RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 TCERG1O14776 1098 aaKnown RBP16.69■□□□□ 0.26
SNRNP27-203ENST00000450162 SRGNP10124 158 aa16.69■□□□□ 0.26
SNRNP27-203ENST00000450162 HSP90B1P14625 803 aaKnown RBP16.69■□□□□ 0.26
SNRNP27-203ENST00000450162 YBX3P16989 372 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNRNP27-203ENST00000450162 NEXNQ0ZGT2 675 aa16.69■□□□□ 0.26
SNRNP27-203ENST00000450162 STYK1Q6J9G0 422 aa16.69■□□□□ 0.26
SNRNP27-203ENST00000450162 TTLL6Q8N841 843 aa16.69■□□□□ 0.26
SNRNP27-203ENST00000450162 PI4KAP1Q8N8J0 262 aa16.69■□□□□ 0.26
SNRNP27-203ENST00000450162 CCDC191Q8NCU4 936 aa16.69■□□□□ 0.26
SNRNP27-203ENST00000450162 MASTLQ96GX5 879 aa16.69■□□□□ 0.26
SNRNP27-203ENST00000450162 TRMT112Q9UI30 125 aaKnown RBP16.69■□□□□ 0.26
SNRNP27-203ENST00000450162 BCS1LQ9Y276 419 aa16.69■□□□□ 0.26
SNRNP27-203ENST00000450162 CACNA1FO60840 1977 aa16.69■□□□□ 0.26
SNRNP27-203ENST00000450162 NPR1P16066 1061 aa16.68■□□□□ 0.26
SNRNP27-203ENST00000450162 FKBP5Q13451 457 aaPredicted RBP16.68■□□□□ 0.26
SNRNP27-203ENST00000450162 ALDH1L2Q3SY69 923 aa16.68■□□□□ 0.26
SNRNP27-203ENST00000450162 ERFEQ4G0M1 354 aa16.68■□□□□ 0.26
SNRNP27-203ENST00000450162 CCDC24Q8N4L8 307 aa16.68■□□□□ 0.26
SNRNP27-203ENST00000450162 CNKSR1Q969H4 720 aa16.68■□□□□ 0.26
SNRNP27-203ENST00000450162 MAP3K2Q9Y2U5 619 aa16.68■□□□□ 0.26
SNRNP27-203ENST00000450162 ZBED9Q6R2W3 1325 aa16.68■□□□□ 0.26
SNRNP27-203ENST00000450162 SH3TC1Q8TE82 1336 aa16.68■□□□□ 0.26
SNRNP27-203ENST00000450162 CRY2Q49AN0 593 aa16.67■□□□□ 0.26
SNRNP27-203ENST00000450162 G2E3Q7L622 706 aa16.67■□□□□ 0.26
SNRNP27-203ENST00000450162 NUTM1Q86Y26 1132 aa16.67■□□□□ 0.26
SNRNP27-203ENST00000450162 NLRP3Q96P20 1036 aa16.67■□□□□ 0.26
SNRNP27-203ENST00000450162 KIAA1551Q9HCM1 1747 aa16.67■□□□□ 0.26
SNRNP27-203ENST00000450162 ATP5J2-PTCD1G3V325 749 aa16.66■□□□□ 0.26
SNRNP27-203ENST00000450162 ALDH1B1P30837 517 aa16.66■□□□□ 0.26
SNRNP27-203ENST00000450162 ZNF622Q969S3 477 aaKnown RBP eCLIP16.66■□□□□ 0.266e-7■■■□□ 15.4
SNRNP27-203ENST00000450162 MYD88Q99836 296 aa16.66■□□□□ 0.26
SNRNP27-203ENST00000450162 N4BP2Q86UW6 1770 aaPredicted RBP16.65■□□□□ 0.26
SNRNP27-203ENST00000450162 ZBTB38Q8NAP3 1195 aaPredicted RBP16.65■□□□□ 0.26
SNRNP27-203ENST00000450162 DNAAF4Q8WXU2 420 aa16.65■□□□□ 0.26
SNRNP27-203ENST00000450162 CWC25Q9NXE8 425 aaPredicted RBP16.65■□□□□ 0.26
SNRNP27-203ENST00000450162 ADCY9O60503 1353 aa16.64■□□□□ 0.26
SNRNP27-203ENST00000450162 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.25
SNRNP27-203ENST00000450162 HOXA10P31260 410 aaPredicted RBP16.64■□□□□ 0.25
SNRNP27-203ENST00000450162 PTPRCP08575 1304 aa16.64■□□□□ 0.25
SNRNP27-203ENST00000450162 ABCC12Q96J65 1359 aa16.64■□□□□ 0.25
SNRNP27-203ENST00000450162 PCCAP05165 728 aaPredicted RBP16.63■□□□□ 0.25
SNRNP27-203ENST00000450162 BRPF1P55201 1214 aaPredicted RBP16.63■□□□□ 0.25
SNRNP27-203ENST00000450162 SOGA3Q5TF21 947 aa16.63■□□□□ 0.25
SNRNP27-203ENST00000450162 MRPL50Q8N5N7 158 aaKnown RBP16.63■□□□□ 0.25
SNRNP27-203ENST00000450162 LINS1Q8NG48 757 aa16.63■□□□□ 0.25
SNRNP27-203ENST00000450162 RPGRQ92834 1020 aaKnown RBP16.63■□□□□ 0.25
SNRNP27-203ENST00000450162 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
SNRNP27-203ENST00000450162 ANKRD31Q8N7Z5 1873 aa16.63■□□□□ 0.25
SNRNP27-203ENST00000450162 SSH1Q8WYL5 1049 aa16.62■□□□□ 0.25
SNRNP27-203ENST00000450162 FAM89AQ96GI7 184 aa16.62■□□□□ 0.25
SNRNP27-203ENST00000450162 RBM17Q96I25 401 aaKnown RBP16.62■□□□□ 0.25
SNRNP27-203ENST00000450162 CRAMP1Q96RY5 1269 aa16.62■□□□□ 0.25
SNRNP27-203ENST00000450162 ARFGEF2Q9Y6D5 1785 aa16.61■□□□□ 0.25
SNRNP27-203ENST00000450162 BRCA1P38398 1863 aaKnown RBP16.61■□□□□ 0.25
SNRNP27-203ENST00000450162 NEURL1BA8MQ27 555 aa16.61■□□□□ 0.25
SNRNP27-203ENST00000450162 IGKV5-2P06315 115 aa16.61■□□□□ 0.25
SNRNP27-203ENST00000450162 ARHGAP27Q6ZUM4 889 aa16.61■□□□□ 0.25
SNRNP27-203ENST00000450162 DLEC1Q9Y238 1755 aa16.61■□□□□ 0.25
SNRNP27-203ENST00000450162 IRS4O14654 1257 aaPredicted RBP16.6■□□□□ 0.25
SNRNP27-203ENST00000450162 HCLS1P14317 486 aaPredicted RBP16.6■□□□□ 0.25
SNRNP27-203ENST00000450162 SF3B3Q15393 1217 aaKnown RBP16.6■□□□□ 0.25
SNRNP27-203ENST00000450162 GRIPAP1Q4V328 841 aa16.6■□□□□ 0.25
SNRNP27-203ENST00000450162 PRPF40BQ6NWY9 871 aaKnown RBP16.6■□□□□ 0.25
SNRNP27-203ENST00000450162 RNF39Q9H2S5 420 aa16.6■□□□□ 0.25
SNRNP27-203ENST00000450162 SMC4Q9NTJ3 1288 aa16.6■□□□□ 0.25
SNRNP27-203ENST00000450162 CC2D2BQ6DHV5 1058 aa16.59■□□□□ 0.25
SNRNP27-203ENST00000450162 CDHR2Q9BYE9 1310 aa16.59■□□□□ 0.25
SNRNP27-203ENST00000450162 ARFGEF1Q9Y6D6 1849 aa16.59■□□□□ 0.25
SNRNP27-203ENST00000450162 PDE8AO60658 829 aa16.58■□□□□ 0.24
SNRNP27-203ENST00000450162 ALDH1L1O75891 902 aa16.58■□□□□ 0.24
SNRNP27-203ENST00000450162 BBOX1O75936 387 aa16.58■□□□□ 0.24
SNRNP27-203ENST00000450162 YY1P25490 414 aa16.58■□□□□ 0.24
SNRNP27-203ENST00000450162 RARSP54136 660 aaKnown RBP16.58■□□□□ 0.24
SNRNP27-203ENST00000450162 GCKRQ14397 625 aa16.58■□□□□ 0.24
SNRNP27-203ENST00000450162 CWF19L2Q2TBE0 894 aaKnown RBP16.58■□□□□ 0.24
SNRNP27-203ENST00000450162 BEND3Q5T5X7 828 aa16.58■□□□□ 0.24
SNRNP27-203ENST00000450162 DDX46Q7L014 1031 aaKnown RBP16.58■□□□□ 0.24
SNRNP27-203ENST00000450162 SYNE4Q8N205 404 aa16.58■□□□□ 0.24
SNRNP27-203ENST00000450162 C7orf43Q8WVR3 580 aa16.58■□□□□ 0.24
SNRNP27-203ENST00000450162 F6X3S4 739 aa16.57■□□□□ 0.24
SNRNP27-203ENST00000450162 H7C1W4 665 aa16.57■□□□□ 0.24
SNRNP27-203ENST00000450162 C21orf2O43822 256 aa16.57■□□□□ 0.24
SNRNP27-203ENST00000450162 TMC4Q7Z404 712 aa16.57■□□□□ 0.24
SNRNP27-203ENST00000450162 TMX4Q9H1E5 349 aaPredicted RBP16.57■□□□□ 0.24
SNRNP27-203ENST00000450162 KIF16BQ96L93 1317 aa16.56■□□□□ 0.24
SNRNP27-203ENST00000450162 RTL5Q5HYW3 569 aaPredicted RBP16.56■□□□□ 0.24
SNRNP27-203ENST00000450162 C3orf67Q6ZVT6 689 aa16.56■□□□□ 0.24
SNRNP27-203ENST00000450162 RTKN2Q8IZC4 609 aa16.56■□□□□ 0.24
SNRNP27-203ENST00000450162 ARHGAP45Q92619 1136 aa16.56■□□□□ 0.24
SNRNP27-203ENST00000450162 SRCIN1Q9C0H9 1055 aa16.56■□□□□ 0.24
SNRNP27-203ENST00000450162 GOLGB1Q14789 3259 aaKnown RBP16.56■□□□□ 0.24
SNRNP27-203ENST00000450162 CHD4Q14839 1912 aa16.55■□□□□ 0.24
SNRNP27-203ENST00000450162 LTBP3Q9NS15 1303 aa16.55■□□□□ 0.24
SNRNP27-203ENST00000450162 UTRNP46939 3433 aa16.55■□□□□ 0.24
SNRNP27-203ENST00000450162 IPO8O15397 1037 aaKnown RBP16.55■□□□□ 0.24
SNRNP27-203ENST00000450162 CCDC152Q4G0S7 254 aa16.55■□□□□ 0.24
SNRNP27-203ENST00000450162 CCDC93Q567U6 631 aa16.55■□□□□ 0.24
SNRNP27-203ENST00000450162 SLC4A10Q6U841 1118 aa16.55■□□□□ 0.24
SNRNP27-203ENST00000450162 PLA2G12BQ9BX93 195 aa16.55■□□□□ 0.24
SNRNP27-203ENST00000450162 BCL2L13Q9BXK5 485 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms