451156 TCERG1O14776 1098 aaKnown RBP27.86■■■□□ 2.05
TRPS1-205ENST00000451156 SLC4A2P04920 1241 aa27.86■■■□□ 2.05
TRPS1-205ENST00000451156 EXOSC9Q06265 439 aaKnown RBP27.86■■■□□ 2.05
TRPS1-205ENST00000451156 GRIPAP1Q4V328 841 aa27.86■■■□□ 2.05
TRPS1-205ENST00000451156 KSR2Q6VAB6 950 aa27.86■■■□□ 2.05
TRPS1-205ENST00000451156 FAM89AQ96GI7 184 aa27.86■■■□□ 2.05
TRPS1-205ENST00000451156 METTL22Q9BUU2 404 aaPredicted RBP27.86■■■□□ 2.05
TRPS1-205ENST00000451156 MYH16Q9H6N6 1097 aa27.86■■■□□ 2.05
TRPS1-205ENST00000451156 ZNF521Q96K83 1311 aa27.86■■■□□ 2.05
TRPS1-205ENST00000451156 CACNA1SQ13698 1873 aa27.85■■■□□ 2.05
TRPS1-205ENST00000451156 MYD88Q99836 296 aa27.85■■■□□ 2.05
TRPS1-205ENST00000451156 CCDC191Q8NCU4 936 aa27.84■■■□□ 2.05
TRPS1-205ENST00000451156 ZNF428Q96B54 188 aa27.84■■■□□ 2.05
TRPS1-205ENST00000451156 CCDC88AQ3V6T2 1871 aa27.84■■■□□ 2.05
TRPS1-205ENST00000451156 PI4KAP2A4QPH2 592 aa27.83■■■□□ 2.05
TRPS1-205ENST00000451156 BBOX1O75936 387 aa27.83■■■□□ 2.05
TRPS1-205ENST00000451156 G2E3Q7L622 706 aa27.83■■■□□ 2.05
TRPS1-205ENST00000451156 PI4KAP1Q8N8J0 262 aa27.83■■■□□ 2.05
TRPS1-205ENST00000451156 PSMD1Q99460 953 aa27.83■■■□□ 2.05
TRPS1-205ENST00000451156 MAP3K2Q9Y2U5 619 aa27.83■■■□□ 2.05
TRPS1-205ENST00000451156 PPEF1O14829 653 aaPredicted RBP27.82■■■□□ 2.04
TRPS1-205ENST00000451156 DPY19L2Q6NUT2 758 aa27.82■■■□□ 2.04
TRPS1-205ENST00000451156 ZBTB38Q8NAP3 1195 aaPredicted RBP27.82■■■□□ 2.04
TRPS1-205ENST00000451156 SNED1Q8TER0 1413 aa27.82■■■□□ 2.04
TRPS1-205ENST00000451156 SF3B3Q15393 1217 aaKnown RBP27.81■■■□□ 2.04
TRPS1-205ENST00000451156 DDX46Q7L014 1031 aaKnown RBP27.81■■■□□ 2.04
TRPS1-205ENST00000451156 RRAGCQ9HB90 399 aa27.81■■■□□ 2.04
TRPS1-205ENST00000451156 ZNF277Q9NRM2 450 aaPredicted RBP27.81■■■□□ 2.04
TRPS1-205ENST00000451156 ATP6V0A2Q9Y487 856 aa27.81■■■□□ 2.04
TRPS1-205ENST00000451156 ABCC4O15439 1325 aa27.81■■■□□ 2.04
TRPS1-205ENST00000451156 IRS4O14654 1257 aaPredicted RBP27.8■■■□□ 2.04
TRPS1-205ENST00000451156 TOMM70O94826 608 aa27.8■■■□□ 2.04
TRPS1-205ENST00000451156 CWC25Q9NXE8 425 aaPredicted RBP27.8■■■□□ 2.04
TRPS1-205ENST00000451156 DICER1Q9UPY3 1922 aaKnown RBP27.79■■■□□ 2.04
TRPS1-205ENST00000451156 PCCAP05165 728 aaPredicted RBP27.78■■■□□ 2.04
TRPS1-205ENST00000451156 HSP90B1P14625 803 aaKnown RBP27.78■■■□□ 2.04
TRPS1-205ENST00000451156 RTL5Q5HYW3 569 aaPredicted RBP27.78■■■□□ 2.04
TRPS1-205ENST00000451156 TMX4Q9H1E5 349 aaPredicted RBP27.78■■■□□ 2.04
TRPS1-205ENST00000451156 IARSP41252 1262 aaKnown RBP27.77■■■□□ 2.04
TRPS1-205ENST00000451156 FLIIQ13045 1269 aa27.77■■■□□ 2.04
TRPS1-205ENST00000451156 GRAPQ13588 217 aa27.77■■■□□ 2.04
TRPS1-205ENST00000451156 SP8Q8IXZ3 490 aa27.77■■■□□ 2.04
TRPS1-205ENST00000451156 GRAPLQ8TC17 118 aaPredicted RBP27.77■■■□□ 2.04
TRPS1-205ENST00000451156 IGKV5-2P06315 115 aa27.76■■■□□ 2.03
TRPS1-205ENST00000451156 VEGFAP15692 232 aaPredicted RBP27.76■■■□□ 2.03
TRPS1-205ENST00000451156 NEXNQ0ZGT2 675 aa27.76■■■□□ 2.03
TRPS1-205ENST00000451156 TMC4Q7Z404 712 aa27.74■■■□□ 2.03
TRPS1-205ENST00000451156 SLC51AQ86UW1 340 aa27.74■■■□□ 2.03
TRPS1-205ENST00000451156 C16orf71Q8IYS4 520 aaPredicted RBP27.74■■■□□ 2.03
TRPS1-205ENST00000451156 RBM46Q8TBY0 533 aaKnown RBP27.73■■■□□ 2.03
TRPS1-205ENST00000451156 LAMB2P55268 1798 aa27.73■■■□□ 2.03
TRPS1-205ENST00000451156 TIAM2Q8IVF5 1701 aa27.72■■■□□ 2.03
TRPS1-205ENST00000451156 POTECB2RU33 542 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms