RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 RNF123Q5XPI4 1314 aa14.1□□□□□ -0.15
SRRT-205ENST00000449389 KRT24Q2M2I5 525 aa14.09□□□□□ -0.15
SRRT-205ENST00000449389 OLFM4Q6UX06 510 aa14.09□□□□□ -0.15
SRRT-205ENST00000449389 COPS6Q7L5N1 327 aa14.09□□□□□ -0.15
SRRT-205ENST00000449389 DNAJC5GQ8N7S2 189 aa14.09□□□□□ -0.15
SRRT-205ENST00000449389 XAGE3Q8WTP9 111 aa14.09□□□□□ -0.15
SRRT-205ENST00000449389 RBM17Q96I25 401 aaKnown RBP14.09□□□□□ -0.15
SRRT-205ENST00000449389 CFAP44Q96MT7 982 aa14.09□□□□□ -0.15
SRRT-205ENST00000449389 UTP14AQ9BVJ6 771 aaKnown RBP14.09□□□□□ -0.15
SRRT-205ENST00000449389 ZNF277Q9NRM2 450 aaPredicted RBP14.09□□□□□ -0.15
SRRT-205ENST00000449389 DDNO94850 711 aaPredicted RBP14.08□□□□□ -0.16
SRRT-205ENST00000449389 AIMP1Q12904 312 aaKnown RBP14.08□□□□□ -0.16
SRRT-205ENST00000449389 GRIPAP1Q4V328 841 aa14.08□□□□□ -0.16
SRRT-205ENST00000449389 HDGFL1Q5TGJ6 251 aa14.08□□□□□ -0.16
SRRT-205ENST00000449389 NLRP3Q96P20 1036 aa14.08□□□□□ -0.16
SRRT-205ENST00000449389 CRAMP1Q96RY5 1269 aa14.08□□□□□ -0.16
SRRT-205ENST00000449389 PSMD1Q99460 953 aa14.08□□□□□ -0.16
SRRT-205ENST00000449389 SNED1Q8TER0 1413 aa14.07□□□□□ -0.16
SRRT-205ENST00000449389 IQCA1LA6NCM1 817 aa14.07□□□□□ -0.16
SRRT-205ENST00000449389 IARSP41252 1262 aaKnown RBP14.07□□□□□ -0.16
SRRT-205ENST00000449389 CALD1Q05682 793 aaKnown RBP14.07□□□□□ -0.16
SRRT-205ENST00000449389 SLC10A5Q5PT55 438 aa14.07□□□□□ -0.16
SRRT-205ENST00000449389 SYNE4Q8N205 404 aa14.07□□□□□ -0.16
SRRT-205ENST00000449389 L3MBTL3Q96JM7 780 aaPredicted RBP14.07□□□□□ -0.16
SRRT-205ENST00000449389 CHPF2Q9P2E5 772 aa14.07□□□□□ -0.16
SRRT-205ENST00000449389 APAF1O14727 1248 aa14.06□□□□□ -0.16
SRRT-205ENST00000449389 PPEF1O14829 653 aaPredicted RBP14.06□□□□□ -0.16
SRRT-205ENST00000449389 TCIRG1Q13488 830 aa14.06□□□□□ -0.16
SRRT-205ENST00000449389 C3orf67Q6ZVT6 689 aa14.06□□□□□ -0.16
SRRT-205ENST00000449389 NLRP10Q86W26 655 aa14.06□□□□□ -0.16
SRRT-205ENST00000449389 KLRG1Q96E93 195 aa14.06□□□□□ -0.16
SRRT-205ENST00000449389 DBF4Q9UBU7 674 aaPredicted RBP14.06□□□□□ -0.16
SRRT-205ENST00000449389 ZNF853P0CG23 659 aa14.05□□□□□ -0.16
SRRT-205ENST00000449389 ZEB1P37275 1124 aaPredicted RBP14.05□□□□□ -0.16
SRRT-205ENST00000449389 GNAI1P63096 354 aa14.05□□□□□ -0.16
SRRT-205ENST00000449389 HTRA3P83110 453 aa14.05□□□□□ -0.16
SRRT-205ENST00000449389 DUSP27Q5VZP5 1158 aa14.05□□□□□ -0.16
SRRT-205ENST00000449389 JDP2Q8WYK2 163 aa14.05□□□□□ -0.16
SRRT-205ENST00000449389 MBIPQ9NS73 344 aa14.05□□□□□ -0.16
SRRT-205ENST00000449389 IFT57Q9NWB7 429 aa14.05□□□□□ -0.16
SRRT-205ENST00000449389 ZNF541Q9H0D2 1346 aa14.05□□□□□ -0.16
SRRT-205ENST00000449389 ANKRD36CQ5JPF3 1778 aa14.04□□□□□ -0.16
SRRT-205ENST00000449389 FZD9O00144 591 aa14.04□□□□□ -0.16
SRRT-205ENST00000449389 CHADLQ6NUI6 762 aa14.04□□□□□ -0.16
SRRT-205ENST00000449389 PLBD2Q8NHP8 589 aa14.04□□□□□ -0.16
SRRT-205ENST00000449389 TMX4Q9H1E5 349 aaPredicted RBP14.04□□□□□ -0.16
SRRT-205ENST00000449389 HYPKQ9NX55 129 aa14.04□□□□□ -0.16
SRRT-205ENST00000449389 TRMT112Q9UI30 125 aaKnown RBP14.04□□□□□ -0.16
SRRT-205ENST00000449389 SH3TC1Q8TE82 1336 aa14.04□□□□□ -0.16
SRRT-205ENST00000449389 ANKRD13DQ6ZTN6 518 aa14.03□□□□□ -0.16
SRRT-205ENST00000449389 TAF1DQ9H5J8 278 aaPredicted RBP14.03□□□□□ -0.16
SRRT-205ENST00000449389 ABCC4O15439 1325 aa14.02□□□□□ -0.17
SRRT-205ENST00000449389 TCERG1O14776 1098 aaKnown RBP14.02□□□□□ -0.17
SRRT-205ENST00000449389 HCLS1P14317 486 aaPredicted RBP14.02□□□□□ -0.17
SRRT-205ENST00000449389 LDHDQ86WU2 507 aa14.02□□□□□ -0.17
SRRT-205ENST00000449389 GPC2Q8N158 579 aa14.02□□□□□ -0.17
SRRT-205ENST00000449389 HACL1Q9UJ83 578 aa14.02□□□□□ -0.17
SRRT-205ENST00000449389 ATP6V0A2Q9Y487 856 aa14.02□□□□□ -0.17
SRRT-205ENST00000449389 SCN4AP35499 1836 aa14.01□□□□□ -0.17
SRRT-205ENST00000449389 BBOX1O75936 387 aa14.01□□□□□ -0.17
SRRT-205ENST00000449389 POTEIP0CG38 1075 aa14.01□□□□□ -0.17
SRRT-205ENST00000449389 POTEJP0CG39 1038 aa14.01□□□□□ -0.17
SRRT-205ENST00000449389 EIF6P56537 245 aaKnown RBP14.01□□□□□ -0.17
SRRT-205ENST00000449389 LARGE2Q8N3Y3 721 aa14.01□□□□□ -0.17
SRRT-205ENST00000449389 JMYQ8N9B5 988 aa14.01□□□□□ -0.17
SRRT-205ENST00000449389 ISCA1Q9BUE6 129 aa14.01□□□□□ -0.17
SRRT-205ENST00000449389 DDX46Q7L014 1031 aaKnown RBP14□□□□□ -0.17
SRRT-205ENST00000449389 SUPT20HQ8NEM7 779 aa14□□□□□ -0.17
SRRT-205ENST00000449389 CHMP4AQ9BY43 222 aa14□□□□□ -0.17
SRRT-205ENST00000449389 VPS33BQ9H267 617 aa14□□□□□ -0.17
SRRT-205ENST00000449389 COL4A5P29400 1685 aa13.99□□□□□ -0.17
SRRT-205ENST00000449389 EPHX2P34913 555 aa13.99□□□□□ -0.17
SRRT-205ENST00000449389 GOLGA2Q08379 1002 aa13.99□□□□□ -0.17
SRRT-205ENST00000449389 TRIM28Q13263 835 aaKnown RBP13.99□□□□□ -0.17
SRRT-205ENST00000449389 GRAPQ13588 217 aa13.99□□□□□ -0.17
SRRT-205ENST00000449389 SLC51AQ86UW1 340 aa13.99□□□□□ -0.17
SRRT-205ENST00000449389 PNMA8AQ86V59 439 aaPredicted RBP13.99□□□□□ -0.17
SRRT-205ENST00000449389 SP8Q8IXZ3 490 aa13.99□□□□□ -0.17
SRRT-205ENST00000449389 NIM1KQ8IY84 436 aa13.99□□□□□ -0.17
SRRT-205ENST00000449389 GRAPLQ8TC17 118 aaPredicted RBP13.99□□□□□ -0.17
SRRT-205ENST00000449389 ATP5J2-PTCD1G3V325 749 aa13.98□□□□□ -0.17
SRRT-205ENST00000449389 ELL2O00472 640 aaPredicted RBP13.98□□□□□ -0.17
SRRT-205ENST00000449389 PPIP5K2O43314 1243 aa13.98□□□□□ -0.17
SRRT-205ENST00000449389 EAPPQ56P03 285 aaPredicted RBP13.98□□□□□ -0.17
SRRT-205ENST00000449389 DPP8Q6V1X1 898 aaPredicted RBP13.98□□□□□ -0.17
SRRT-205ENST00000449389 TMC4Q7Z404 712 aa13.98□□□□□ -0.17
SRRT-205ENST00000449389 RTFDC1Q9BY42 306 aaPredicted RBP13.98□□□□□ -0.17
SRRT-205ENST00000449389 GJA3Q9Y6H8 435 aa13.98□□□□□ -0.17
SRRT-205ENST00000449389 LAMB2P55268 1798 aa13.97□□□□□ -0.17
SRRT-205ENST00000449389 LMOD1P29536 600 aaPredicted RBP13.97□□□□□ -0.17
SRRT-205ENST00000449389 CCDC27Q2M243 656 aa13.97□□□□□ -0.17
SRRT-205ENST00000449389 CCDC184Q52MB2 194 aa13.97□□□□□ -0.17
SRRT-205ENST00000449389 RIC3Q7Z5B4 369 aa13.97□□□□□ -0.17
SRRT-205ENST00000449389 MPNDQ8N594 471 aa13.97□□□□□ -0.17
SRRT-205ENST00000449389 C8orf58Q8NAV2 365 aa13.97□□□□□ -0.17
SRRT-205ENST00000449389 FAM89AQ96GI7 184 aa13.97□□□□□ -0.17
SRRT-205ENST00000449389 CREBZFQ9NS37 354 aa13.97□□□□□ -0.17
SRRT-205ENST00000449389 PASKQ96RG2 1323 aa13.96□□□□□ -0.17
SRRT-205ENST00000449389 SF3B3Q15393 1217 aaKnown RBP13.96□□□□□ -0.17
SRRT-205ENST00000449389 AOC3Q16853 763 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms