RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 PYCARDQ9ULZ3 195 aa16.35■□□□□ 0.21
POLR1B-209ENST00000448770 CYP46A1Q9Y6A2 500 aa16.35■□□□□ 0.21
POLR1B-209ENST00000448770 LIG1P18858 919 aa16.34■□□□□ 0.21
POLR1B-209ENST00000448770 TEFQ10587 303 aa16.34■□□□□ 0.21
POLR1B-209ENST00000448770 MYRIPQ8NFW9 859 aa16.34■□□□□ 0.21
POLR1B-209ENST00000448770 KLHDC4Q8TBB5 520 aa16.34■□□□□ 0.21
POLR1B-209ENST00000448770 C9orf78Q9NZ63 289 aaPredicted RBP16.34■□□□□ 0.21
POLR1B-209ENST00000448770 SLC27A2O14975 620 aa16.34■□□□□ 0.21
POLR1B-209ENST00000448770 GIGYF1O75420 1035 aaPredicted RBP16.34■□□□□ 0.21
POLR1B-209ENST00000448770 IFIT2P09913 472 aaKnown RBP16.34■□□□□ 0.21
POLR1B-209ENST00000448770 PLCB2Q00722 1185 aa16.34■□□□□ 0.21
POLR1B-209ENST00000448770 BICC1Q9H694 974 aaKnown RBP16.34■□□□□ 0.21
POLR1B-209ENST00000448770 CHMP3Q9Y3E7 222 aa16.34■□□□□ 0.21
POLR1B-209ENST00000448770 CHGBP05060 677 aa16.33■□□□□ 0.2
POLR1B-209ENST00000448770 ZNF589Q86UQ0 364 aaPredicted RBP16.33■□□□□ 0.2
POLR1B-209ENST00000448770 MAP4K1Q92918 833 aa16.33■□□□□ 0.2
POLR1B-209ENST00000448770 EDC3Q96F86 508 aaKnown RBP16.33■□□□□ 0.2
POLR1B-209ENST00000448770 DBF4Q9UBU7 674 aaPredicted RBP16.33■□□□□ 0.2
POLR1B-209ENST00000448770 PHF8Q9UPP1 1060 aa16.33■□□□□ 0.2
POLR1B-209ENST00000448770 HEG1Q9ULI3 1381 aa16.33■□□□□ 0.2
POLR1B-209ENST00000448770 RNMTO43148 476 aaKnown RBP16.33■□□□□ 0.2
POLR1B-209ENST00000448770 AKAP4Q5JQC9 854 aa16.33■□□□□ 0.2
POLR1B-209ENST00000448770 RUFY2Q8WXA3 655 aa16.33■□□□□ 0.2
POLR1B-209ENST00000448770 EVI5LQ96CN4 794 aa16.33■□□□□ 0.2
POLR1B-209ENST00000448770 SPTLC3Q9NUV7 552 aa16.33■□□□□ 0.2
POLR1B-209ENST00000448770 CHD2O14647 1828 aaKnown RBP16.33■□□□□ 0.2
POLR1B-209ENST00000448770 LETM1O95202 739 aaPredicted RBP16.32■□□□□ 0.2
POLR1B-209ENST00000448770 KSR2Q6VAB6 950 aa16.32■□□□□ 0.2
POLR1B-209ENST00000448770 SH2B1Q9NRF2 756 aaPredicted RBP16.32■□□□□ 0.2
POLR1B-209ENST00000448770 COL15A1P39059 1388 aa16.32■□□□□ 0.2
POLR1B-209ENST00000448770 DNTTIP2Q5QJE6 756 aaKnown RBP16.31■□□□□ 0.2
POLR1B-209ENST00000448770 SIL1Q9H173 461 aa16.31■□□□□ 0.2
POLR1B-209ENST00000448770 ALDH1L1O75891 902 aa16.31■□□□□ 0.2
POLR1B-209ENST00000448770 TOB2Q14106 344 aaPredicted RBP16.31■□□□□ 0.2
POLR1B-209ENST00000448770 CAMK4Q16566 473 aa16.31■□□□□ 0.2
POLR1B-209ENST00000448770 SPC24Q8NBT2 197 aa16.31■□□□□ 0.2
POLR1B-209ENST00000448770 ZSCAN31Q96LW9 406 aaPredicted RBP16.31■□□□□ 0.2
POLR1B-209ENST00000448770 BOLA2Q9H3K6 86 aa16.31■□□□□ 0.2
POLR1B-209ENST00000448770 ATP6V1DQ9Y5K8 247 aa16.31■□□□□ 0.2
POLR1B-209ENST00000448770 MED23Q9ULK4 1368 aa16.3■□□□□ 0.2
POLR1B-209ENST00000448770 IGKV5-2P06315 115 aa16.3■□□□□ 0.2
POLR1B-209ENST00000448770 EPHA10Q5JZY3 1008 aa16.3■□□□□ 0.2
POLR1B-209ENST00000448770 LARP1BQ659C4 914 aaKnown RBP16.3■□□□□ 0.2
POLR1B-209ENST00000448770 SNRKQ9NRH2 765 aa16.3■□□□□ 0.2
POLR1B-209ENST00000448770 GRM8O00222 908 aa16.29■□□□□ 0.2
POLR1B-209ENST00000448770 AIMP1Q12904 312 aaKnown RBP16.29■□□□□ 0.2
POLR1B-209ENST00000448770 PDIA6Q15084 440 aa16.29■□□□□ 0.2
POLR1B-209ENST00000448770 MRVI1Q9Y6F6 885 aa16.29■□□□□ 0.2
POLR1B-209ENST00000448770 LARP1Q6PKG0 1096 aaKnown RBP16.29■□□□□ 0.2
POLR1B-209ENST00000448770 KIAA1524Q8TCG1 905 aa16.29■□□□□ 0.2
POLR1B-209ENST00000448770 MAP7D2Q96T17 732 aa16.29■□□□□ 0.2
POLR1B-209ENST00000448770 NDUFB9Q9Y6M9 179 aa16.29■□□□□ 0.2
POLR1B-209ENST00000448770 LUZP1Q86V48 1076 aa16.28■□□□□ 0.2
POLR1B-209ENST00000448770 UTYO14607 1347 aa16.28■□□□□ 0.2
POLR1B-209ENST00000448770 KCNJ4P48050 445 aa16.28■□□□□ 0.2
POLR1B-209ENST00000448770 STK3Q13188 491 aa16.28■□□□□ 0.2
POLR1B-209ENST00000448770 CKAP2LQ8IYA6 745 aa16.28■□□□□ 0.2
POLR1B-209ENST00000448770 TFIP11Q9UBB9 837 aaKnown RBP16.28■□□□□ 0.2
POLR1B-209ENST00000448770 SIPA1L3O60292 1781 aaPredicted RBP16.28■□□□□ 0.2
POLR1B-209ENST00000448770 NCAPD2Q15021 1401 aa16.28■□□□□ 0.2
POLR1B-209ENST00000448770 JCADQ9P266 1359 aa16.27■□□□□ 0.2
POLR1B-209ENST00000448770 ZKSCAN1P17029 563 aaPredicted RBP16.27■□□□□ 0.2
POLR1B-209ENST00000448770 ERC1Q8IUD2 1116 aa16.27■□□□□ 0.2
POLR1B-209ENST00000448770 THEMISQ8N1K5 641 aaPredicted RBP16.27■□□□□ 0.2
POLR1B-209ENST00000448770 GPATCH3Q96I76 525 aa16.27■□□□□ 0.2
POLR1B-209ENST00000448770 PHRF1Q9P1Y6 1649 aaKnown RBP16.27■□□□□ 0.19
POLR1B-209ENST00000448770 JAK2O60674 1132 aa16.27■□□□□ 0.19
POLR1B-209ENST00000448770 RPS6KB1P23443 525 aa16.27■□□□□ 0.19
POLR1B-209ENST00000448770 GTF2F1P35269 517 aaKnown RBP eCLIP16.27■□□□□ 0.19
POLR1B-209ENST00000448770 LINS1Q8NG48 757 aa16.27■□□□□ 0.19
POLR1B-209ENST00000448770 TYRO3Q06418 890 aa16.26■□□□□ 0.19
POLR1B-209ENST00000448770 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
POLR1B-209ENST00000448770 FSD1Q9BTV5 496 aa16.26■□□□□ 0.19
POLR1B-209ENST00000448770 C5P01031 1676 aa16.26■□□□□ 0.19
POLR1B-209ENST00000448770 KRT85P78386 507 aa16.26■□□□□ 0.19
POLR1B-209ENST00000448770 PRIMPOLQ96LW4 560 aa16.26■□□□□ 0.19
POLR1B-209ENST00000448770 DACT1Q9NYF0 836 aa16.26■□□□□ 0.19
POLR1B-209ENST00000448770 AXIN2Q9Y2T1 843 aa16.26■□□□□ 0.19
POLR1B-209ENST00000448770 ZNF142P52746 1687 aaPredicted RBP16.26■□□□□ 0.19
POLR1B-209ENST00000448770 MRC1P22897 1456 aa16.25■□□□□ 0.19
POLR1B-209ENST00000448770 CCDC192P0DO97 292 aa16.25■□□□□ 0.19
POLR1B-209ENST00000448770 PTGS1P23219 599 aa16.25■□□□□ 0.19
POLR1B-209ENST00000448770 HMGN5P82970 282 aaKnown RBP16.25■□□□□ 0.19
POLR1B-209ENST00000448770 BLOC1S2Q6QNY1 142 aa16.25■□□□□ 0.19
POLR1B-209ENST00000448770 PGBD1Q96JS3 809 aa16.25■□□□□ 0.19
POLR1B-209ENST00000448770 NUP62CLQ9H1M0 184 aa16.25■□□□□ 0.19
POLR1B-209ENST00000448770 SLC39A6Q13433 755 aa16.25■□□□□ 0.19
POLR1B-209ENST00000448770 ELP1O95163 1332 aa16.24■□□□□ 0.19
POLR1B-209ENST00000448770 TAF5LO75529 589 aa16.24■□□□□ 0.19
POLR1B-209ENST00000448770 G3BP1Q13283 466 aaKnown RBP eCLIP16.24■□□□□ 0.192e-7■□□□□ 10.7
POLR1B-209ENST00000448770 ESCO1Q5FWF5 840 aa16.24■□□□□ 0.19
POLR1B-209ENST00000448770 CCDC129Q6ZRS4 1044 aa16.24■□□□□ 0.19
POLR1B-209ENST00000448770 FAM200AQ8TCP9 573 aa16.24■□□□□ 0.19
POLR1B-209ENST00000448770 LEO1Q8WVC0 666 aaPredicted RBP16.24■□□□□ 0.19
POLR1B-209ENST00000448770 PIP4K2AP48426 406 aaPredicted RBP16.24■□□□□ 0.19
POLR1B-209ENST00000448770 LRMPQ12912 555 aa16.24■□□□□ 0.19
POLR1B-209ENST00000448770 MAP3K11Q16584 847 aa16.24■□□□□ 0.19
POLR1B-209ENST00000448770 SEC62Q99442 399 aaKnown RBP16.24■□□□□ 0.19
POLR1B-209ENST00000448770 CBX8Q9HC52 389 aa16.24■□□□□ 0.19
POLR1B-209ENST00000448770 NRBP1Q9UHY1 535 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms