RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 COL24A1Q17RW2 1714 aa18.32■□□□□ 0.52
APP-210ENST00000448850 UTYO14607 1347 aa18.31■□□□□ 0.52
APP-210ENST00000448850 NBPF7P0C2Y1 421 aaPredicted RBP18.31■□□□□ 0.52
APP-210ENST00000448850 UBTFL1P0CB47 393 aaPredicted RBP18.3■□□□□ 0.52
APP-210ENST00000448850 NLRP10Q86W26 655 aa18.3■□□□□ 0.52
APP-210ENST00000448850 PNPLA7Q6ZV29 1317 aa18.3■□□□□ 0.52
APP-210ENST00000448850 COL23A1Q86Y22 540 aaPredicted RBP18.3■□□□□ 0.52
APP-210ENST00000448850 C1orf115Q9H7X2 142 aa18.3■□□□□ 0.52
APP-210ENST00000448850 NIP7Q9Y221 180 aaKnown RBP eCLIP18.3■□□□□ 0.52
APP-210ENST00000448850 UBN2Q6ZU65 1347 aa18.29■□□□□ 0.52
APP-210ENST00000448850 GNAI2P04899 355 aa18.29■□□□□ 0.52
APP-210ENST00000448850 PARP10Q53GL7 1025 aa18.29■□□□□ 0.52
APP-210ENST00000448850 CASZ1Q86V15 1759 aa18.29■□□□□ 0.52
APP-210ENST00000448850 H7C1W4 665 aa18.28■□□□□ 0.52
APP-210ENST00000448850 PCDHB15Q9Y5E8 787 aa18.28■□□□□ 0.52
APP-210ENST00000448850 LAMB2P55268 1798 aa18.28■□□□□ 0.52
APP-210ENST00000448850 GYS1P13807 737 aa18.28■□□□□ 0.52
APP-210ENST00000448850 TBC1D9BQ66K14 1250 aa18.28■□□□□ 0.52
APP-210ENST00000448850 HDAC5Q9UQL6 1122 aa18.28■□□□□ 0.52
APP-210ENST00000448850 MSH5O43196 834 aa18.27■□□□□ 0.52
APP-210ENST00000448850 UBE3BQ7Z3V4 1068 aa18.27■□□□□ 0.52
APP-210ENST00000448850 LRRFIP2Q9Y608 721 aaKnown RBP18.27■□□□□ 0.52
APP-210ENST00000448850 DDX60Q8IY21 1712 aaKnown RBP18.26■□□□□ 0.51
APP-210ENST00000448850 PCCAP05165 728 aaPredicted RBP18.26■□□□□ 0.51
APP-210ENST00000448850 CASP7P55210 303 aa18.26■□□□□ 0.51
APP-210ENST00000448850 JARID2Q92833 1246 aaPredicted RBP18.26■□□□□ 0.51
APP-210ENST00000448850 CCDC136Q96JN2 1154 aa18.26■□□□□ 0.51
APP-210ENST00000448850 SUSD4Q5VX71 490 aa18.26■□□□□ 0.51
APP-210ENST00000448850 BICDL1Q6ZP65 573 aa18.26■□□□□ 0.51
APP-210ENST00000448850 PPP1R42Q7Z4L9 355 aa18.26■□□□□ 0.51
APP-210ENST00000448850 ZBTB38Q8NAP3 1195 aaPredicted RBP18.26■□□□□ 0.51
APP-210ENST00000448850 SETDB2Q96T68 719 aa18.26■□□□□ 0.51
APP-210ENST00000448850 TRMT112Q9UI30 125 aaKnown RBP18.26■□□□□ 0.51
APP-210ENST00000448850 RTL5Q5HYW3 569 aaPredicted RBP18.24■□□□□ 0.51
APP-210ENST00000448850 B4GALNT3Q6L9W6 998 aa18.24■□□□□ 0.51
APP-210ENST00000448850 RPAP2Q8IXW5 612 aaPredicted RBP18.24■□□□□ 0.51
APP-210ENST00000448850 FAM89AQ96GI7 184 aa18.24■□□□□ 0.51
APP-210ENST00000448850 SUCLG2Q96I99 432 aa18.24■□□□□ 0.51
APP-210ENST00000448850 UTP14AQ9BVJ6 771 aaKnown RBP18.24■□□□□ 0.51
APP-210ENST00000448850 CEP85Q6P2H3 762 aa18.23■□□□□ 0.51
APP-210ENST00000448850 KAZALD1Q96I82 304 aa18.23■□□□□ 0.51
APP-210ENST00000448850 CDHR2Q9BYE9 1310 aa18.23■□□□□ 0.51
APP-210ENST00000448850 FAM177BA6PVY3 158 aa18.23■□□□□ 0.51
APP-210ENST00000448850 NTSR2O95665 410 aa18.23■□□□□ 0.51
APP-210ENST00000448850 NFIXQ14938 502 aa18.23■□□□□ 0.51
APP-210ENST00000448850 ANKRD44Q8N8A2 993 aa18.23■□□□□ 0.51
APP-210ENST00000448850 NLGN1Q8N2Q7 840 aa18.22■□□□□ 0.51
APP-210ENST00000448850 SH3TC1Q8TE82 1336 aa18.22■□□□□ 0.51
APP-210ENST00000448850 CARMIL3Q8ND23 1372 aa18.22■□□□□ 0.51
APP-210ENST00000448850 TM4SF1P30408 202 aa18.21■□□□□ 0.51
APP-210ENST00000448850 ATP8B2P98198 1209 aa18.21■□□□□ 0.51
APP-210ENST00000448850 SIRT2Q8IXJ6 389 aa18.21■□□□□ 0.51
APP-210ENST00000448850 SYNE4Q8N205 404 aa18.21■□□□□ 0.51
APP-210ENST00000448850 BICC1Q9H694 974 aaKnown RBP18.21■□□□□ 0.51
APP-210ENST00000448850 EPHA10Q5JZY3 1008 aa18.21■□□□□ 0.51
APP-210ENST00000448850 NYXQ9GZU5 481 aa18.21■□□□□ 0.51
APP-210ENST00000448850 RWDD1Q9H446 243 aaPredicted RBP18.21■□□□□ 0.51
APP-210ENST00000448850 NRXN2Q9P2S2 1712 aa18.2■□□□□ 0.5
APP-210ENST00000448850 HDAC1Q13547 482 aaPredicted RBP18.2■□□□□ 0.5
APP-210ENST00000448850 NBPF5PQ86XG9 351 aaPredicted RBP18.2■□□□□ 0.5
APP-210ENST00000448850 PLA2G12BQ9BX93 195 aa18.2■□□□□ 0.5
APP-210ENST00000448850 IRS4O14654 1257 aaPredicted RBP18.19■□□□□ 0.5
APP-210ENST00000448850 IGHDP01880 384 aa18.19■□□□□ 0.5
APP-210ENST00000448850 MTX1Q13505 466 aa18.19■□□□□ 0.5
APP-210ENST00000448850 TPTE2Q6XPS3 522 aa18.19■□□□□ 0.5
APP-210ENST00000448850 FOXO4P98177 505 aa18.19■□□□□ 0.5
APP-210ENST00000448850 RABL6Q3YEC7 729 aaPredicted RBP18.19■□□□□ 0.5
APP-210ENST00000448850 NUTM1Q86Y26 1132 aa18.19■□□□□ 0.5
APP-210ENST00000448850 PNMA6EA0A0J9YXQ4 647 aa18.18■□□□□ 0.5
APP-210ENST00000448850 HMMRO75330 724 aa18.18■□□□□ 0.5
APP-210ENST00000448850 GTF2E1P29083 439 aaPredicted RBP18.18■□□□□ 0.5
APP-210ENST00000448850 PDGFDQ9GZP0 370 aaPredicted RBP18.18■□□□□ 0.5
APP-210ENST00000448850 PDE8AO60658 829 aa18.17■□□□□ 0.5
APP-210ENST00000448850 HSP90B1P14625 803 aaKnown RBP18.17■□□□□ 0.5
APP-210ENST00000448850 ERFEQ4G0M1 354 aa18.17■□□□□ 0.5
APP-210ENST00000448850 POLRMTO00411 1230 aaKnown RBP18.16■□□□□ 0.5
APP-210ENST00000448850 SRGAP3O43295 1099 aa18.16■□□□□ 0.5
APP-210ENST00000448850 SERPINB2P05120 415 aa18.16■□□□□ 0.5
APP-210ENST00000448850 DDR1Q08345 913 aa18.16■□□□□ 0.5
APP-210ENST00000448850 LMBR1LQ6UX01 489 aa18.16■□□□□ 0.5
APP-210ENST00000448850 SSH3Q8TE77 659 aa18.16■□□□□ 0.5
APP-210ENST00000448850 SLC16A10Q8TF71 515 aa18.16■□□□□ 0.5
APP-210ENST00000448850 KDM2BQ8NHM5 1336 aa18.16■□□□□ 0.5
APP-210ENST00000448850 HCLS1P14317 486 aaPredicted RBP18.16■□□□□ 0.5
APP-210ENST00000448850 POLA2Q14181 598 aa18.16■□□□□ 0.5
APP-210ENST00000448850 SLC10A5Q5PT55 438 aa18.16■□□□□ 0.5
APP-210ENST00000448850 MSL1Q68DK7 614 aa18.16■□□□□ 0.5
APP-210ENST00000448850 ANKRD31Q8N7Z5 1873 aa18.16■□□□□ 0.5
APP-210ENST00000448850 CENPQQ7L2Z9 268 aaPredicted RBP18.15■□□□□ 0.5
APP-210ENST00000448850 CNBD1Q8NA66 436 aa18.15■□□□□ 0.5
APP-210ENST00000448850 TAF1P21675 1872 aa18.15■□□□□ 0.5
APP-210ENST00000448850 ABCC12Q96J65 1359 aa18.15■□□□□ 0.5
APP-210ENST00000448850 TNRC6CQ9HCJ0 1690 aaKnown RBP18.14■□□□□ 0.5
APP-210ENST00000448850 NPHP1O15259 732 aa18.14■□□□□ 0.5
APP-210ENST00000448850 CSF1RP07333 972 aa18.14■□□□□ 0.5
APP-210ENST00000448850 MMP10P09238 476 aa18.14■□□□□ 0.5
APP-210ENST00000448850 SPEF2Q9C093 1822 aa18.14■□□□□ 0.49
APP-210ENST00000448850 CTSWP56202 376 aa18.14■□□□□ 0.49
APP-210ENST00000448850 R3HDM1Q15032 1099 aaKnown RBP18.14■□□□□ 0.49
APP-210ENST00000448850 PRR5LQ6MZQ0 368 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms