RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 TSPYL1Q9H0U9 437 aa11.79□□□□□ -0.52
SCN10A-201ENST00000449082 SYCP2Q9BX26 1530 aa11.79□□□□□ -0.52
SCN10A-201ENST00000449082 RHPN1Q8TCX5 695 aa11.79□□□□□ -0.52
SCN10A-201ENST00000449082 KRT23Q9C075 422 aa11.79□□□□□ -0.52
SCN10A-201ENST00000449082 ASXL1Q8IXJ9 1541 aa11.79□□□□□ -0.52
SCN10A-201ENST00000449082 NUP160Q12769 1436 aa11.79□□□□□ -0.52
SCN10A-201ENST00000449082 HAND2P61296 217 aa11.79□□□□□ -0.52
SCN10A-201ENST00000449082 CETN1Q12798 172 aa11.79□□□□□ -0.52
SCN10A-201ENST00000449082 BMP2KLQ5H9B9 411 aa11.79□□□□□ -0.52
SCN10A-201ENST00000449082 ATP2B3Q16720 1220 aa11.79□□□□□ -0.52
SCN10A-201ENST00000449082 VSIG10Q8N0Z9 540 aa11.79□□□□□ -0.52
SCN10A-201ENST00000449082 NIP7Q9Y221 180 aaKnown RBP eCLIP11.79□□□□□ -0.52
SCN10A-201ENST00000449082 CYP7A1P22680 504 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 SFPQP23246 707 aaKnown RBP eCLIP11.78□□□□□ -0.52
SCN10A-201ENST00000449082 SLC39A6Q13433 755 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 TTC22Q5TAA0 569 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 CCDC144CPQ8IYA2 1237 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 MCM5P33992 734 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 KSR2Q6VAB6 950 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 ZNF804AQ7Z570 1209 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 OGFOD1Q8N543 542 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 CENPHQ9H3R5 247 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 MICU3Q86XE3 530 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 IL27Q8NEV9 243 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 LRRC27Q9C0I9 530 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 ORC3Q9UBD5 711 aaPredicted RBP11.78□□□□□ -0.52
SCN10A-201ENST00000449082 GRM8O00222 908 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 ZSCAN12O43309 604 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 TSPY3P0CV98 308 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 TSPY8P0CW00 308 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 FBLN1P23142 703 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 EZRP15311 586 aaKnown RBP11.78□□□□□ -0.52
SCN10A-201ENST00000449082 GJB2P29033 226 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 TMEM87AQ8NBN3 555 aa11.78□□□□□ -0.52
SCN10A-201ENST00000449082 IL15P40933 162 aaPredicted RBP11.77□□□□□ -0.52
SCN10A-201ENST00000449082 TBC1D9Q6ZT07 1266 aa11.77□□□□□ -0.52
SCN10A-201ENST00000449082 TAX1BP1Q86VP1 789 aa11.77□□□□□ -0.52
SCN10A-201ENST00000449082 FSIP1Q8NA03 581 aa11.77□□□□□ -0.52
SCN10A-201ENST00000449082 WTAPQ15007 396 aa11.77□□□□□ -0.52
SCN10A-201ENST00000449082 TMTC2Q8N394 836 aa11.77□□□□□ -0.52
SCN10A-201ENST00000449082 SLC26A6Q9BXS9 759 aa11.77□□□□□ -0.52
SCN10A-201ENST00000449082 FLT4P35916 1363 aa11.77□□□□□ -0.53
SCN10A-201ENST00000449082 TOP1P11387 765 aaKnown RBP11.77□□□□□ -0.53
SCN10A-201ENST00000449082 EIF4A2Q14240 407 aaKnown RBP11.77□□□□□ -0.53
SCN10A-201ENST00000449082 SLC4A8Q2Y0W8 1093 aa11.77□□□□□ -0.53
SCN10A-201ENST00000449082 CNNM2Q9H8M5 875 aa11.77□□□□□ -0.53
SCN10A-201ENST00000449082 SAMM50Q9Y512 469 aa11.77□□□□□ -0.53
SCN10A-201ENST00000449082 LIG1P18858 919 aa11.77□□□□□ -0.53
SCN10A-201ENST00000449082 DDX19AQ9NUU7 478 aaKnown RBP11.77□□□□□ -0.53
SCN10A-201ENST00000449082 RTCBQ9Y3I0 505 aaKnown RBP11.77□□□□□ -0.53
SCN10A-201ENST00000449082 KIF2AO00139 706 aaPredicted RBP11.77□□□□□ -0.53
SCN10A-201ENST00000449082 DZIP3Q86Y13 1208 aaKnown RBP11.77□□□□□ -0.53
SCN10A-201ENST00000449082 LRRC59Q96AG4 307 aaKnown RBP11.77□□□□□ -0.53
SCN10A-201ENST00000449082 SIRT1Q96EB6 747 aa11.77□□□□□ -0.53
SCN10A-201ENST00000449082 UBA7P41226 1012 aa11.76□□□□□ -0.53
SCN10A-201ENST00000449082 KANK3Q6NY19 840 aa11.76□□□□□ -0.53
SCN10A-201ENST00000449082 TPTE2Q6XPS3 522 aa11.76□□□□□ -0.53
SCN10A-201ENST00000449082 STX8Q9UNK0 236 aa11.76□□□□□ -0.53
SCN10A-201ENST00000449082 SLC4A4Q9Y6R1 1079 aa11.76□□□□□ -0.53
SCN10A-201ENST00000449082 ABCC10Q5T3U5 1492 aa11.76□□□□□ -0.53
SCN10A-201ENST00000449082 ESR2Q92731 530 aa11.76□□□□□ -0.53
SCN10A-201ENST00000449082 UGGT2Q9NYU1 1516 aa11.76□□□□□ -0.53
SCN10A-201ENST00000449082 NAA16Q6N069 864 aaPredicted RBP11.76□□□□□ -0.53
SCN10A-201ENST00000449082 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
SCN10A-201ENST00000449082 LMBR1LQ6UX01 489 aa11.76□□□□□ -0.53
SCN10A-201ENST00000449082 POLD1P28340 1107 aa11.76□□□□□ -0.53
SCN10A-201ENST00000449082 PUS7Q96PZ0 661 aaKnown RBP11.76□□□□□ -0.53
SCN10A-201ENST00000449082 NBPF7P0C2Y1 421 aaPredicted RBP11.75□□□□□ -0.53
SCN10A-201ENST00000449082 STX6O43752 255 aa11.75□□□□□ -0.53
SCN10A-201ENST00000449082 MTIF2P46199 727 aaKnown RBP11.75□□□□□ -0.53
SCN10A-201ENST00000449082 ANAPC15P60006 121 aa11.75□□□□□ -0.53
SCN10A-201ENST00000449082 IFIT1BQ5T764 474 aaKnown RBP11.75□□□□□ -0.53
SCN10A-201ENST00000449082 NBPF14Q5TI25 921 aa11.75□□□□□ -0.53
SCN10A-201ENST00000449082 FAM114A1Q8IWE2 563 aa11.75□□□□□ -0.53
SCN10A-201ENST00000449082 TRPM2O94759 1503 aa11.75□□□□□ -0.53
SCN10A-201ENST00000449082 KIF5CO60282 957 aa11.75□□□□□ -0.53
SCN10A-201ENST00000449082 IDEP14735 1019 aa11.75□□□□□ -0.53
SCN10A-201ENST00000449082 CABLES1Q8TDN4 633 aa11.75□□□□□ -0.53
SCN10A-201ENST00000449082 USO1O60763 962 aaKnown RBP11.75□□□□□ -0.53
SCN10A-201ENST00000449082 YEATS4O95619 227 aa11.75□□□□□ -0.53
SCN10A-201ENST00000449082 GNAQP50148 359 aa11.75□□□□□ -0.53
SCN10A-201ENST00000449082 SYCP3Q8IZU3 236 aa11.75□□□□□ -0.53
SCN10A-201ENST00000449082 LARP6Q9BRS8 491 aaKnown RBP11.75□□□□□ -0.53
SCN10A-201ENST00000449082 CCDC40Q4G0X9 1142 aa11.75□□□□□ -0.53
SCN10A-201ENST00000449082 NUP88Q99567 741 aaPredicted RBP11.75□□□□□ -0.53
SCN10A-201ENST00000449082 FAM193AP78312 1265 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 ERMNQ8TAM6 284 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 MEIS3Q99687 375 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 NCKAP5LQ9HCH0 1330 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 GOLGA6L7A0A1B0GV03 622 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 CCDC66A2RUB6 948 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 F8W031 263 aaPredicted RBP11.74□□□□□ -0.53
SCN10A-201ENST00000449082 TFCP2L1Q9NZI6 479 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 ABCC1P33527 1531 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 EIF2AK4Q9P2K8 1649 aaKnown RBP11.74□□□□□ -0.53
SCN10A-201ENST00000449082 KIAA0754O94854 1291 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 PRKCSHP14314 528 aaPredicted RBP11.74□□□□□ -0.53
SCN10A-201ENST00000449082 FERMT2Q96AC1 680 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 DCAF5Q96JK2 942 aa11.74□□□□□ -0.53
SCN10A-201ENST00000449082 ATP8B2P98198 1209 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms