RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 ZNF853P0CG23 659 aa22.54■■□□□ 1.2
CLTCL1-203ENST00000449918 ANP32CO43423 234 aa22.53■■□□□ 1.2
CLTCL1-203ENST00000449918 HOXA10P31260 410 aaPredicted RBP22.53■■□□□ 1.2
CLTCL1-203ENST00000449918 FKBP4Q02790 459 aaKnown RBP eCLIP22.53■■□□□ 1.2
CLTCL1-203ENST00000449918 FSTL1Q12841 308 aa22.53■■□□□ 1.2
CLTCL1-203ENST00000449918 TCIRG1Q13488 830 aa22.53■■□□□ 1.2
CLTCL1-203ENST00000449918 RBM17Q96I25 401 aaKnown RBP22.53■■□□□ 1.2
CLTCL1-203ENST00000449918 NLRP3Q96P20 1036 aa22.53■■□□□ 1.2
CLTCL1-203ENST00000449918 RIC1Q4ADV7 1423 aa22.53■■□□□ 1.2
CLTCL1-203ENST00000449918 RNF123Q5XPI4 1314 aa22.53■■□□□ 1.2
CLTCL1-203ENST00000449918 APLP1P51693 650 aa22.52■■□□□ 1.2
CLTCL1-203ENST00000449918 SLC10A5Q5PT55 438 aa22.52■■□□□ 1.2
CLTCL1-203ENST00000449918 HYPKQ9NX55 129 aa22.52■■□□□ 1.2
CLTCL1-203ENST00000449918 FER1L6Q2WGJ9 1857 aa22.51■■□□□ 1.19
CLTCL1-203ENST00000449918 CCDC184Q52MB2 194 aa22.51■■□□□ 1.19
CLTCL1-203ENST00000449918 CC2D2BQ6DHV5 1058 aa22.51■■□□□ 1.19
CLTCL1-203ENST00000449918 PLBD2Q8NHP8 589 aa22.51■■□□□ 1.19
CLTCL1-203ENST00000449918 CRAMP1Q96RY5 1269 aa22.51■■□□□ 1.19
CLTCL1-203ENST00000449918 ARFGEF2Q9Y6D5 1785 aa22.5■■□□□ 1.19
CLTCL1-203ENST00000449918 GRIPAP1Q4V328 841 aa22.5■■□□□ 1.19
CLTCL1-203ENST00000449918 ANKRD13DQ6ZTN6 518 aa22.5■■□□□ 1.19
CLTCL1-203ENST00000449918 NLRP10Q86W26 655 aa22.5■■□□□ 1.19
CLTCL1-203ENST00000449918 CHMP4AQ9BY43 222 aa22.5■■□□□ 1.19
CLTCL1-203ENST00000449918 OLFM4Q6UX06 510 aa22.49■■□□□ 1.19
CLTCL1-203ENST00000449918 SMC1BQ8NDV3 1235 aa22.49■■□□□ 1.19
CLTCL1-203ENST00000449918 ZNF277Q9NRM2 450 aaPredicted RBP22.49■■□□□ 1.19
CLTCL1-203ENST00000449918 TNRC6CQ9HCJ0 1690 aaKnown RBP22.49■■□□□ 1.19
CLTCL1-203ENST00000449918 TMX4Q9H1E5 349 aaPredicted RBP22.48■■□□□ 1.19
CLTCL1-203ENST00000449918 MRS2Q9HD23 443 aa22.48■■□□□ 1.19
CLTCL1-203ENST00000449918 TRMT112Q9UI30 125 aaKnown RBP22.48■■□□□ 1.19
CLTCL1-203ENST00000449918 CCDC88AQ3V6T2 1871 aa22.47■■□□□ 1.19
CLTCL1-203ENST00000449918 SYNE4Q8N205 404 aa22.47■■□□□ 1.19
CLTCL1-203ENST00000449918 PSMD1Q99460 953 aa22.47■■□□□ 1.19
CLTCL1-203ENST00000449918 CACNA1SQ13698 1873 aa22.47■■□□□ 1.19
CLTCL1-203ENST00000449918 TIAM2Q8IVF5 1701 aa22.46■■□□□ 1.19
CLTCL1-203ENST00000449918 ELL2O00472 640 aaPredicted RBP22.46■■□□□ 1.19
CLTCL1-203ENST00000449918 C3orf67Q6ZVT6 689 aa22.46■■□□□ 1.19
CLTCL1-203ENST00000449918 SH3TC1Q8TE82 1336 aa22.46■■□□□ 1.19
CLTCL1-203ENST00000449918 PPEF1O14829 653 aaPredicted RBP22.45■■□□□ 1.18
CLTCL1-203ENST00000449918 DDNO94850 711 aaPredicted RBP22.45■■□□□ 1.18
CLTCL1-203ENST00000449918 IARSP41252 1262 aaKnown RBP22.45■■□□□ 1.18
CLTCL1-203ENST00000449918 CCDC27Q2M243 656 aa22.45■■□□□ 1.18
CLTCL1-203ENST00000449918 POTECB2RU33 542 aa22.44■■□□□ 1.18
CLTCL1-203ENST00000449918 DICER1Q9UPY3 1922 aaKnown RBP22.43■■□□□ 1.18
CLTCL1-203ENST00000449918 HCLS1P14317 486 aaPredicted RBP22.43■■□□□ 1.18
CLTCL1-203ENST00000449918 GOLGA2Q08379 1002 aa22.43■■□□□ 1.18
CLTCL1-203ENST00000449918 C8orf58Q8NAV2 365 aa22.43■■□□□ 1.18
CLTCL1-203ENST00000449918 ISCA1Q9BUE6 129 aa22.43■■□□□ 1.18
CLTCL1-203ENST00000449918 TCERG1O14776 1098 aaKnown RBP22.42■■□□□ 1.18
CLTCL1-203ENST00000449918 BBOX1O75936 387 aa22.42■■□□□ 1.18
CLTCL1-203ENST00000449918 NCBP3Q53F19 620 aaKnown RBP22.42■■□□□ 1.18
CLTCL1-203ENST00000449918 CCDC30Q5VVM6 783 aa22.42■■□□□ 1.18
CLTCL1-203ENST00000449918 RIC3Q7Z5B4 369 aa22.42■■□□□ 1.18
CLTCL1-203ENST00000449918 WWC1Q8IX03 1113 aa22.42■■□□□ 1.18
CLTCL1-203ENST00000449918 JDP2Q8WYK2 163 aa22.42■■□□□ 1.18
CLTCL1-203ENST00000449918 CEP350Q5VT06 3117 aa22.41■■□□□ 1.18
CLTCL1-203ENST00000449918 IQCA1LA6NCM1 817 aa22.41■■□□□ 1.18
CLTCL1-203ENST00000449918 ATP5J2-PTCD1G3V325 749 aa22.41■■□□□ 1.18
CLTCL1-203ENST00000449918 DDX46Q7L014 1031 aaKnown RBP22.41■■□□□ 1.18
CLTCL1-203ENST00000449918 ATP6V0A2Q9Y487 856 aa22.41■■□□□ 1.18
CLTCL1-203ENST00000449918 WDR90Q96KV7 1748 aa22.4■■□□□ 1.18
CLTCL1-203ENST00000449918 TRIM28Q13263 835 aaKnown RBP22.4■■□□□ 1.18
CLTCL1-203ENST00000449918 ABCC4O15439 1325 aa22.39■■□□□ 1.18
CLTCL1-203ENST00000449918 FZD9O00144 591 aa22.39■■□□□ 1.17
CLTCL1-203ENST00000449918 L3MBTL3Q96JM7 780 aaPredicted RBP22.39■■□□□ 1.17
CLTCL1-203ENST00000449918 PHAXQ9H814 394 aaKnown RBP22.39■■□□□ 1.17
CLTCL1-203ENST00000449918 SNED1Q8TER0 1413 aa22.39■■□□□ 1.17
CLTCL1-203ENST00000449918 DDX58O95786 925 aaKnown RBP22.38■■□□□ 1.17
CLTCL1-203ENST00000449918 FAM89AQ96GI7 184 aa22.38■■□□□ 1.17
CLTCL1-203ENST00000449918 ANKRD36CQ5JPF3 1778 aa22.38■■□□□ 1.17
CLTCL1-203ENST00000449918 IL16Q14005 1332 aa22.37■■□□□ 1.17
CLTCL1-203ENST00000449918 SP8Q8IXZ3 490 aa22.37■■□□□ 1.17
CLTCL1-203ENST00000449918 LARGE2Q8N3Y3 721 aa22.37■■□□□ 1.17
CLTCL1-203ENST00000449918 TSR2Q969E8 191 aaKnown RBP22.37■■□□□ 1.17
CLTCL1-203ENST00000449918 ZNF428Q96B54 188 aa22.37■■□□□ 1.17
CLTCL1-203ENST00000449918 VPS33BQ9H267 617 aa22.37■■□□□ 1.17
CLTCL1-203ENST00000449918 ZNF541Q9H0D2 1346 aa22.36■■□□□ 1.17
CLTCL1-203ENST00000449918 HSP90B1P14625 803 aaKnown RBP22.36■■□□□ 1.17
CLTCL1-203ENST00000449918 EIF6P56537 245 aaKnown RBP22.36■■□□□ 1.17
CLTCL1-203ENST00000449918 GRAPQ13588 217 aa22.36■■□□□ 1.17
CLTCL1-203ENST00000449918 TMC4Q7Z404 712 aa22.36■■□□□ 1.17
CLTCL1-203ENST00000449918 DNAJC5GQ8N7S2 189 aa22.36■■□□□ 1.17
CLTCL1-203ENST00000449918 TSPYL6Q8N831 410 aa22.36■■□□□ 1.17
CLTCL1-203ENST00000449918 SUPT20HQ8NEM7 779 aa22.36■■□□□ 1.17
CLTCL1-203ENST00000449918 GRAPLQ8TC17 118 aaPredicted RBP22.36■■□□□ 1.17
CLTCL1-203ENST00000449918 GPC2Q8N158 579 aa22.35■■□□□ 1.17
CLTCL1-203ENST00000449918 STK31Q9BXU1 1019 aa22.35■■□□□ 1.17
CLTCL1-203ENST00000449918 SF3B3Q15393 1217 aaKnown RBP22.34■■□□□ 1.17
CLTCL1-203ENST00000449918 CHADLQ6NUI6 762 aa22.34■■□□□ 1.17
CLTCL1-203ENST00000449918 ZBTB38Q8NAP3 1195 aaPredicted RBP22.34■■□□□ 1.17
CLTCL1-203ENST00000449918 TAF1DQ9H5J8 278 aaPredicted RBP22.34■■□□□ 1.17
CLTCL1-203ENST00000449918 HACL1Q9UJ83 578 aa22.34■■□□□ 1.17
CLTCL1-203ENST00000449918 IRS4O14654 1257 aaPredicted RBP22.33■■□□□ 1.17
CLTCL1-203ENST00000449918 PPIP5K2O43314 1243 aa22.33■■□□□ 1.17
CLTCL1-203ENST00000449918 TWISTNBQ3B726 338 aaPredicted RBP22.33■■□□□ 1.17
CLTCL1-203ENST00000449918 DPP8Q6V1X1 898 aaPredicted RBP22.33■■□□□ 1.17
CLTCL1-203ENST00000449918 NIM1KQ8IY84 436 aa22.33■■□□□ 1.17
CLTCL1-203ENST00000449918 MPNDQ8N594 471 aa22.33■■□□□ 1.17
CLTCL1-203ENST00000449918 CCDC191Q8NCU4 936 aa22.33■■□□□ 1.17
CLTCL1-203ENST00000449918 MYD88Q99836 296 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms