RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 NAPBQ9H115 298 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 USP19O94966 1318 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 CCP110O43303 1012 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 CFAP100Q494V2 611 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 FAM173BQ6P4H8 233 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 CWC25Q9NXE8 425 aaPredicted RBP8.36□□□□□ -1.07
BEST1-202ENST00000449131 ERICH4A6NGS2 130 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 GOLGA8BA8MQT2 603 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 LDHAL6AQ6ZMR3 332 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 PPFIBP1Q86W92 1011 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 TRMT2AQ8IZ69 625 aaKnown RBP8.36□□□□□ -1.07
BEST1-202ENST00000449131 FSIP1Q8NA03 581 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 PDCL3Q9H2J4 239 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 DDX19AQ9NUU7 478 aaKnown RBP8.36□□□□□ -1.07
BEST1-202ENST00000449131 ANO10Q9NW15 660 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 CROCC2H7BZ55 1655 aa8.36□□□□□ -1.07
BEST1-202ENST00000449131 ZMYM3Q14202 1370 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 KCNA6P17658 529 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 ISM2Q6H9L7 571 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 LMBR1LQ6UX01 489 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 LINS1Q8NG48 757 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 SMARCE1Q969G3 411 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 ZFYVE16Q7Z3T8 1539 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 SMTNL1A8MU46 457 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 OFD1O75665 1012 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 HOXC9P31274 260 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 IKQ13123 557 aaPredicted RBP8.35□□□□□ -1.07
BEST1-202ENST00000449131 DACH1Q9UI36 760 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 NOL7Q9UMY1 257 aaKnown RBP8.35□□□□□ -1.07
BEST1-202ENST00000449131 SOS1Q07889 1333 aaPredicted RBP8.35□□□□□ -1.07
BEST1-202ENST00000449131 CBFA2T2O43439 604 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 ZNF165P49910 485 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 AK2P54819 239 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 HSP90B2PQ58FF3 399 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 HMG20BQ9P0W2 317 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 TCEAL9Q9UHQ7 104 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 USP16Q9Y5T5 823 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 ZNF521Q96K83 1311 aa8.35□□□□□ -1.07
BEST1-202ENST00000449131 ATP2B2Q01814 1243 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 DNM1Q05193 864 aaKnown RBP8.34□□□□□ -1.07
BEST1-202ENST00000449131 PDCL2Q8N4E4 241 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 WASF1Q92558 559 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 CDK5RAP3Q96JB5 506 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 MAGEC2Q9UBF1 373 aaPredicted RBP8.34□□□□□ -1.07
BEST1-202ENST00000449131 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.34□□□□□ -1.07
BEST1-202ENST00000449131 V9GYY5 206 aaPredicted RBP8.34□□□□□ -1.07
BEST1-202ENST00000449131 BCORL1Q5H9F3 1711 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 MAP3K5Q99683 1374 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 ANKRD18BA2A2Z9 1011 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 BIN1O00499 593 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 POLR3DP05423 398 aaPredicted RBP8.34□□□□□ -1.07
BEST1-202ENST00000449131 NMIQ13287 307 aaPredicted RBP8.34□□□□□ -1.07
BEST1-202ENST00000449131 NFATC2IPQ8NCF5 419 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 TMX1Q9H3N1 280 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 ANTXR1Q9H6X2 564 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 CLIP2Q9UDT6 1046 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 EDC4Q6P2E9 1401 aaKnown RBP8.34□□□□□ -1.07
BEST1-202ENST00000449131 MAP3K12Q12852 859 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 CAGE1Q8TC20 777 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 ORC3Q9UBD5 711 aaPredicted RBP8.34□□□□□ -1.07
BEST1-202ENST00000449131 CTDP1Q9Y5B0 961 aaPredicted RBP8.34□□□□□ -1.07
BEST1-202ENST00000449131 IFIT3O14879 490 aaKnown RBP8.34□□□□□ -1.07
BEST1-202ENST00000449131 SFPQP23246 707 aaKnown RBP eCLIP8.34□□□□□ -1.07
BEST1-202ENST00000449131 DHX8Q14562 1220 aaKnown RBP8.34□□□□□ -1.07
BEST1-202ENST00000449131 PPP4R3BQ5MIZ7 849 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 WDR70Q9NW82 654 aa8.34□□□□□ -1.07
BEST1-202ENST00000449131 GADD45BO75293 160 aaPredicted RBP8.33□□□□□ -1.08
BEST1-202ENST00000449131 F13A1P00488 732 aa8.33□□□□□ -1.08
BEST1-202ENST00000449131 GCP02774 474 aa8.33□□□□□ -1.08
BEST1-202ENST00000449131 CCDC144CPQ8IYA2 1237 aa8.33□□□□□ -1.08
BEST1-202ENST00000449131 CABLES1Q8TDN4 633 aa8.33□□□□□ -1.08
BEST1-202ENST00000449131 PRDM15P57071 1507 aaPredicted RBP8.33□□□□□ -1.08
BEST1-202ENST00000449131 PNMA6EA0A0J9YXQ4 647 aa8.33□□□□□ -1.08
BEST1-202ENST00000449131 CTAGE5O15320 804 aa8.33□□□□□ -1.08
BEST1-202ENST00000449131 EPS15P42566 896 aa8.33□□□□□ -1.08
BEST1-202ENST00000449131 PTPN14Q15678 1187 aa8.33□□□□□ -1.08
BEST1-202ENST00000449131 SBNO2Q9Y2G9 1366 aa8.33□□□□□ -1.08
BEST1-202ENST00000449131 GSPT1P15170 499 aaKnown RBP8.33□□□□□ -1.08
BEST1-202ENST00000449131 UVSSAQ2YD98 709 aa8.33□□□□□ -1.08
BEST1-202ENST00000449131 HSP90AB3PQ58FF7 597 aa8.33□□□□□ -1.08
BEST1-202ENST00000449131 CCAR1Q8IX12 1150 aaKnown RBP8.33□□□□□ -1.08
BEST1-202ENST00000449131 CCDC43Q96MW1 224 aaKnown RBP8.33□□□□□ -1.08
BEST1-202ENST00000449131 TTC41PQ6P2S7 1318 aa8.33□□□□□ -1.08
BEST1-202ENST00000449131 KAT6BQ8WYB5 2073 aa8.33□□□□□ -1.08
BEST1-202ENST00000449131 ERVK-7P63135 1459 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 GOLGA8AA7E2F4 631 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 KLHL10Q6JEL2 608 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 MICU3Q86XE3 530 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 ACBD3Q9H3P7 528 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 TMEM63CQ9P1W3 806 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 ZKSCAN5Q9Y2L8 839 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 TBX22Q9Y458 520 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 SLC12A7Q9Y666 1083 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 VASPP50552 380 aaPredicted RBP8.32□□□□□ -1.08
BEST1-202ENST00000449131 IP6K1Q92551 441 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 KDM5DQ9BY66 1539 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 MCM5P33992 734 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 STIM1Q13586 685 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 MCMDC2Q4G0Z9 681 aa8.32□□□□□ -1.08
BEST1-202ENST00000449131 HSP90AA4PQ58FG1 418 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms