RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 C9orf131Q5VYM1 1079 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 MIER1Q8N108 512 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 RILPL2Q969X0 211 aa6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 DNAJC2Q99543 621 aaKnown RBP6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 PIP4K2AP48426 406 aaPredicted RBP6.78□□□□□ -1.32
CDC42BPA-209ENST00000448940 ADGRB3O60242 1522 aa6.77□□□□□ -1.32
CDC42BPA-209ENST00000448940 RRP12Q5JTH9 1297 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 HACL1Q9UJ83 578 aa6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 IDH1O75874 414 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 ZNF76P36508 570 aa6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 GSTO1P78417 241 aa6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 DLGAP5Q15398 846 aa6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 L1TD1Q5T7N2 865 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 FAM200AQ8TCP9 573 aa6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 FKBP4Q02790 459 aaKnown RBP eCLIP6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 TAF12Q16514 161 aa6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 FNBP4Q8N3X1 1017 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 UPF1Q92900 1129 aaKnown RBP eCLIP6.77□□□□□ -1.332e-6■■□□□ 12.6
CDC42BPA-209ENST00000448940 FHDC1Q9C0D6 1143 aaPredicted RBP6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 IFT57Q9NWB7 429 aa6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 ASAP1Q9ULH1 1129 aa6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 SUPT20HL1Q3ZLR7 823 aa6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 FOXD4L1Q9NU39 408 aa6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 CLTCQ00610 1675 aaKnown RBP6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 PRR36Q9H6K5 1346 aa6.77□□□□□ -1.33
CDC42BPA-209ENST00000448940 LRSAM1Q6UWE0 723 aa6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 TMC4Q7Z404 712 aa6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 ANXA1P04083 346 aa6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 A1BGP04217 495 aa6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 ILDR2Q71H61 639 aa6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 TSR2Q969E8 191 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 KCNH4Q9UQ05 1017 aa6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 USP6P35125 1406 aa6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 ZFYVE9O95405 1425 aa6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 FER1L4A9Z1Z3 1794 aa6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 C21orf2O43822 256 aa6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 TRIM21P19474 475 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 INSRP06213 1382 aa6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 SRGAP3O43295 1099 aa6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 DGKZQ13574 1117 aa6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 IRX6P78412 446 aaPredicted RBP6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 RNF17Q9BXT8 1623 aaKnown RBP6.76□□□□□ -1.33
CDC42BPA-209ENST00000448940 ZBBXA8MT70 800 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 MKNK2Q9HBH9 465 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 MAP3K12Q12852 859 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 GRIPAP1Q4V328 841 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 COA7Q96BR5 231 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 ZNF496Q96IT1 587 aaPredicted RBP6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 MAP3K2Q9Y2U5 619 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 KIF3AQ9Y496 699 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 IREB2P48200 963 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 CTCFP49711 727 aaPredicted RBP6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 CEP89Q96ST8 783 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 FSD1Q9BTV5 496 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 MAST3O60307 1309 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 CELF2O95319 508 aaKnown RBP6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 IL6STP40189 918 aaPredicted RBP6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 A0A0G2JLW4 131 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 NPR1P16066 1061 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 HUNKP57058 714 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 USP48Q86UV5 1035 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 HCLS1P14317 486 aaPredicted RBP6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 SREBF2Q12772 1141 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 CCDC96Q2M329 555 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 PPP4R3AQ6IN85 833 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 WDR63Q8IWG1 891 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 MASTLQ96GX5 879 aa6.75□□□□□ -1.33
CDC42BPA-209ENST00000448940 BLMP54132 1417 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 PNMA8AQ86V59 439 aaPredicted RBP6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 MICAL1Q8TDZ2 1067 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 RTL1A6NKG5 1358 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 PI4KAP2A4QPH2 592 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 CIAPIN1Q6FI81 312 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 PI4KAP1Q8N8J0 262 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 PICALMQ13492 652 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 MVPQ14764 893 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 CCDC34Q96HJ3 373 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 TDO2P48775 406 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 ANKRD45Q5TZF3 282 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 PIGBQ92521 554 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 PAGR1Q9BTK6 254 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 SYNMO15061 1565 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 RPS8P62241 208 aaKnown RBP6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 DEFB115Q30KQ5 88 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 FLIIQ13045 1269 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 DCAF15Q66K64 600 aa6.74□□□□□ -1.33
CDC42BPA-209ENST00000448940 KIF28PB7ZC32 967 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 ZKSCAN1P17029 563 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 MARCH10Q8NA82 808 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 DDX21Q9NR30 783 aaKnown RBP eCLIP6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 BBOX1O75936 387 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 IGFBP4P22692 258 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 GCC1Q96CN9 775 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 CHPF2Q9P2E5 772 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 PLCG2P16885 1265 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 MLLT1Q03111 559 aaPredicted RBP6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 RNF20Q5VTR2 975 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 CREBRFQ8IUR6 639 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 CPLX1O14810 134 aa6.73□□□□□ -1.33
CDC42BPA-209ENST00000448940 CT47B1P0C2W7 299 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 188.1 ms