RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 TLR7Q9NYK1 1049 aaKnown RBP20.35■□□□□ 0.85
TOM1-210ENST00000449058 ARFGEF2Q9Y6D5 1785 aa20.35■□□□□ 0.85
TOM1-210ENST00000449058 EPHA10Q5JZY3 1008 aa20.35■□□□□ 0.85
TOM1-210ENST00000449058 USP48Q86UV5 1035 aa20.35■□□□□ 0.85
TOM1-210ENST00000449058 MAP4K1Q92918 833 aa20.35■□□□□ 0.85
TOM1-210ENST00000449058 MYD88Q99836 296 aa20.35■□□□□ 0.85
TOM1-210ENST00000449058 PDRG1Q9NUG6 133 aa20.35■□□□□ 0.85
TOM1-210ENST00000449058 LARGE1O95461 756 aa20.34■□□□□ 0.85
TOM1-210ENST00000449058 ATF3P18847 181 aa20.34■□□□□ 0.85
TOM1-210ENST00000449058 SYT1P21579 422 aa20.34■□□□□ 0.85
TOM1-210ENST00000449058 NMIQ13287 307 aaPredicted RBP20.34■□□□□ 0.85
TOM1-210ENST00000449058 SYAP1Q96A49 352 aaPredicted RBP20.34■□□□□ 0.85
TOM1-210ENST00000449058 DCAF5Q96JK2 942 aa20.34■□□□□ 0.85
TOM1-210ENST00000449058 ZSCAN31Q96LW9 406 aaPredicted RBP20.34■□□□□ 0.85
TOM1-210ENST00000449058 FAM227BQ96M60 508 aa20.34■□□□□ 0.85
TOM1-210ENST00000449058 LARP6Q9BRS8 491 aaKnown RBP20.34■□□□□ 0.85
TOM1-210ENST00000449058 CYP46A1Q9Y6A2 500 aa20.34■□□□□ 0.85
TOM1-210ENST00000449058 GLI3P10071 1580 aa20.34■□□□□ 0.85
TOM1-210ENST00000449058 STX6O43752 255 aa20.34■□□□□ 0.85
TOM1-210ENST00000449058 GADD45BO75293 160 aaPredicted RBP20.34■□□□□ 0.85
TOM1-210ENST00000449058 SNRPA1P09661 255 aaKnown RBP20.34■□□□□ 0.85
TOM1-210ENST00000449058 HS1BP3Q53T59 392 aa20.34■□□□□ 0.85
TOM1-210ENST00000449058 SIL1Q9H173 461 aa20.34■□□□□ 0.85
TOM1-210ENST00000449058 SMC3Q9UQE7 1217 aa20.34■□□□□ 0.85
TOM1-210ENST00000449058 RBM8AQ9Y5S9 174 aaKnown RBP20.34■□□□□ 0.85
TOM1-210ENST00000449058 COL15A1P39059 1388 aa20.34■□□□□ 0.85
TOM1-210ENST00000449058 LAMB4A4D0S4 1761 aa20.33■□□□□ 0.85
TOM1-210ENST00000449058 ANKRD13DQ6ZTN6 518 aa20.33■□□□□ 0.85
TOM1-210ENST00000449058 ZSCAN30Q86W11 494 aa20.33■□□□□ 0.85
TOM1-210ENST00000449058 DDX17Q92841 729 aaKnown RBP20.33■□□□□ 0.85
TOM1-210ENST00000449058 GDPD2Q9HCC8 539 aa20.33■□□□□ 0.85
TOM1-210ENST00000449058 SH2B1Q9NRF2 756 aaPredicted RBP20.33■□□□□ 0.85
TOM1-210ENST00000449058 USP16Q9Y5T5 823 aa20.33■□□□□ 0.85
TOM1-210ENST00000449058 TMEM94Q12767 1356 aa20.33■□□□□ 0.85
TOM1-210ENST00000449058 PARP4Q9UKK3 1724 aaKnown RBP20.33■□□□□ 0.84
TOM1-210ENST00000449058 CYP27B1O15528 508 aa20.32■□□□□ 0.84
TOM1-210ENST00000449058 KLHDC4Q8TBB5 520 aa20.32■□□□□ 0.84
TOM1-210ENST00000449058 COPRSQ9NQ92 184 aa20.32■□□□□ 0.84
TOM1-210ENST00000449058 ZKSCAN1P17029 563 aaPredicted RBP20.32■□□□□ 0.84
TOM1-210ENST00000449058 FOXD4L6Q3SYB3 417 aaPredicted RBP20.32■□□□□ 0.84
TOM1-210ENST00000449058 CREB3L3Q68CJ9 461 aa20.32■□□□□ 0.84
TOM1-210ENST00000449058 FOXD4L3Q6VB84 417 aaPredicted RBP20.32■□□□□ 0.84
TOM1-210ENST00000449058 TNS3Q68CZ2 1445 aa20.32■□□□□ 0.84
TOM1-210ENST00000449058 MED23Q9ULK4 1368 aa20.32■□□□□ 0.84
TOM1-210ENST00000449058 JCADQ9P266 1359 aa20.31■□□□□ 0.84
TOM1-210ENST00000449058 RFX5P48382 616 aaPredicted RBP20.31■□□□□ 0.84
TOM1-210ENST00000449058 TTC5Q8N0Z6 440 aa20.31■□□□□ 0.84
TOM1-210ENST00000449058 BOLA2Q9H3K6 86 aa20.31■□□□□ 0.84
TOM1-210ENST00000449058 F13A1P00488 732 aa20.3■□□□□ 0.84
TOM1-210ENST00000449058 CSB-PGBD3P0DP91 1061 aa20.3■□□□□ 0.84
TOM1-210ENST00000449058 FMNL2Q96PY5 1086 aa20.3■□□□□ 0.84
TOM1-210ENST00000449058 A0A0D9SFI3 127 aa20.3■□□□□ 0.84
TOM1-210ENST00000449058 RABL6Q3YEC7 729 aaPredicted RBP20.3■□□□□ 0.84
TOM1-210ENST00000449058 SLC27A2O14975 620 aa20.29■□□□□ 0.84
TOM1-210ENST00000449058 ST3GAL1Q11201 340 aa20.29■□□□□ 0.84
TOM1-210ENST00000449058 CCDC83Q8IWF9 413 aa20.29■□□□□ 0.84
TOM1-210ENST00000449058 CABLES1Q8TDN4 633 aa20.29■□□□□ 0.84
TOM1-210ENST00000449058 FSD1Q9BTV5 496 aa20.29■□□□□ 0.84
TOM1-210ENST00000449058 CNPY2Q9Y2B0 182 aa20.29■□□□□ 0.84
TOM1-210ENST00000449058 PHF14O94880 888 aa20.29■□□□□ 0.84
TOM1-210ENST00000449058 TSPY26PQ9H489 355 aa20.29■□□□□ 0.84
TOM1-210ENST00000449058 GJB2P29033 226 aa20.28■□□□□ 0.84
TOM1-210ENST00000449058 ATP6V1DQ9Y5K8 247 aa20.28■□□□□ 0.84
TOM1-210ENST00000449058 CPDO75976 1380 aa20.28■□□□□ 0.84
TOM1-210ENST00000449058 PTPN12Q05209 780 aaKnown RBP20.28■□□□□ 0.84
TOM1-210ENST00000449058 CHRNA2Q15822 529 aa20.28■□□□□ 0.84
TOM1-210ENST00000449058 ME3Q16798 604 aa20.28■□□□□ 0.84
TOM1-210ENST00000449058 PSMA5P28066 241 aa20.27■□□□□ 0.84
TOM1-210ENST00000449058 KCNJ4P48050 445 aa20.27■□□□□ 0.84
TOM1-210ENST00000449058 ATP5JP18859 108 aa20.27■□□□□ 0.83
TOM1-210ENST00000449058 NAP1L5Q96NT1 182 aaPredicted RBP20.27■□□□□ 0.83
TOM1-210ENST00000449058 MTMR6Q9Y217 621 aa20.27■□□□□ 0.83
TOM1-210ENST00000449058 PIP4K2AP48426 406 aaPredicted RBP20.26■□□□□ 0.83
TOM1-210ENST00000449058 ALDH8A1Q9H2A2 487 aaPredicted RBP20.26■□□□□ 0.83
TOM1-210ENST00000449058 DBNLQ9UJU6 430 aaKnown RBP20.26■□□□□ 0.83
TOM1-210ENST00000449058 SPATA31A3Q5VYP0 1347 aa20.26■□□□□ 0.83
TOM1-210ENST00000449058 CASP7P55210 303 aa20.26■□□□□ 0.83
TOM1-210ENST00000449058 UBE2HP62256 183 aa20.26■□□□□ 0.83
TOM1-210ENST00000449058 TNNI3KQ59H18 835 aa20.26■□□□□ 0.83
TOM1-210ENST00000449058 RNF20Q5VTR2 975 aa20.26■□□□□ 0.83
TOM1-210ENST00000449058 UBE3BQ7Z3V4 1068 aa20.26■□□□□ 0.83
TOM1-210ENST00000449058 TPCN1Q9ULQ1 816 aa20.26■□□□□ 0.83
TOM1-210ENST00000449058 FPGT-TNNI3KV9GXZ4 949 aa20.26■□□□□ 0.83
TOM1-210ENST00000449058 CABP4P57796 275 aa20.25■□□□□ 0.83
TOM1-210ENST00000449058 TSGA10IPQ3SY00 556 aa20.25■□□□□ 0.83
TOM1-210ENST00000449058 PLBD2Q8NHP8 589 aa20.25■□□□□ 0.83
TOM1-210ENST00000449058 NOL7Q9UMY1 257 aaKnown RBP20.25■□□□□ 0.83
TOM1-210ENST00000449058 RFX7Q2KHR2 1363 aa20.25■□□□□ 0.83
TOM1-210ENST00000449058 CADPS2Q86UW7 1296 aa20.24■□□□□ 0.83
TOM1-210ENST00000449058 DDX54Q8TDD1 881 aaKnown RBP20.24■□□□□ 0.83
TOM1-210ENST00000449058 JARID2Q92833 1246 aaPredicted RBP20.24■□□□□ 0.83
TOM1-210ENST00000449058 UBR2Q8IWV8 1755 aa20.24■□□□□ 0.83
TOM1-210ENST00000449058 TFCP2Q12800 502 aa20.24■□□□□ 0.83
TOM1-210ENST00000449058 COL9A3Q14050 684 aaPredicted RBP20.24■□□□□ 0.83
TOM1-210ENST00000449058 CCDC183Q5T5S1 534 aa20.24■□□□□ 0.83
TOM1-210ENST00000449058 ZNF589Q86UQ0 364 aaPredicted RBP20.24■□□□□ 0.83
TOM1-210ENST00000449058 NUP188Q5SRE5 1749 aa20.24■□□□□ 0.83
TOM1-210ENST00000449058 USPL1Q5W0Q7 1092 aa20.23■□□□□ 0.83
TOM1-210ENST00000449058 RNF214Q8ND24 703 aa20.23■□□□□ 0.83
TOM1-210ENST00000449058 HMG20BQ9P0W2 317 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms