RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 TRAF5O00463 557 aa18.36■□□□□ 0.53
CPSF7-207ENST00000449811 HLFQ16534 295 aa18.36■□□□□ 0.53
CPSF7-207ENST00000449811 CRY2Q49AN0 593 aa18.36■□□□□ 0.53
CPSF7-207ENST00000449811 CST9Q5W186 159 aa18.36■□□□□ 0.53
CPSF7-207ENST00000449811 USP50Q70EL3 339 aaPredicted RBP18.36■□□□□ 0.53
CPSF7-207ENST00000449811 PHACTR3Q96KR7 559 aa18.36■□□□□ 0.53
CPSF7-207ENST00000449811 TLL2Q9Y6L7 1015 aa18.36■□□□□ 0.53
CPSF7-207ENST00000449811 ABCC12Q96J65 1359 aa18.35■□□□□ 0.53
CPSF7-207ENST00000449811 PRKAR2BP31323 418 aa18.35■□□□□ 0.53
CPSF7-207ENST00000449811 LARGE2Q8N3Y3 721 aa18.35■□□□□ 0.53
CPSF7-207ENST00000449811 AOC2O75106 756 aa18.34■□□□□ 0.53
CPSF7-207ENST00000449811 MAP2K2P36507 400 aa18.34■□□□□ 0.53
CPSF7-207ENST00000449811 RPGRQ92834 1020 aaKnown RBP18.34■□□□□ 0.53
CPSF7-207ENST00000449811 PCGF6Q9BYE7 350 aa18.34■□□□□ 0.53
CPSF7-207ENST00000449811 NYXQ9GZU5 481 aa18.34■□□□□ 0.53
CPSF7-207ENST00000449811 PCDH10Q9P2E7 1040 aa18.34■□□□□ 0.53
CPSF7-207ENST00000449811 CNGB1Q14028 1251 aaPredicted RBP18.33■□□□□ 0.52
CPSF7-207ENST00000449811 GRIPAP1Q4V328 841 aa18.33■□□□□ 0.52
CPSF7-207ENST00000449811 NUTM1Q86Y26 1132 aa18.33■□□□□ 0.52
CPSF7-207ENST00000449811 RTF1Q92541 710 aaKnown RBP18.33■□□□□ 0.52
CPSF7-207ENST00000449811 CFAP44Q96MT7 982 aa18.33■□□□□ 0.52
CPSF7-207ENST00000449811 RSPH6AQ9H0K4 717 aa18.33■□□□□ 0.52
CPSF7-207ENST00000449811 CA12O43570 354 aa18.32■□□□□ 0.52
CPSF7-207ENST00000449811 MCM10Q7L590 875 aa18.32■□□□□ 0.52
CPSF7-207ENST00000449811 NIM1KQ8IY84 436 aa18.32■□□□□ 0.52
CPSF7-207ENST00000449811 TRPM7Q96QT4 1865 aa18.32■□□□□ 0.52
CPSF7-207ENST00000449811 HOXA10P31260 410 aaPredicted RBP18.31■□□□□ 0.52
CPSF7-207ENST00000449811 MCOLN1Q9GZU1 580 aa18.31■□□□□ 0.52
CPSF7-207ENST00000449811 SAPCD2Q86UD0 394 aa18.3■□□□□ 0.52
CPSF7-207ENST00000449811 ADARB2Q9NS39 739 aaKnown RBP18.3■□□□□ 0.52
CPSF7-207ENST00000449811 NPC1L1Q9UHC9 1359 aa18.3■□□□□ 0.52
CPSF7-207ENST00000449811 TCERG1O14776 1098 aaKnown RBP18.29■□□□□ 0.52
CPSF7-207ENST00000449811 PPEF1O14829 653 aaPredicted RBP18.29■□□□□ 0.52
CPSF7-207ENST00000449811 CELF2O95319 508 aaKnown RBP18.29■□□□□ 0.52
CPSF7-207ENST00000449811 NGEFQ8N5V2 710 aa18.29■□□□□ 0.52
CPSF7-207ENST00000449811 RBM17Q96I25 401 aaKnown RBP18.29■□□□□ 0.52
CPSF7-207ENST00000449811 GPRC5DQ9NZD1 345 aa18.29■□□□□ 0.52
CPSF7-207ENST00000449811 RIC1Q4ADV7 1423 aa18.29■□□□□ 0.52
CPSF7-207ENST00000449811 ERVV-1B6SEH8 477 aa18.28■□□□□ 0.52
CPSF7-207ENST00000449811 PPIP5K2O43314 1243 aa18.28■□□□□ 0.52
CPSF7-207ENST00000449811 DCTN1Q14203 1278 aa18.28■□□□□ 0.52
CPSF7-207ENST00000449811 SLC51AQ86UW1 340 aa18.28■□□□□ 0.52
CPSF7-207ENST00000449811 HHIPL1Q96JK4 782 aa18.28■□□□□ 0.52
CPSF7-207ENST00000449811 MAP3K15Q6ZN16 1313 aa18.27■□□□□ 0.52
CPSF7-207ENST00000449811 BRPF1P55201 1214 aaPredicted RBP18.27■□□□□ 0.52
CPSF7-207ENST00000449811 CFAP53Q96M91 514 aa18.27■□□□□ 0.52
CPSF7-207ENST00000449811 CRAMP1Q96RY5 1269 aa18.27■□□□□ 0.52
CPSF7-207ENST00000449811 IBTKQ9P2D0 1353 aaPredicted RBP18.27■□□□□ 0.51
CPSF7-207ENST00000449811 GPTP24298 496 aa18.26■□□□□ 0.51
CPSF7-207ENST00000449811 DGKZQ13574 1117 aa18.26■□□□□ 0.51
CPSF7-207ENST00000449811 AOC3Q16853 763 aa18.26■□□□□ 0.51
CPSF7-207ENST00000449811 GLIS2Q9BZE0 524 aaPredicted RBP18.26■□□□□ 0.51
CPSF7-207ENST00000449811 NUDCQ9Y266 331 aa18.26■□□□□ 0.51
CPSF7-207ENST00000449811 UBN2Q6ZU65 1347 aa18.25■□□□□ 0.51
CPSF7-207ENST00000449811 CXCL9Q07325 125 aa18.25■□□□□ 0.51
CPSF7-207ENST00000449811 TAF7Q15545 349 aaPredicted RBP18.25■□□□□ 0.51
CPSF7-207ENST00000449811 KIF6Q6ZMV9 814 aa18.25■□□□□ 0.51
CPSF7-207ENST00000449811 TMX4Q9H1E5 349 aaPredicted RBP18.25■□□□□ 0.51
CPSF7-207ENST00000449811 ZNF408Q9H9D4 720 aa18.25■□□□□ 0.51
CPSF7-207ENST00000449811 LAMB4A4D0S4 1761 aa18.25■□□□□ 0.51
CPSF7-207ENST00000449811 HTATSF1O43719 755 aaKnown RBP18.24■□□□□ 0.51
CPSF7-207ENST00000449811 U2AF1L5P0DN76 240 aaPredicted RBP18.24■□□□□ 0.51
CPSF7-207ENST00000449811 GMPSP49915 693 aaPredicted RBP18.24■□□□□ 0.51
CPSF7-207ENST00000449811 U2AF1Q01081 240 aaKnown RBP eCLIP18.24■□□□□ 0.51
CPSF7-207ENST00000449811 SUSD4Q5VX71 490 aa18.24■□□□□ 0.51
CPSF7-207ENST00000449811 CIAPIN1Q6FI81 312 aa18.24■□□□□ 0.51
CPSF7-207ENST00000449811 TTLL7Q6ZT98 887 aa18.24■□□□□ 0.51
CPSF7-207ENST00000449811 VPS33BQ9H267 617 aa18.24■□□□□ 0.51
CPSF7-207ENST00000449811 MIS18AQ9NYP9 233 aa18.24■□□□□ 0.51
CPSF7-207ENST00000449811 ZNRF3Q9ULT6 936 aa18.24■□□□□ 0.51
CPSF7-207ENST00000449811 NUP98P52948 1817 aa18.23■□□□□ 0.51
CPSF7-207ENST00000449811 C3orf67Q6ZVT6 689 aa18.23■□□□□ 0.51
CPSF7-207ENST00000449811 ZBTB3Q9H5J0 574 aa18.23■□□□□ 0.51
CPSF7-207ENST00000449811 PGAP2Q9UHJ9 254 aa18.23■□□□□ 0.51
CPSF7-207ENST00000449811 RRP7AQ9Y3A4 280 aaKnown RBP18.23■□□□□ 0.51
CPSF7-207ENST00000449811 CASP8AP2Q9UKL3 1982 aa18.22■□□□□ 0.51
CPSF7-207ENST00000449811 NTSR2O95665 410 aa18.22■□□□□ 0.51
CPSF7-207ENST00000449811 SUPT20HQ8NEM7 779 aa18.22■□□□□ 0.51
CPSF7-207ENST00000449811 ATP6V0A2Q9Y487 856 aa18.22■□□□□ 0.51
CPSF7-207ENST00000449811 TNRC18O15417 2968 aaPredicted RBP18.21■□□□□ 0.51
CPSF7-207ENST00000449811 MYL6BP14649 208 aa18.21■□□□□ 0.51
CPSF7-207ENST00000449811 ZNF34Q8IZ26 560 aa18.21■□□□□ 0.51
CPSF7-207ENST00000449811 ZC3H15Q8WU90 426 aaKnown RBP18.21■□□□□ 0.51
CPSF7-207ENST00000449811 NLRP3Q96P20 1036 aa18.21■□□□□ 0.51
CPSF7-207ENST00000449811 BCL2L13Q9BXK5 485 aa18.21■□□□□ 0.51
CPSF7-207ENST00000449811 CDHR2Q9BYE9 1310 aa18.21■□□□□ 0.51
CPSF7-207ENST00000449811 NOGQ13253 232 aa18.2■□□□□ 0.5
CPSF7-207ENST00000449811 CDC37L1Q7L3B6 337 aa18.2■□□□□ 0.5
CPSF7-207ENST00000449811 HIRAP54198 1017 aaPredicted RBP18.19■□□□□ 0.5
CPSF7-207ENST00000449811 PPP1R42Q7Z4L9 355 aa18.19■□□□□ 0.5
CPSF7-207ENST00000449811 PNISRQ8TF01 805 aaKnown RBP18.19■□□□□ 0.5
CPSF7-207ENST00000449811 ZIC5Q96T25 663 aa18.19■□□□□ 0.5
CPSF7-207ENST00000449811 RTFDC1Q9BY42 306 aaPredicted RBP18.19■□□□□ 0.5
CPSF7-207ENST00000449811 ABCC4O15439 1325 aa18.19■□□□□ 0.5
CPSF7-207ENST00000449811 RAD17O75943 681 aa18.18■□□□□ 0.5
CPSF7-207ENST00000449811 HUNKP57058 714 aa18.18■□□□□ 0.5
CPSF7-207ENST00000449811 TNIP1Q15025 636 aa18.18■□□□□ 0.5
CPSF7-207ENST00000449811 DPP8Q6V1X1 898 aaPredicted RBP18.18■□□□□ 0.5
CPSF7-207ENST00000449811 GIGYF2Q6Y7W6 1299 aaKnown RBP18.18■□□□□ 0.5
CPSF7-207ENST00000449811 TRPM4Q8TD43 1214 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms