RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 UTP14AQ9BVJ6 771 aaKnown RBP23.16■■□□□ 1.3
RFTN1-205ENST00000449415 KLRG2A4D1S0 409 aaPredicted RBP23.15■■□□□ 1.3
RFTN1-205ENST00000449415 ATP5J2-PTCD1G3V325 749 aa23.15■■□□□ 1.3
RFTN1-205ENST00000449415 GOLGA2Q08379 1002 aa23.15■■□□□ 1.3
RFTN1-205ENST00000449415 DIEXFQ68CQ4 756 aaKnown RBP23.15■■□□□ 1.3
RFTN1-205ENST00000449415 PRPF40BQ6NWY9 871 aaKnown RBP23.15■■□□□ 1.3
RFTN1-205ENST00000449415 RIC3Q7Z5B4 369 aa23.15■■□□□ 1.3
RFTN1-205ENST00000449415 ZNF526Q8TF50 670 aaPredicted RBP23.15■■□□□ 1.3
RFTN1-205ENST00000449415 ADCY9O60503 1353 aa23.14■■□□□ 1.3
RFTN1-205ENST00000449415 EXOSC9Q06265 439 aaKnown RBP23.14■■□□□ 1.29
RFTN1-205ENST00000449415 C9orf131Q5VYM1 1079 aa23.14■■□□□ 1.29
RFTN1-205ENST00000449415 CHMP4AQ9BY43 222 aa23.14■■□□□ 1.29
RFTN1-205ENST00000449415 STK31Q9BXU1 1019 aa23.13■■□□□ 1.29
RFTN1-205ENST00000449415 C3orf67Q6ZVT6 689 aa23.12■■□□□ 1.29
RFTN1-205ENST00000449415 SYNE4Q8N205 404 aa23.12■■□□□ 1.29
RFTN1-205ENST00000449415 RNF181Q9P0P0 153 aa23.12■■□□□ 1.29
RFTN1-205ENST00000449415 TRMT112Q9UI30 125 aaKnown RBP23.12■■□□□ 1.29
RFTN1-205ENST00000449415 LAMB2P55268 1798 aa23.12■■□□□ 1.29
RFTN1-205ENST00000449415 FER1L6Q2WGJ9 1857 aa23.11■■□□□ 1.29
RFTN1-205ENST00000449415 MYH16Q9H6N6 1097 aa23.11■■□□□ 1.29
RFTN1-205ENST00000449415 CRY2Q49AN0 593 aa23.1■■□□□ 1.29
RFTN1-205ENST00000449415 MIER1Q8N108 512 aa23.1■■□□□ 1.29
RFTN1-205ENST00000449415 RPGRQ92834 1020 aaKnown RBP23.1■■□□□ 1.29
RFTN1-205ENST00000449415 ISCA1Q9BUE6 129 aa23.1■■□□□ 1.29
RFTN1-205ENST00000449415 ZNF521Q96K83 1311 aa23.09■■□□□ 1.29
RFTN1-205ENST00000449415 RIC1Q4ADV7 1423 aa23.09■■□□□ 1.29
RFTN1-205ENST00000449415 NFKBIEO00221 500 aa23.09■■□□□ 1.29
RFTN1-205ENST00000449415 SLC4A2P04920 1241 aa23.09■■□□□ 1.29
RFTN1-205ENST00000449415 HCLS1P14317 486 aaPredicted RBP23.09■■□□□ 1.29
RFTN1-205ENST00000449415 G2E3Q7L622 706 aa23.09■■□□□ 1.29
RFTN1-205ENST00000449415 NLRP3Q96P20 1036 aa23.09■■□□□ 1.29
RFTN1-205ENST00000449415 MYD88Q99836 296 aa23.09■■□□□ 1.29
RFTN1-205ENST00000449415 VAMP4O75379 141 aa23.08■■□□□ 1.29
RFTN1-205ENST00000449415 DDX58O95786 925 aaKnown RBP23.08■■□□□ 1.29
RFTN1-205ENST00000449415 ALDH1B1P30837 517 aa23.08■■□□□ 1.29
RFTN1-205ENST00000449415 PRELPP51888 382 aa23.08■■□□□ 1.29
RFTN1-205ENST00000449415 CACNA1FO60840 1977 aa23.08■■□□□ 1.29
RFTN1-205ENST00000449415 SH3TC1Q8TE82 1336 aa23.08■■□□□ 1.28
RFTN1-205ENST00000449415 RTL5Q5HYW3 569 aaPredicted RBP23.07■■□□□ 1.28
RFTN1-205ENST00000449415 SLC10A5Q5PT55 438 aa23.07■■□□□ 1.28
RFTN1-205ENST00000449415 OLFM4Q6UX06 510 aa23.07■■□□□ 1.28
RFTN1-205ENST00000449415 GPBP1L1Q9HC44 474 aaPredicted RBP23.07■■□□□ 1.28
RFTN1-205ENST00000449415 RNF123Q5XPI4 1314 aa23.07■■□□□ 1.28
RFTN1-205ENST00000449415 DDX60Q8IY21 1712 aaKnown RBP23.06■■□□□ 1.28
RFTN1-205ENST00000449415 C7orf43Q8WVR3 580 aa23.06■■□□□ 1.28
RFTN1-205ENST00000449415 FAM89AQ96GI7 184 aa23.06■■□□□ 1.28
RFTN1-205ENST00000449415 RBM17Q96I25 401 aaKnown RBP23.06■■□□□ 1.28
RFTN1-205ENST00000449415 MAP3K2Q9Y2U5 619 aa23.06■■□□□ 1.28
RFTN1-205ENST00000449415 LMNB1P20700 586 aa23.05■■□□□ 1.28
RFTN1-205ENST00000449415 TIAM2Q8IVF5 1701 aa23.05■■□□□ 1.28
RFTN1-205ENST00000449415 PI4KAP2A4QPH2 592 aa23.04■■□□□ 1.28
RFTN1-205ENST00000449415 HOXA10P31260 410 aaPredicted RBP23.04■■□□□ 1.28
RFTN1-205ENST00000449415 CCDC93Q567U6 631 aa23.04■■□□□ 1.28
RFTN1-205ENST00000449415 SOGA3Q5TF21 947 aa23.04■■□□□ 1.28
RFTN1-205ENST00000449415 KSR2Q6VAB6 950 aa23.04■■□□□ 1.28
RFTN1-205ENST00000449415 PI4KAP1Q8N8J0 262 aa23.04■■□□□ 1.28
RFTN1-205ENST00000449415 METTL22Q9BUU2 404 aaPredicted RBP23.04■■□□□ 1.28
RFTN1-205ENST00000449415 TAOK3Q9H2K8 898 aa23.04■■□□□ 1.28
RFTN1-205ENST00000449415 TAF1P21675 1872 aa23.04■■□□□ 1.28
RFTN1-205ENST00000449415 TRIM28Q13263 835 aaKnown RBP23.03■■□□□ 1.28
RFTN1-205ENST00000449415 DICER1Q9UPY3 1922 aaKnown RBP23.03■■□□□ 1.28
RFTN1-205ENST00000449415 FLIIQ13045 1269 aa23.02■■□□□ 1.28
RFTN1-205ENST00000449415 SLC51AQ86UW1 340 aa23.02■■□□□ 1.28
RFTN1-205ENST00000449415 JARID2Q92833 1246 aaPredicted RBP23.02■■□□□ 1.28
RFTN1-205ENST00000449415 CRAMP1Q96RY5 1269 aa23.02■■□□□ 1.28
RFTN1-205ENST00000449415 PPEF1O14829 653 aaPredicted RBP23■■□□□ 1.27
RFTN1-205ENST00000449415 FKBP5Q13451 457 aaPredicted RBP23■■□□□ 1.27
RFTN1-205ENST00000449415 CWC25Q9NXE8 425 aaPredicted RBP23■■□□□ 1.27
RFTN1-205ENST00000449415 E9PSI1 815 aa22.99■■□□□ 1.27
RFTN1-205ENST00000449415 IRS4O14654 1257 aaPredicted RBP22.99■■□□□ 1.27
RFTN1-205ENST00000449415 CCDC191Q8NCU4 936 aa22.99■■□□□ 1.27
RFTN1-205ENST00000449415 CDCA7LQ96GN5 454 aa22.99■■□□□ 1.27
RFTN1-205ENST00000449415 ABCC4O15439 1325 aa22.99■■□□□ 1.27
RFTN1-205ENST00000449415 LTBP3Q9NS15 1303 aa22.99■■□□□ 1.27
RFTN1-205ENST00000449415 SLFN5Q08AF3 891 aa22.98■■□□□ 1.27
RFTN1-205ENST00000449415 NEXNQ0ZGT2 675 aa22.98■■□□□ 1.27
RFTN1-205ENST00000449415 DDX46Q7L014 1031 aaKnown RBP22.98■■□□□ 1.27
RFTN1-205ENST00000449415 ZBTB38Q8NAP3 1195 aaPredicted RBP22.98■■□□□ 1.27
RFTN1-205ENST00000449415 IGKV5-2P06315 115 aa22.97■■□□□ 1.27
RFTN1-205ENST00000449415 FKBP4Q02790 459 aaKnown RBP eCLIP22.97■■□□□ 1.27
RFTN1-205ENST00000449415 CWF19L2Q2TBE0 894 aaKnown RBP22.97■■□□□ 1.27
RFTN1-205ENST00000449415 RTKN2Q8IZC4 609 aa22.97■■□□□ 1.27
RFTN1-205ENST00000449415 ZNF277Q9NRM2 450 aaPredicted RBP22.97■■□□□ 1.27
RFTN1-205ENST00000449415 PCCAP05165 728 aaPredicted RBP22.96■■□□□ 1.27
RFTN1-205ENST00000449415 NMRK2Q9NPI5 230 aa22.96■■□□□ 1.27
RFTN1-205ENST00000449415 DNAAF4Q8WXU2 420 aa22.95■■□□□ 1.26
RFTN1-205ENST00000449415 KDM2BQ8NHM5 1336 aa22.94■■□□□ 1.26
RFTN1-205ENST00000449415 ZC3H4Q9UPT8 1303 aaKnown RBP22.93■■□□□ 1.26
RFTN1-205ENST00000449415 NEURL1BA8MQ27 555 aa22.93■■□□□ 1.26
RFTN1-205ENST00000449415 F6X3S4 739 aa22.93■■□□□ 1.26
RFTN1-205ENST00000449415 GRAPQ13588 217 aa22.93■■□□□ 1.26
RFTN1-205ENST00000449415 SF3B3Q15393 1217 aaKnown RBP22.93■■□□□ 1.26
RFTN1-205ENST00000449415 CC2D2BQ6DHV5 1058 aa22.93■■□□□ 1.26
RFTN1-205ENST00000449415 GRAPLQ8TC17 118 aaPredicted RBP22.93■■□□□ 1.26
RFTN1-205ENST00000449415 TMX4Q9H1E5 349 aaPredicted RBP22.93■■□□□ 1.26
RFTN1-205ENST00000449415 ATP6V0A2Q9Y487 856 aa22.93■■□□□ 1.26
RFTN1-205ENST00000449415 SNED1Q8TER0 1413 aa22.92■■□□□ 1.26
RFTN1-205ENST00000449415 KIF3CO14782 793 aa22.92■■□□□ 1.26
RFTN1-205ENST00000449415 C1QTNF8P60827 252 aa22.92■■□□□ 1.26
RFTN1-205ENST00000449415 CCDC85AQ96PX6 553 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms